Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vegfab

Gene Name Gene ID Reads Annotation
vegfab ENSDARG00000034700 366 vascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]










Genes with expression patterns similar to vegfab

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vegfab ENSDARG00000034700 366 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 vascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]
2. lrch4 ENSDARG00000068258 24 1.767 0.791 0.976 - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
3. si:dkeyp-53d3.3 ENSDARG00000098664 65 1.767 0.791 0.976 - - - - - - - si:dkeyp-53d3.3 [Source:ZFIN;Acc:ZDB-GENE-050208-644]
4. mtpap ENSDARG00000076155, ENSDARG00000112828 272 1.755 0.880 - - - - - - 0.875 - mitochondrial poly(A) polymerase [Source:ZFIN;Acc:ZDB-GENE-101208-3]
5. ppwd1 ENSDARG00000063161 752 1.738 - 0.869 - - - - - 0.869 - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-16]
6. CR478286.1_1 CR478286.1_1 306 1.731 0.803 0.928 - - - - - - -
7. si:dkey-150k17.3 33 1.727 0.791 0.936 - - - - - - - si:dkey-150k17.3
8. nrg2b ENSDARG00000086585 100 1.698 0.841 - - - - - - 0.857 - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
9. si:ch211-71m22.1 ENSDARG00000058638 169 1.682 - 0.793 - - - - - 0.889 - si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
10. prmt7 ENSDARG00000051902, ENSDARG00000113277, ENSDARG00000116251 440 1.676 0.798 - - - - - - 0.878 - protein arginine methyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1560]
11. thap7 ENSDARG00000070704 225 1.67 - 0.803 - - - - - 0.867 - THAP domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040914-84]
12. trpc1 ENSDARG00000061203 62 1.666 0.791 - - - - - - 0.875 - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
13. dync1i2b ENSDARG00000103195 46 1.652 0.791 0.861 - - - - - - - dynein, cytoplasmic 1, intermediate chain 2b [Source:ZFIN;Acc:ZDB-GENE-090121-1]
14. PPFIA3 ENSDARG00000077053 310 1.65 0.853 - - - - - - 0.797 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
15. PTGER3 ENSDARG00000055781 187 1.631 0.819 0.812 - - - - - - - prostaglandin E receptor 3 (subtype EP3) [Source:ZFIN;Acc:ZDB-GENE-120508-5]
16. bmp7b ENSDARG00000063230 337 1.627 - 0.808 - 0.819 - - - - - bone morphogenetic protein 7b [Source:ZFIN;Acc:ZDB-GENE-060929-328]
17. inhbaa ENSDARG00000012671 207 1.62 - 0.742 - - - - - 0.878 - inhibin subunit beta Aa [Source:ZFIN;Acc:ZDB-GENE-000210-21]
18. GPR153 ENSDARG00000087601 48 1.615 0.732 - - - - - - 0.883 - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
19. ERBB4_1 ERBB4_1 1064 1.612 - 0.844 - - - - 0.768 - -
20. CASS4 ENSDARG00000006775 760 1.607 - - - 0.748 - - - 0.859 - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
21. si:dkey-193c22.1 ENSDARG00000093687 104 1.602 0.789 - - - - - - 0.813 - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
22. cdc40 ENSDARG00000041226 514 1.594 - 0.803 - - - - - 0.791 - cell division cycle 40 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050116-3]
23. si:dkey-15h8.15 ENSDARG00000102601 335 1.584 - 0.732 - - - - - 0.852 - si:dkey-15h8.15 [Source:ZFIN;Acc:ZDB-GENE-050208-626]
24. HMGXB4 HMGXB4 209 1.577 0.721 - - - - - - 0.856 -
25. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.564 0.808 0.756 - - - - - - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
26. AP5Z1 ENSDARG00000078111 91 1.553 0.791 - - - - - - 0.762 - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
27. senp5 ENSDARG00000060646 303 1.524 0.775 0.749 - - - - - - - SUMO specific peptidase 5 [Source:ZFIN;Acc:ZDB-GENE-050208-772]
28. dhrs7c dhrs7c 1173 1.519 - - - - - - 0.763 0.756 -
29. sspn ENSDARG00000041747, ENSDARG00000114109, ENSDARG00000114643 1228 1.507 - 0.801 - - - - 0.706 - - sarcospan (Kras oncogene-associated gene) [Source:ZFIN;Acc:ZDB-GENE-051127-43]
30. btbd6b ENSDARG00000032369, ENSDARG00000114044 692 1.497 - - - - - - 0.760 0.737 - BTB (POZ) domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-030829-65]
31. tmem229b ENSDARG00000060569 516 1.494 0.703 0.791 - - - - - - - transmembrane protein 229B [Source:ZFIN;Acc:ZDB-GENE-060929-1154]
32. ppp3cca ENSDARG00000014962, ENSDARG00000112030 1301 1.489 - - - - - - 0.747 0.742 - protein phosphatase 3, catalytic subunit, gamma isozyme, a [Source:ZFIN;Acc:ZDB-GENE-030829-36]
33. CR352225.2 CR352225.2 1138 1.48 - 0.757 - - - - 0.723 - -
34. trim63 trim63 2437 1.41 0.703 - - - - - 0.707 - -
35. usp20 ENSDARG00000027501, ENSDARG00000116822 211 1 - 1.000 - - - - - - - ubiquitin specific peptidase 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1219]
36. gpr98 gpr98 717 0.993 - 0.993 - - - - - - -
37. klf6b ENSDARG00000038561 27 0.988 - 0.988 - - - - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
38. ulk4 ENSDARG00000004176 85 0.988 - 0.988 - - - - - - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
39. ppa1a ENSDARG00000099933 31 0.987 - 0.987 - - - - - - - pyrophosphatase (inorganic) 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1695]
40. ADAM12 ENSDARG00000116062 35 0.987 - 0.987 - - - - - - - ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]
41. CU104716.2 CU104716.2 10 0.987 - 0.987 - - - - - - -
42. GFOD1 ENSDARG00000061363 67 0.987 - 0.987 - - - - - - - glucose-fructose oxidoreductase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21096]
43. si:ch211-207c6.6 si:ch211-207c6.6 32 0.987 - 0.987 - - - - - - -
44. TMEM246 ENSDARG00000061553 168 0.987 - 0.987 - - - - - - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
45. SMIM13_1 SMIM13_1 592 0.986 - 0.986 - - - - - - -
46. lygl1 ENSDARG00000056874 309 0.986 - 0.986 - - - - - - - lysozyme g-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-461]
47. slc27a6 ENSDARG00000046053 57 0.986 - 0.986 - - - - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
48. s100z ENSDARG00000038729 442 0.984 - 0.984 - - - - - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
49. hs3st1l2 ENSDARG00000035578 279 0.981 - 0.981 - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
50. TBC1D17 ENSDARG00000005927 163 0.98 - 0.980 - - - - - - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
51. tmem79b ENSDARG00000076861 154 0.978 - 0.978 - - - - - - - transmembrane protein 79b [Source:ZFIN;Acc:ZDB-GENE-120807-1]
52. rasl10a ENSDARG00000062314 207 0.978 - 0.978 - - - - - - - RAS-like, family 10, member A [Source:ZFIN;Acc:ZDB-GENE-060526-273]
53. gata4 ENSDARG00000098952 11 0.976 - 0.976 - - - - - - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
54. zgc:175008 zgc:175008 55 0.976 - 0.976 - - - - - - -
55. CR735107.1 CR735107.1 6 0.976 - 0.976 - - - - - - -
56. cadm1b ENSDARG00000042677 277 0.976 - 0.976 - - - - - - - cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-080327-34]
57. CR457462.1 CR457462.1 11 0.976 - 0.976 - - - - - - -
58. als2a ENSDARG00000075111 29 0.976 - 0.976 - - - - - - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
59. BX928744.1 BX928744.1 15 0.976 - 0.976 - - - - - - -
60. MAPKBP1 ENSDARG00000103746 4 0.976 - 0.976 - - - - - - - mitogen-activated protein kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-120207-1]
61. ms4a17a.2 ENSDARG00000105674 32 0.976 - 0.976 - - - - - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
62. si:ch211-165l15.1 si:ch211-165l15.1 10 0.976 - 0.976 - - - - - - -
63. cx32.3 ENSDARG00000041787 33 0.976 - 0.976 - - - - - - - connexin 32.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1337]
64. CMA1_8 CMA1_8 10 0.976 - 0.976 - - - - - - -
65. stx11a ENSDARG00000044039 39 0.976 - 0.976 - - - - - - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
66. cyp2k18 ENSDARG00000104593 27 0.976 - 0.976 - - - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
67. zgc:114123 ENSDARG00000044956 9 0.976 - 0.976 - - - - - - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
68. bik ENSDARG00000045549 18 0.976 - 0.976 - - - - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
69. si:dkey-229d11.5 ENSDARG00000094392 33 0.976 - 0.976 - - - - - - - si:dkey-229d11.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5342]
70. RGS14 RGS14 15 0.976 - 0.976 - - - - - - -
71. CABZ01084613.1 CABZ01084613.1 22 0.976 - 0.976 - - - - - - -
72. arsk ENSDARG00000059714, ENSDARG00000115105 31 0.976 - 0.976 - - - - - - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
73. ZNF70_14 ZNF70_14 19 0.976 - 0.976 - - - - - - -
74. IKZF4 ENSDARG00000037068 36 0.976 - 0.976 - - - - - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
75. si:dkey-233e3.1 si:dkey-233e3.1 7 0.976 - 0.976 - - - - - - -
76. si:dkey-6o1.2 si:dkey-6o1.2 12 0.976 - 0.976 - - - - - - -
77. BX537137.1 ENSDARG00000092436 77 0.976 - 0.976 - - - - - - - gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466]
78. klhl26 ENSDARG00000053876 48 0.976 - 0.976 - - - - - - - kelch-like family member 26 [Source:ZFIN;Acc:ZDB-GENE-030131-5975]
79. BX511061.2 BX511061.2 30 0.976 - 0.976 - - - - - - -
80. AL954698.1 ENSDARG00000098202 377 0.976 - 0.976 - - - - - - -
81. si:dkey-185p13.1 ENSDARG00000095837 12 0.976 - 0.976 - - - - - - - si:dkey-185p13.1 [Source:ZFIN;Acc:ZDB-GENE-110411-125]
82. BX005421.4 BX005421.4 11 0.976 - 0.976 - - - - - - -
83. slc8a1a ENSDARG00000013422 12 0.976 - 0.976 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 1a [Source:ZFIN;Acc:ZDB-GENE-050809-1]
84. shisa3 ENSDARG00000075467 485 0.976 - 0.976 - - - - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
85. PLCXD1_2 PLCXD1_2 9 0.976 - 0.976 - - - - - - -
86. si:ch211-199o1.2 ENSDARG00000056210 33 0.975 - 0.975 - - - - - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
87. AL954372.1_1 ENSDARG00000112499 57 0.975 - 0.975 - - - - - - -
88. ppp1r37 ENSDARG00000078458 49 0.975 - 0.975 - - - - - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
89. si:ch211-117c9.5 ENSDARG00000071235 154 0.975 - 0.975 - - - - - - - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
90. si:dkeyp-52c3.5 si:dkeyp-52c3.5 9 0.974 - 0.974 - - - - - - -
91. ogfrl1 ENSDARG00000061223 64 0.974 - 0.974 - - - - - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
92. nptnb ENSDARG00000043864 165 0.973 - 0.973 - - - - - - - neuroplastin b [Source:ZFIN;Acc:ZDB-GENE-040426-1821]
93. ghdc ENSDARG00000055569 83 0.972 - 0.972 - - - - - - - GH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-165]
94. dcakd ENSDARG00000061638 120 0.972 - 0.972 - - - - - - - dephospho-CoA kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-226]
95. fibinb ENSDARG00000087196, ENSDARG00000110737 53 0.971 - 0.971 - - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
96. bivm ENSDARG00000061409, ENSDARG00000111376 25 0.971 - 0.971 - - - - - - - basic, immunoglobulin-like variable motif containing [Source:ZFIN;Acc:ZDB-GENE-010822-3]
97. csdc2b 82 0.97 - 0.970 - - - - - - - cold shock domain containing C2, RNA binding b
98. zgc:92218 zgc:92218 64 0.97 - 0.970 - - - - - - -
99. gpr37b ENSDARG00000033296 283 0.968 - 0.968 - - - - - - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
100. plcd1a ENSDARG00000059123 46 0.967 - 0.967 - - - - - - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]

There are 1211 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA