Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vcp

Gene Name Gene ID Reads Annotation
vcp ENSDARG00000020008, ENSDARG00000116074 2284 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]










Genes with expression patterns similar to vcp

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vcp ENSDARG00000020008, ENSDARG00000116074 2284 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
2. ss18 ENSDARG00000002970 2618 2.205 - - 0.706 - - 0.700 0.799 - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
3. tmtc4 ENSDARG00000020447 873 1.944 - 0.999 - - - - - - 0.945 transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
4. pknox1.1 ENSDARG00000018765 2149 1.91 - 0.997 - - - - - - 0.913 pbx/knotted 1 homeobox 1.1 [Source:ZFIN;Acc:ZDB-GENE-020122-5]
5. tuba8l3 ENSDARG00000070155 7525 1.897 - 0.994 0.903 - - - - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
6. ccdc80 ENSDARG00000000002 1284 1.896 - 0.998 - - - - - - 0.898 coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
7. slc6a6a ENSDARG00000012534 183 1.86 - - - - - - - 0.873 0.987 solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
8. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 1.849 - 0.996 - - - - - - 0.853 erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
9. pus7 ENSDARG00000031774 195 1.849 - - - - - - - 0.875 0.974 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
10. ncoa6 ENSDARG00000071272 759 1.837 - - - - - - - 0.858 0.979 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
11. si:dkey-114c15.7 237 1.829 - - - - - - - 0.852 0.977 si:dkey-114c15.7
12. mcrs1 ENSDARG00000020840 3232 1.814 - 0.991 - - - - - - 0.823 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
13. pak6b ENSDARG00000052405 537 1.812 - 0.999 - - - - - 0.813 - p21 protein (Cdc42/Rac)-activated kinase 6b [Source:ZFIN;Acc:ZDB-GENE-041014-121]
14. aurkb ENSDARG00000037640 4874 1.796 - 0.998 - - - - 0.798 - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
15. swi5 ENSDARG00000078492 1299 1.776 - 0.997 - - - - 0.779 - - SWI5 homologous recombination repair protein [Source:ZFIN;Acc:ZDB-GENE-091204-368]
16. RBM12B ENSDARG00000079717 541 1.756 - - - - - - - 0.790 0.966 RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
17. xrcc6bp1 662 1.755 - - - - - - - 0.802 0.953 XRCC6 binding protein 1
18. psma6a ENSDARG00000019398 2702 1.749 - - 0.975 - - - 0.774 - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
19. nadl1.2 695 1.724 - - - - - - - 0.825 0.899 neural adhesion molecule L1.2, transcript variant X1
20. CCDC106 CCDC106 1908 1.718 - - - - - - 0.745 - 0.973
21. calm1b ENSDARG00000034187 13158 1.708 - 0.955 - - - 0.753 - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
22. NPR2 ENSDARG00000104393 1875 1.704 - 0.999 - - - - 0.705 - - natriuretic peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-141030-2]
23. daxx ENSDARG00000000729 734 1.701 - - - - - - 0.752 - 0.949 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
24. si:ch211-114l13.11 si:ch211-114l13.11 4727 1.698 - 0.982 0.716 - - - - - -
25. slc25a43 ENSDARG00000102048 489 1.689 - - - - - 0.711 - - 0.978 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
26. ankzf1 ENSDARG00000041904 917 1.684 - - - 0.723 - - - - 0.961 ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
27. pcdh18b ENSDARG00000052494, ENSDARG00000116134 1099 1.68 - - - - - 0.802 - - 0.878 protocadherin 18b [Source:ZFIN;Acc:ZDB-GENE-080804-1]
28. CU861453.1 ENSDARG00000097192 271 1.68 - - - - - 0.703 - - 0.977
29. pdzrn3b ENSDARG00000073869 1566 1.676 - - 0.723 - - - - - 0.953 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
30. pex13 ENSDARG00000071037 738 1.674 - - - - - - - 0.785 0.889 peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
31. ntn1a ENSDARG00000105112, ENSDARG00000111684 2553 1.667 - - - - - 0.714 - - 0.953 netrin 1a [Source:ZFIN;Acc:ZDB-GENE-990415-169]
32. cdnf ENSDARG00000075501, ENSDARG00000111042, ENSDARG00000112793 647 1.664 - - - - - 0.768 - - 0.896 cerebral dopamine neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-070410-37]
33. prpf4ba ENSDARG00000008784 936 1.66 - - - - - 0.741 - - 0.919 pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
34. paxip1 ENSDARG00000005606 1417 1.66 - - 0.722 - - - - - 0.938 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
35. olig2 ENSDARG00000040946 1405 1.657 - - 0.714 - - - - - 0.943 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
36. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.655 - - 0.716 - - - - - 0.939 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
37. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.653 - - - 0.758 - - - - 0.895 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
38. samm50l ENSDARG00000039681 2465 1.653 - - 0.712 - - - - - 0.941 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
39. phc2b_1 ENSDARG00000013224 1316 1.651 - - 0.721 - - - - - 0.930 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
40. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.645 - - - - - - - 0.740 0.905 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
41. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.643 - - 0.915 - - 0.728 - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
42. klhdc10 ENSDARG00000007764 529 1.64 - - - 0.705 - - - - 0.935 kelch domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-776]
43. tarsl2 ENSDARG00000092774 505 1.635 - - - - - 0.771 - 0.864 - threonyl-tRNA synthetase-like 2 [Source:ZFIN;Acc:ZDB-GENE-081104-490]
44. nploc4 ENSDARG00000100487 1262 1.634 - - 0.718 - - - - - 0.916 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
45. fbxo11a ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 1129 1.633 - 0.932 - - - 0.701 - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
46. eif4e3 ENSDARG00000005078 1624 1.593 - - 0.713 - - - - - 0.880 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
47. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.589 - - - - - - 0.823 - 0.766 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
48. arid1b ENSDARG00000092503 1376 1.587 - - 0.721 - - - - - 0.866 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
49. tmem248 ENSDARG00000018825 1560 1.585 - - 0.723 - - - - - 0.862 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
50. gdi1 ENSDARG00000056122 4106 1.582 - - 0.704 - - - - - 0.878 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
51. phf6 ENSDARG00000004046, ENSDARG00000115639 925 1.579 - - - - - 0.787 - 0.792 - PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]
52. hn1a hn1a 115 1.579 - - - - - 0.708 - 0.871 -
53. pnn ENSDARG00000015851 1269 1.572 - - 0.728 - - - - 0.844 - pinin, desmosome associated protein [Source:ZFIN;Acc:ZDB-GENE-060519-3]
54. kif15 ENSDARG00000012073 1936 1.557 - - - - - - 0.723 - 0.834 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
55. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.553 - - - - - - 0.757 - 0.796 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
56. CT573103.1 ENSDARG00000097550 950 1.551 - - 0.723 - - - - 0.828 -
57. clybl ENSDARG00000029729 690 1.548 - - 0.727 - - - - 0.821 - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
58. ank2b ENSDARG00000043313 3065 1.544 - - - - - 0.765 - - 0.779 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
59. abi2b ENSDARG00000014875 2259 1.529 - - - - - - 0.724 - 0.805 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
60. CAPN5 CAPN5 357 1.525 - - - - - 0.715 - 0.810 -
61. rheb ENSDARG00000090213 1432 1.524 - - - 0.747 - - - - 0.777 Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
62. MZT1 ENSDARG00000096668 2514 1.518 - - - - - - 0.756 - 0.762 mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]
63. nat10 ENSDARG00000054259 1310 1.496 - - - 0.791 - - - 0.705 - N-acetyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1543]
64. NTAN1 ENSDARG00000105182 844 1.49 - - - 0.707 - - - 0.783 - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
65. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.489 - - - - - - - 0.739 0.750 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
66. PATZ1 ENSDARG00000076584 1116 1.46 - - 0.727 - - - 0.733 - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
67. CABZ01028296.1 CABZ01028296.1 6203 1.458 - - - - - - 0.707 - 0.751
68. fgfr1a ENSDARG00000011027 2705 1.458 - - - - - - 0.717 - 0.741 fibroblast growth factor receptor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-255]
69. CKAP2L ENSDARG00000100573 1136 1.455 - - - 0.741 - - - 0.714 - cytoskeleton associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-6690]
70. acaa2 ENSDARG00000038881 2649 1.442 - - - - - - 0.721 - 0.721 acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
71. mibp2 ENSDARG00000101844 17444 1.431 - - - - - 0.722 - - 0.709 muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
72. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.43 - - 0.726 - - 0.704 - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
73. ptpn9a ENSDARG00000077495 2295 1.428 - - 0.702 - - - - 0.726 - protein tyrosine phosphatase, non-receptor type 9, a [Source:ZFIN;Acc:ZDB-GENE-101027-1]
74. myoz2b ENSDARG00000037266 2139 1.416 - - - - - 0.705 - 0.711 - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
75. rnf220a ENSDARG00000060929 693 1.41 - - - - - 0.700 - 0.710 - ring finger protein 220a [Source:ZFIN;Acc:ZDB-GENE-060929-1006]
76. NRD1 NRD1 3486 0.999 - 0.999 - - - - - - -
77. ap1g1 ENSDARG00000102394 818 0.999 - 0.999 - - - - - - - adaptor related protein complex 1 subunit gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3187]
78. dzip1 ENSDARG00000000943, ENSDARG00000113867 911 0.999 - 0.999 - - - - - - - DAZ interacting zinc finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-040526-1]
79. TMEM106C ENSDARG00000098105 793 0.999 - 0.999 - - - - - - - transmembrane protein 106C [Source:ZFIN;Acc:ZDB-GENE-061013-562]
80. casc5 1487 0.999 - 0.999 - - - - - - - cancer susceptibility candidate 5, transcript variant X3
81. plagl2 ENSDARG00000076657 2057 0.999 - 0.999 - - - - - - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
82. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 0.999 - 0.999 - - - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
83. irf6 ENSDARG00000101986 1438 0.999 - 0.999 - - - - - - - interferon regulatory factor 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1137]
84. trmt11 ENSDARG00000040033 1348 0.999 - 0.999 - - - - - - - tRNA methyltransferase 11 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-953]
85. colgalt2 ENSDARG00000014670 1932 0.999 - 0.999 - - - - - - - collagen beta(1-O)galactosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-070222-1]
86. PWWP2A ENSDARG00000075526 2163 0.999 - 0.999 - - - - - - - PWWP domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-131120-4]
87. mgat1b ENSDARG00000036065 996 0.998 - 0.998 - - - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b [Source:ZFIN;Acc:ZDB-GENE-061103-589]
88. mcm2 ENSDARG00000102798 8148 0.998 - 0.998 - - - - - - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
89. CABZ01074130.1 ENSDARG00000105274 26501 0.998 - 0.998 - - - - - - -
90. rabggtb ENSDARG00000068587 1935 0.998 - 0.998 - - - - - - - Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]
91. slc25a33 ENSDARG00000039931 2794 0.998 - 0.998 - - - - - - - solute carrier family 25 (pyrimidine nucleotide carrier), member 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2183]
92. ddx27 ENSDARG00000091831 1471 0.998 - 0.998 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
93. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 0.998 - 0.998 - - - - - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
94. SMAD4 SMAD4 3233 0.998 - 0.998 - - - - - - -
95. serinc5 ENSDARG00000008153 2863 0.998 - 0.998 - - - - - - - serine incorporator 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2918]
96. pmm2 ENSDARG00000037654 1783 0.998 - 0.998 - - - - - - - phosphomannomutase 2 [Source:ZFIN;Acc:ZDB-GENE-030722-6]
97. CABZ01112358.1 CABZ01112358.1 667 0.998 - 0.998 - - - - - - -
98. ppp3cca ENSDARG00000014962, ENSDARG00000112030 1301 0.998 - 0.998 - - - - - - - protein phosphatase 3, catalytic subunit, gamma isozyme, a [Source:ZFIN;Acc:ZDB-GENE-030829-36]
99. DDX24 ENSDARG00000104708 861 0.998 - 0.998 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 24 [Source:ZFIN;Acc:ZDB-GENE-100716-4]
100. mphosph6 ENSDARG00000093007 340 0.998 - 0.998 - - - - - - - M-phase phosphoprotein 6 [Source:ZFIN;Acc:ZDB-GENE-040801-137]

There are 1220 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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