Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vdrb

Gene Name Gene ID Reads Annotation
vdrb ENSDARG00000070721, ENSDARG00000114864 559 vitamin D receptor b [Source:ZFIN;Acc:ZDB-GENE-080403-10]










Genes with expression patterns similar to vdrb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vdrb ENSDARG00000070721, ENSDARG00000114864 559 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vitamin D receptor b [Source:ZFIN;Acc:ZDB-GENE-080403-10]
2. TCF24 ENSDARG00000086944 518 1.516 - - - - - 0.778 0.738 - - transcription factor 24 [Source:HGNC Symbol;Acc:HGNC:32275]
3. psmg1 ENSDARG00000040620 1359 0.923 - - - - - 0.923 - - - proteasome (prosome, macropain) assembly chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-040718-469]
4. RBM26 ENSDARG00000104130 1012 0.887 - - - - - 0.887 - - - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
5. ms4a17a.7 ENSDARG00000043796 352 0.879 - - - - - 0.879 - - - membrane-spanning 4-domains, subfamily A, member 17A.7 [Source:ZFIN;Acc:ZDB-GENE-080829-2]
6. FBLN1 ENSDARG00000103311 877 0.87 - 0.870 - - - - - - - fibulin 1 [Source:NCBI gene;Acc:30240]
7. ndufa13 160 0.868 - - - - - 0.868 - - - NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
8. C6H2orf40 C6H2orf40 4224 0.864 - 0.864 - - - - - - -
9. dclre1b ENSDARG00000068833 359 0.861 - - - - - - 0.861 - - DNA cross-link repair 1B [Source:ZFIN;Acc:ZDB-GENE-061013-328]
10. sap18 ENSDARG00000057854, ENSDARG00000110983 3132 0.858 - 0.858 - - - - - - - Sin3A-associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1679]
11. bag1 ENSDARG00000020895 1660 0.856 - 0.856 - - - - - - - BCL2 associated athanogene 1 [Source:ZFIN;Acc:ZDB-GENE-050309-89]
12. sdpra sdpra 4594 0.851 - 0.851 - - - - - - -
13. cbr1l ENSDARG00000021149 1934 0.849 - 0.849 - - - - - - - carbonyl reductase 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9642]
14. HOOK3 ENSDARG00000114329 1980 0.847 - 0.847 - - - - - - - hook microtubule tethering protein 3 [Source:HGNC Symbol;Acc:HGNC:23576]
15. cish ENSDARG00000060316 329 0.846 - - - - - - 0.846 - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
16. ncdn ENSDARG00000098544 267 0.845 - - - - - 0.845 - - - neurochondrin [Source:ZFIN;Acc:ZDB-GENE-061220-6]
17. adam15 ENSDARG00000089213 359 0.839 - - - - - - 0.839 - - ADAM metallopeptidase domain 15 [Source:ZFIN;Acc:ZDB-GENE-070809-4]
18. rfc5 ENSDARG00000035634 974 0.838 - - - - - 0.838 - - - replication factor C (activator 1) 5 [Source:ZFIN;Acc:ZDB-GENE-040907-1]
19. aldh3b1 ENSDARG00000013839 796 0.838 - 0.838 - - - - - - - aldehyde dehydrogenase 3 family, member B1 [Source:ZFIN;Acc:ZDB-GENE-021120-3]
20. chic1 ENSDARG00000053166 210 0.838 - - - - - 0.838 - - - cysteine-rich hydrophobic domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7763]
21. AP3B1 2363 0.835 - 0.835 - - - - - - - adaptor related protein complex 3 beta 1 subunit
22. fam193a ENSDARG00000102787 617 0.834 - - - - - - 0.834 - - family with sequence similarity 193, member A [Source:ZFIN;Acc:ZDB-GENE-080917-25]
23. zgc:173617 zgc:173617 114 0.834 - - - - - - 0.834 - -
24. dcps ENSDARG00000009862 571 0.833 - - - - - - 0.833 - - decapping enzyme, scavenger [Source:ZFIN;Acc:ZDB-GENE-040311-1]
25. dctd ENSDARG00000036990 2168 0.829 - 0.829 - - - - - - - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
26. nudc ENSDARG00000104837 1798 0.828 - - - - - - 0.828 - - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
27. hp_1 ENSDARG00000051890, ENSDARG00000095807 1049 0.827 0.827 - - - - - - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
28. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 0.822 0.822 - - - - - - - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
29. cicb ENSDARG00000055502 1356 0.822 - - - - - - 0.822 - - capicua transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-030131-1966]
30. cirh1a 767 0.817 - - - - - 0.817 - - - cirrhosis, autosomal recessive 1A (cirhin), transcript variant X1
31. enthd2 481 0.817 - - - - - 0.817 - - - ENTH domain containing 2
32. sec22ba ENSDARG00000030108 1273 0.817 - 0.817 - - - - - - - SEC22 homolog B, vesicle trafficking protein a [Source:ZFIN;Acc:ZDB-GENE-010724-3]
33. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 0.815 - 0.815 - - - - - - - protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
34. trappc6bl ENSDARG00000033171, ENSDARG00000111544 911 0.814 - 0.814 - - - - - - - trafficking protein particle complex 6b-like [Source:ZFIN;Acc:ZDB-GENE-040426-1602]
35. abhd14b ENSDARG00000100531 333 0.814 - - - - - 0.814 - - - abhydrolase domain containing 14B [Source:ZFIN;Acc:ZDB-GENE-040426-1342]
36. si:ch211-267e7.2 si:ch211-267e7.2 102 0.814 - - - - - 0.814 - - -
37. sardh ENSDARG00000058102, ENSDARG00000112110 2150 0.812 - 0.812 - - - - - - - sarcosine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-996]
38. CLN5 ENSDARG00000076339 377 0.809 - - - - - 0.809 - - - CLN5, intracellular trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060908-1]
39. vps37a ENSDARG00000017119, ENSDARG00000110505 772 0.809 - - - - - - 0.809 - - vacuolar protein sorting 37A [Source:ZFIN;Acc:ZDB-GENE-030131-8312]
40. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 0.808 - 0.808 - - - - - - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
41. galnt10 ENSDARG00000103825 320 0.807 - - - - - 0.807 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
42. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.807 - - - - - - 0.807 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
43. utp11l ENSDARG00000039958, ENSDARG00000109895 1509 0.807 - 0.807 - - - - - - - UTP11-like, U3 small nucleolar ribonucleoprotein (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-8093]
44. adam28 ENSDARG00000035514, ENSDARG00000109685, ENSDARG00000111244 540 0.805 - - - - - 0.805 - - - ADAM metallopeptidase domain 28 [Source:ZFIN;Acc:ZDB-GENE-060929-532]
45. ints1 ENSDARG00000100419 1958 0.805 - - - - - - 0.805 - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
46. rab18a ENSDARG00000055291, ENSDARG00000111917 2088 0.803 - 0.803 - - - - - - - RAB18A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-3980]
47. mov10a ENSDARG00000015829 566 0.803 - 0.803 - - - - - - - Mov10 RISC complex RNA helicase a [Source:ZFIN;Acc:ZDB-GENE-091230-8]
48. jund ENSDARG00000067850 744 0.801 - 0.801 - - - - - - - JunD proto-oncogene, AP-1 transcription factor subunit [Source:ZFIN;Acc:ZDB-GENE-070725-2]
49. akr7a3 ENSDARG00000016649 314 0.801 - 0.801 - - - - - - - aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-040718-62]
50. C13H10orf11 1209 0.801 - - - - - - 0.801 - - c13h10orf11 homolog (H. sapiens), transcript variant X2
51. cers2b ENSDARG00000058992 5319 0.801 - 0.801 - - - - - - - ceramide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-110408-40]
52. gnpnat1 ENSDARG00000039892 709 0.8 - 0.800 - - - - - - - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
53. HGSNAT ENSDARG00000077804 1540 0.8 - 0.800 - - - - - - - heparan-alpha-glucosaminide N-acetyltransferase [Source:ZFIN;Acc:ZDB-GENE-140106-144]
54. PDZD8 ENSDARG00000088699 844 0.799 - 0.799 - - - - - - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
55. manf ENSDARG00000063177, ENSDARG00000114083 570 0.798 - - - - - 0.798 - - - mesencephalic astrocyte-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-060929-640]
56. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 0.797 - 0.797 - - - - - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
57. irf2bp2b ENSDARG00000098635 1961 0.797 0.797 - - - - - - - - interferon regulatory factor 2 binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2574]
58. tmem161b ENSDARG00000055989 680 0.796 - - - - - - 0.796 - - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
59. tfeb ENSDARG00000010794 473 0.796 - - - - - - 0.796 - - transcription factor EB [Source:ZFIN;Acc:ZDB-GENE-090807-3]
60. g2e3 ENSDARG00000001313 1485 0.795 - - - - - - 0.795 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-400]
61. elovl1a ENSDARG00000099960 1650 0.794 - 0.794 - - - - - - - ELOVL fatty acid elongase 1a [Source:ZFIN;Acc:ZDB-GENE-041010-66]
62. CASKIN2_1 CASKIN2_1 2299 0.791 - - - - - - 0.791 - -
63. WIPF2 WIPF2 3171 0.79 0.790 - - - - - - - -
64. aco1 ENSDARG00000026376 5034 0.789 - 0.789 - - - - - - - aconitase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-031118-76]
65. U6 U6 931 0.788 - - - - - - 0.788 - -
66. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 0.788 - 0.788 - - - - - - - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
67. zgc:92380 ENSDARG00000041339 1867 0.788 - 0.788 - - - - - - - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
68. mrpl48 ENSDARG00000035167 1008 0.787 - - - - - - 0.787 - - mitochondrial ribosomal protein L48 [Source:ZFIN;Acc:ZDB-GENE-041008-125]
69. smpd2 smpd2 1792 0.787 - 0.787 - - - - - - -
70. MATR3 MATR3 3962 0.785 - 0.785 - - - - - - -
71. aup1 ENSDARG00000092609 2431 0.782 - 0.782 - - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
72. pias1b ENSDARG00000062445 538 0.782 - - - - - 0.782 - - - protein inhibitor of activated STAT, 1b [Source:ZFIN;Acc:ZDB-GENE-050419-202]
73. zgc:112265 ENSDARG00000100406 339 0.781 - 0.781 - - - - - - - zgc:112265 [Source:ZFIN;Acc:ZDB-GENE-050626-133]
74. ing5a ENSDARG00000022413 268 0.78 - - - - - 0.780 - - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
75. ATF6B 960 0.78 - - - - - 0.780 - - - activating transcription factor 6 beta
76. arhgap35 254 0.778 - - - - - - 0.778 - - Rho GTPase activating protein 35b, transcript variant X2
77. gcc1 ENSDARG00000045541 1821 0.778 - - - - - 0.778 - - - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
78. mrps25 ENSDARG00000041306 3654 0.777 - - - - - - 0.777 - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
79. cobl_1 ENSDARG00000091006 293 0.776 - - - - - - 0.776 - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
80. hddc3 ENSDARG00000020473 2814 0.776 - 0.776 - - - - - - - HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
81. nenf ENSDARG00000040192 599 0.775 - - - - - 0.775 - - - neudesin neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-050320-129]
82. abhd16a ENSDARG00000078929 1115 0.775 - 0.775 - - - - - - - abhydrolase domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-010601-2]
83. tmem108 ENSDARG00000090230 1924 0.775 - 0.775 - - - - - - - transmembrane protein 108 [Source:ZFIN;Acc:ZDB-GENE-091204-397]
84. INCENP 1189 0.774 0.774 - - - - - - - - inner centromere protein
85. bin2b ENSDARG00000010255 2649 0.774 - 0.774 - - - - - - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
86. rbl1 ENSDARG00000008141 1217 0.773 - - - - - - 0.773 - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
87. si:ch73-196k8.2 si:ch73-196k8.2 427 0.773 - - - - - - 0.773 - -
88. cdc42ep4a ENSDARG00000101457, ENSDARG00000114480 1226 0.773 - 0.773 - - - - - - - CDC42 effector protein (Rho GTPase binding) 4a [Source:ZFIN;Acc:ZDB-GENE-040704-22]
89. pnkp ENSDARG00000100455, ENSDARG00000114060 1475 0.772 - 0.772 - - - - - - - polynucleotide kinase 3'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-061013-433]
90. pkma ENSDARG00000099730 1314 0.772 - 0.772 - - - - - - - pyruvate kinase M1/2a [Source:ZFIN;Acc:ZDB-GENE-031201-4]
91. ezra ENSDARG00000020944 3105 0.772 - - - - - - 0.772 - - ezrin a [Source:ZFIN;Acc:ZDB-GENE-050522-18]
92. trpm7 ENSDARG00000036232 925 0.77 - - - - - - 0.770 - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
93. ppwd1 ENSDARG00000063161 752 0.77 - - - - - - 0.770 - - peptidylprolyl isomerase domain and WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-16]
94. bmp1a ENSDARG00000028071 583 0.769 - - - - - 0.769 - - - bone morphogenetic protein 1a [Source:ZFIN;Acc:ZDB-GENE-060818-1]
95. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 0.768 - 0.768 - - - - - - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
96. slmapa ENSDARG00000054458 966 0.768 - 0.768 - - - - - - - sarcolemma associated protein a [Source:ZFIN;Acc:ZDB-GENE-061013-184]
97. nr1d4b ENSDARG00000059370 243 0.768 - - - - - - 0.768 - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
98. ift80 ENSDARG00000038879 283 0.767 - - - - - - 0.767 - - intraflagellar transport 80 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041212-50]
99. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 0.767 - 0.767 - - - - - - - phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
100. fos fos 817 0.766 - 0.766 - - - - - - -

There are 300 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA