Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vdac1

Gene Name Gene ID Reads Annotation
vdac1 ENSDARG00000045132 8051 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]










Genes with expression patterns similar to vdac1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vdac1 ENSDARG00000045132 8051 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
2. wu:fb17g07 wu:fb17g07 10567 4.936 0.837 - 0.881 0.818 - 0.875 0.817 - 0.708
3. hmgb3a ENSDARG00000056725 15668 3.998 0.899 - - - 0.716 0.889 0.739 - 0.755 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
4. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 3.949 0.771 - 0.885 - - 0.837 0.714 - 0.742 meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
5. nova2 ENSDARG00000017673 7685 3.37 0.885 - 0.856 - - 0.830 - - 0.799 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
6. smarce1 ENSDARG00000016871 9628 3.302 - - 0.836 - - 0.848 0.838 0.780 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
7. tuba1c ENSDARG00000055216 8384 3.299 0.847 - 0.918 - - 0.812 - - 0.722 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
8. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 3.242 0.828 - - 0.838 - 0.845 0.731 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
9. lfng ENSDARG00000037879 11783 3.238 0.858 - 0.711 - - 0.879 - - 0.790 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
10. hnrnpub ENSDARG00000004735 16496 3.21 0.864 - - - 0.778 0.782 0.786 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
11. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 3.178 - - - 0.828 0.776 0.729 0.845 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
12. cd99l2 ENSDARG00000056722 5036 3.17 0.807 - 0.822 - - 0.798 - - 0.743 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
13. plp1a ENSDARG00000103732 3544 3.167 0.806 - 0.864 - - 0.745 - - 0.752 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
14. appb ENSDARG00000055543, ENSDARG00000109552 4461 3.15 0.745 - 0.811 - - 0.796 - - 0.798 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
15. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 3.124 0.763 - - - 0.708 - 0.855 - 0.798 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
16. npm1b ENSDARG00000037675 5448 3.122 0.711 - 0.812 - - 0.804 0.795 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
17. gdi1 ENSDARG00000056122 4106 3.093 - - 0.823 0.816 - 0.702 - - 0.752 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
18. sncb ENSDARG00000104945 8197 3.066 0.722 - - 0.826 - 0.796 - 0.722 - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
19. prmt1 ENSDARG00000010246 11311 3.065 0.819 - - 0.753 - 0.789 0.704 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
20. ank2b ENSDARG00000043313 3065 3.044 0.799 - - - - 0.782 0.712 - 0.751 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
21. tmpob ENSDARG00000022978 8121 3.036 0.751 - - - - 0.724 0.785 - 0.776 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
22. znf292b ENSDARG00000043973 3791 3.034 - 0.746 - - - 0.722 0.865 - 0.701 zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
23. abi2b ENSDARG00000014875 2259 2.978 - 0.722 - - - 0.772 0.720 - 0.764 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
24. CR548630.1 CR548630.1 3301 2.574 - 0.880 0.844 - - 0.850 - - -
25. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.544 - - - - - 0.871 0.820 - 0.853 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
26. srsf4 ENSDARG00000105293 9657 2.509 0.808 - 0.900 - - 0.801 - - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
27. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 2.508 - - 0.852 - - 0.805 - - 0.851 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
28. slbp ENSDARG00000100558 3405 2.499 - 0.929 - - 0.805 - - - 0.765 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
29. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.481 - - - - - 0.824 0.824 - 0.833 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
30. si:ch211-51e12.7 ENSDARG00000045914 9598 2.481 0.818 - 0.935 - - 0.728 - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
31. u2af2b ENSDARG00000011740 6946 2.469 - 0.780 - - - - 0.873 - 0.816 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
32. hoxa9b ENSDARG00000056819 3081 2.467 0.850 - - - - 0.853 0.764 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
33. ywhae2 ENSDARG00000017014 5105 2.467 - 0.877 0.838 - - - 0.752 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
34. fscn1a ENSDARG00000059680 3999 2.454 - - - - - 0.752 0.879 - 0.823 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
35. MKI67 ENSDARG00000091150 11038 2.453 - - 0.790 - - 0.842 - - 0.821 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
36. myt1b ENSDARG00000102879 5411 2.453 0.797 - - - - 0.823 - - 0.833 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
37. khsrp ENSDARG00000026489 15738 2.453 0.783 - - - - 0.871 - - 0.799 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
38. AGO1 ENSDARG00000092644 4521 2.452 0.859 - - - 0.784 0.809 - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
39. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.451 0.874 - - - - 0.822 - - 0.755 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
40. fam60al 2846 2.447 0.834 - - - - 0.848 0.765 - - family with sequence similarity 60, member A, like
41. ylpm1 ENSDARG00000043680 7676 2.44 - 0.768 - - - 0.849 0.823 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
42. snrpf ENSDARG00000105037 10241 2.431 0.771 - - - - 0.829 0.831 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
43. sumo3a ENSDARG00000028119 13447 2.429 - - - - - 0.840 0.755 - 0.834 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
44. tmsb ENSDARG00000054911 6411 2.426 0.760 - - - - 0.856 - - 0.810 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
45. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 2.425 0.795 - - - - 0.794 - - 0.836 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
46. dla ENSDARG00000010791 9281 2.418 0.882 - - 0.811 - - - - 0.725 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
47. lypla2 ENSDARG00000053656 8971 2.415 - - - - - 0.843 0.806 - 0.766 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
48. arid2 ENSDARG00000007413 4413 2.41 - - 0.905 - 0.760 - 0.745 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
49. ARFGAP1 ENSDARG00000101616 2952 2.404 - 0.859 - 0.831 - - 0.714 - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
50. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 2.403 - - 0.848 - - 0.713 0.842 - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
51. psmb7 ENSDARG00000037962 11542 2.402 0.733 - 0.863 - - - 0.806 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
52. h2afvb ENSDARG00000116491 35692 2.396 0.889 - - 0.707 - 0.800 - - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
53. srsf6b ENSDARG00000016783 9926 2.396 - - - - - 0.854 0.739 - 0.803 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
54. apex1 ENSDARG00000045843 6345 2.391 0.801 - - - - 0.783 0.807 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
55. CABZ01111990.1 CABZ01111990.1 4374 2.38 0.811 - - - - 0.773 - - 0.796
56. tox ENSDARG00000032317 9126 2.38 0.761 - 0.877 - - 0.742 - - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
57. msi1 ENSDARG00000010710 2634 2.377 0.768 - - - - 0.825 - - 0.784 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
58. wasf3 wasf3 3287 2.377 0.766 - - - - 0.853 0.758 - -
59. anp32a ENSDARG00000006487 28249 2.375 0.708 - - 0.869 - - - - 0.798 acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
60. rnf2 ENSDARG00000010381 3427 2.375 0.715 - 0.849 - - 0.811 - - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
61. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.37 0.764 - 0.854 - - 0.752 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
62. creb1a ENSDARG00000053586 5068 2.366 - - - 0.839 - 0.755 0.772 - - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
63. mllt10 ENSDARG00000045401 7557 2.363 - - - 0.820 - 0.760 0.783 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
64. dbn1 ENSDARG00000069113 4527 2.363 0.804 - - - - 0.768 0.791 - - drebrin 1 [Source:ZFIN;Acc:ZDB-GENE-091204-284]
65. CR936437.1 CR936437.1 6465 2.361 0.808 - - - 0.767 - - - 0.786
66. znf292a ENSDARG00000016763 2253 2.36 - - 0.879 - - 0.741 0.740 - - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
67. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.356 0.825 - - - 0.711 - 0.820 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
68. nploc4 ENSDARG00000100487 1262 2.35 0.829 - 0.806 - - - 0.715 - - NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
69. stmn1a ENSDARG00000004169 21169 2.349 0.820 - - 0.789 - - 0.740 - - stathmin 1a [Source:ZFIN;Acc:ZDB-GENE-031006-14]
70. hp1bp3 ENSDARG00000044669 23708 2.348 - - 0.790 0.745 - 0.813 - - - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
71. pl10 pl10 10795 2.343 - - 0.739 - - 0.847 0.757 - -
72. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 2.342 0.798 - - - - 0.827 0.717 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
73. uba1 ENSDARG00000037559 11579 2.341 0.702 - - - - 0.902 0.737 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
74. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 2.336 - 0.835 - - 0.745 0.756 - - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
75. dbx2 2971 2.333 0.779 - 0.844 - - 0.710 - - - developing brain homeobox 2
76. her2 ENSDARG00000038205 3219 2.326 0.854 - - - 0.751 0.721 - - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
77. h2afva ENSDARG00000068820 16427 2.323 - - 0.774 - - 0.818 0.731 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
78. gap43 ENSDARG00000099744 4114 2.321 0.733 - - - - 0.809 - 0.779 - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
79. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.321 0.794 - - - - 0.778 - - 0.749 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
80. CABZ01072954.1 CABZ01072954.1 2330 2.319 - - 0.839 - - 0.762 0.718 - -
81. seta ENSDARG00000031495 39977 2.315 0.719 - - 0.754 - 0.842 - - - SET nuclear proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-030131-2221]
82. rbbp6 ENSDARG00000037919 4813 2.311 - - - - - 0.743 0.749 - 0.819 retinoblastoma binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-040930-5]
83. elof1 ENSDARG00000099453 6176 2.309 0.853 - - - - 0.700 0.756 - - ELF1 homolog, elongation factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1385]
84. CHL1 CHL1 1553 2.306 0.806 - - - - 0.775 - - 0.725
85. uchl1 ENSDARG00000026871 1578 2.305 - 0.787 - - - 0.816 0.702 - - ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-030131-3844]
86. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.301 - - - - - 0.723 0.875 - 0.703 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
87. gnao1a ENSDARG00000016676 8184 2.298 0.784 - - - - - - 0.722 0.792 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
88. HNRNPAB HNRNPAB 22267 2.297 0.720 - - - - - 0.775 - 0.802
89. hug 4100 2.295 - - - - - 0.766 0.713 - 0.816 HuG, transcript variant X2
90. plcg1 ENSDARG00000038442 5324 2.294 - 0.737 - - - 0.781 - - 0.776 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
91. ctnnbip1 ENSDARG00000038954 2519 2.294 - - 0.824 - - 0.726 - - 0.744 catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
92. atp1a3a ENSDARG00000018259 5393 2.281 0.776 - - - - 0.778 - 0.727 - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
93. si:ch73-21g5.7 ENSDARG00000093156 9412 2.281 0.832 - - - - 0.719 - - 0.730 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
94. TNPO2 ENSDARG00000042887 2290 2.274 - 0.818 - - - - 0.708 - 0.748 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
95. dpysl3 ENSDARG00000002587 4381 2.27 0.732 - - - - 0.820 - - 0.718 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
96. lpl ENSDARG00000087697 2578 2.27 - - 0.825 - - 0.707 0.738 - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
97. ssbp4 ENSDARG00000056483 10196 2.269 0.774 - - - - 0.777 0.718 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
98. MZT1 ENSDARG00000096668 2514 2.266 0.712 - - - - 0.816 - - 0.738 mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
99. inip ENSDARG00000028523 1925 2.266 0.704 - 0.816 - - - 0.746 - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
100. drg1 ENSDARG00000039345 7545 2.262 - - - - - 0.716 0.765 - 0.781 developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]

There are 2251 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA