Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vcl

Gene Name Gene ID Reads Annotation
vcl vcl 6667










Genes with expression patterns similar to vcl

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vcl vcl 6667 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. znf106a ENSDARG00000016651 6049 5.05 0.802 0.902 - 0.753 0.830 0.992 - - 0.771 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
3. mybpc2b ENSDARG00000021265 9618 4.84 0.885 0.919 0.844 - 0.741 - - 0.736 0.715 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
4. apobec2a ENSDARG00000018881 4790 4.811 0.838 0.897 0.742 0.753 - 0.766 - - 0.815 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
5. desma ENSDARG00000058656 30292 4.336 0.873 - 0.894 0.851 0.800 - 0.918 - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
6. casq2 ENSDARG00000008982 21802 4.19 0.910 - 0.883 - 0.781 0.826 - 0.790 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
7. txlnbb ENSDARG00000076241 6396 4.131 0.919 0.932 0.717 - 0.733 - - - 0.830 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
8. smyd2b ENSDARG00000005629 8181 4.127 0.827 0.923 - - 0.823 - - 0.753 0.801 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
9. tnnt2d ENSDARG00000002988 7590 4.113 0.865 0.860 0.757 - 0.792 - - - 0.839 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
10. IGFN1 IGFN1 5030 4.088 0.769 0.885 - 0.734 - 0.993 - - 0.707
11. tpma ENSDARG00000033683 752432 4.079 0.877 - 0.914 0.769 0.815 - - 0.704 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
12. pvalb4 ENSDARG00000024433 35736 4.033 0.905 - 0.838 0.724 0.787 - - 0.779 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
13. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.97 0.866 0.901 0.724 0.720 - - - - 0.759 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
14. tmem38a ENSDARG00000024047 41883 3.947 0.890 - 0.902 0.703 0.712 - - 0.740 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
15. ttna ttna 101197 3.944 0.807 - 0.889 - 0.795 - - 0.712 0.741
16. jph2 ENSDARG00000028625 6706 3.934 0.845 - - 0.855 0.749 - - 0.725 0.760 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
17. tgm2a ENSDARG00000070157 4516 3.928 0.881 - 0.831 0.712 0.775 - - - 0.729 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
18. CR847973.1 ENSDARG00000115516 8754 3.919 0.806 0.897 0.754 0.744 - - - - 0.718
19. sgcd ENSDARG00000098573 4980 3.788 0.860 - 0.782 0.715 0.727 - - - 0.704 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
20. tmem161a ENSDARG00000012790 16094 3.525 0.959 - 0.775 - - 0.980 - - 0.811 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
21. actn3b ENSDARG00000001431 15747 3.524 0.933 0.968 0.853 - 0.770 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
22. sgcb ENSDARG00000052341 4168 3.424 - 0.940 0.726 - - 0.985 - - 0.773 sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
23. tnni1al 8272 3.407 0.861 - 0.859 - - 0.881 - - 0.806 troponin I, skeletal, slow like, transcript variant X1
24. tmod4 ENSDARG00000020890 17436 3.369 - - 0.883 0.717 - - 0.962 - 0.807 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
25. COL22A1 COL22A1 4473 3.351 0.858 0.913 0.802 - - - - 0.778 -
26. chrnd ENSDARG00000019342 2728 3.341 0.844 0.913 0.797 - - - - - 0.787 cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
27. tnnt3a ENSDARG00000030270 112506 3.341 0.874 - 0.886 - 0.782 - - - 0.799 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
28. ckmb ENSDARG00000040565 505935 3.339 0.813 - 0.908 0.751 0.867 - - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
29. pbxip1a ENSDARG00000071015 4960 3.338 0.896 0.898 0.796 - - - - - 0.748 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
30. prx ENSDARG00000017246 6183 3.334 0.857 0.906 0.816 - - - - - 0.755 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
31. srl ENSDARG00000104587 11126 3.332 0.838 0.941 0.852 0.701 - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
32. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.327 0.888 0.922 0.813 - 0.704 - - - -
33. klhl31 ENSDARG00000039066 13656 3.324 - - 0.892 0.776 0.797 - - - 0.859 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
34. sptb ENSDARG00000030490 7128 3.293 0.856 0.927 0.759 - - - - - 0.751 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
35. chrna1 ENSDARG00000009021 2931 3.287 0.856 0.900 0.767 - - - - - 0.764 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
36. PTPLA PTPLA 4044 3.285 0.905 0.854 0.751 - - - - - 0.775
37. hhatla ENSDARG00000039051 6598 3.284 0.832 0.877 0.860 - - - - - 0.715 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
38. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 3.281 0.918 0.893 0.766 - - - - - 0.704 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
39. cfl2 ENSDARG00000014106 8051 3.277 0.797 0.922 0.826 0.732 - - - - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
40. mybpc3 ENSDARG00000011615 7271 3.272 - - - - 0.739 0.989 - 0.714 0.830 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
41. AIMP1 ENSDARG00000060036 4136 3.268 0.844 0.889 0.727 0.808 - - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
42. si:ch211-32p8.1 si:ch211-32p8.1 3402 3.267 - 0.733 0.783 - - - 0.999 - 0.752
43. klhl40a ENSDARG00000039052 2537 3.266 0.855 0.909 - 0.779 - - - - 0.723 kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
44. zgc:158296 ENSDARG00000070923 3935 3.265 - 0.801 0.816 0.825 - - - - 0.823 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
45. smyd1b ENSDARG00000091253 4964 3.261 0.912 0.874 - 0.707 - - - - 0.768 SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
46. SYNPO2L SYNPO2L 6697 3.259 0.902 - 0.835 - 0.720 - - - 0.802
47. tnnc1b ENSDARG00000037539 13945 3.254 - 0.915 0.739 - - - - 0.813 0.787 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
48. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.252 0.826 - 0.911 - 0.753 - - - 0.762 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
49. mdh1b ENSDARG00000018008 3196 3.23 0.838 0.769 0.839 - - - - - 0.784 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
50. trim55a ENSDARG00000029596 2858 3.228 0.781 0.924 0.759 - - - - - 0.764 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
51. eef2l2 ENSDARG00000035256 6815 3.222 0.838 0.847 0.769 - 0.768 - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
52. eno3 ENSDARG00000039007 11355 3.214 - 0.819 0.746 - 0.732 0.917 - - - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
53. sucla2 ENSDARG00000005359 5992 3.213 0.816 0.843 0.779 - - - - - 0.775 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
54. zgc:92518 ENSDARG00000016343 3837 3.204 0.911 - 0.833 0.718 - - - - 0.742 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
55. ntmt1 ENSDARG00000022399 5779 3.202 0.824 0.934 - 0.704 - - - - 0.740 N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
56. tnni2a.4 ENSDARG00000029069 122344 3.194 0.872 - 0.841 - 0.780 - - - 0.701 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
57. ryr1b ENSDARG00000023797 5693 3.185 - 0.917 0.804 - 0.742 - - - 0.722 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
58. casq1b ENSDARG00000018105 2643 3.175 0.810 0.813 0.785 - - - - - 0.767 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
59. myoz2a ENSDARG00000012311 1373 3.172 0.875 0.839 0.725 - - - - - 0.733 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
60. tpm2 ENSDARG00000104682 36853 3.163 0.756 - - 0.765 - 0.742 0.900 - - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
61. SPEG SPEG 4017 3.148 0.818 - 0.817 0.803 0.710 - - - -
62. sgcg_1 ENSDARG00000038107 1998 3.135 0.754 - - - 0.742 - - 0.857 0.782 sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
63. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 3.125 0.862 - - 0.740 - - - 0.740 0.783 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
64. stac3 ENSDARG00000098883 1765 3.112 0.824 0.848 0.738 0.702 - - - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
65. usp28 ENSDARG00000008880 1850 3.095 0.811 0.844 - 0.721 0.719 - - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
66. pygmb ENSDARG00000013317 5454 3.092 - 0.810 0.761 - 0.741 - - - 0.780 phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
67. trim63 trim63 2437 3.089 0.811 - 0.721 0.746 0.811 - - - -
68. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.078 0.890 0.755 0.730 - - - - - 0.703 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
69. mdh2 ENSDARG00000043371 14485 3.034 0.785 - 0.765 - - - - 0.704 0.780 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
70. nid1a ENSDARG00000068710 3948 2.961 0.707 - 0.743 0.765 0.746 - - - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
71. pygma ENSDARG00000055518 15972 2.705 0.931 0.931 - - 0.843 - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
72. klhl40b ENSDARG00000019125 3633 2.628 0.891 - 0.747 - - 0.990 - - - kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
73. C13H10orf71 3489 2.623 0.904 0.940 0.779 - - - - - - chromosome 13 C10orf71 homolog
74. TMPO TMPO 3264 2.621 0.908 0.915 0.798 - - - - - -
75. NRAP ENSDARG00000009341 3565 2.618 0.925 0.907 0.786 - - - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
76. zgc:66479 ENSDARG00000008732 3347 2.614 - 0.904 - 0.725 - 0.985 - - - zgc:66479 [Source:ZFIN;Acc:ZDB-GENE-031030-10]
77. myod1 ENSDARG00000030110 6019 2.614 0.893 0.879 - - - - - - 0.842 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
78. atp2a1 ENSDARG00000020574 291561 2.612 0.888 - 0.902 - 0.822 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
79. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.592 0.878 0.904 0.810 - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
80. obsl1b ENSDARG00000077388 2511 2.584 0.905 0.889 - 0.790 - - - - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
81. myhz1.3 ENSDARG00000067997 155509 2.578 0.864 - 0.872 - 0.842 - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
82. trdn ENSDARG00000041779 4283 2.575 0.874 0.882 0.819 - - - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
83. EHBP1L1 EHBP1L1 2500 2.568 0.879 0.870 0.819 - - - - - -
84. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 2.55 0.857 - 0.867 - 0.826 - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
85. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 2.546 0.851 - 0.883 - 0.812 - - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
86. mylpfb ENSDARG00000002589 70167 2.542 - 0.868 0.874 - 0.800 - - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
87. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 2.541 0.805 0.750 - - - 0.986 - - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
88. si:ch211-226o13.2 84923 2.536 - - 0.908 - 0.859 - - - 0.769 si:ch211-226o13.2
89. jph1b ENSDARG00000038826 7416 2.525 - 0.896 0.842 0.787 - - - - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
90. xirp2a ENSDARG00000071113 7113 2.524 0.866 0.932 - - - - - - 0.726 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
91. fitm1 ENSDARG00000056464 1759 2.52 0.826 0.930 0.764 - - - - - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
92. mylz3 ENSDARG00000017441 303597 2.519 0.804 - 0.881 - 0.834 - - - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
93. ckma ENSDARG00000035327, ENSDARG00000114671 418792 2.518 0.807 - 0.865 - 0.846 - - - - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
94. BX294434.1 ENSDARG00000061272 6493 2.509 0.840 0.941 0.728 - - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
95. SYNPO2 SYNPO2 7382 2.508 - - 0.907 - - - - 0.767 0.834
96. nexn ENSDARG00000057317 10972 2.503 0.903 - 0.798 - - - - - 0.802 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
97. ITGB1BP2 ENSDARG00000030176 2472 2.495 0.844 0.879 - - - - - - 0.772 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
98. rtn2a ENSDARG00000016088 12184 2.491 0.887 - 0.820 0.784 - - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
99. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 2.491 0.870 0.909 0.712 - - - - - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
100. nmrk2 ENSDARG00000067848 10293 2.488 - 0.958 0.739 - 0.791 - - - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]

There are 1461 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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