Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vcanb

Gene Name Gene ID Reads Annotation
vcanb ENSDARG00000009401 3611 versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]










Genes with expression patterns similar to vcanb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vcanb ENSDARG00000009401 3611 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
2. col1a1a ENSDARG00000012405, ENSDARG00000116113 178153 2.993 0.751 - - 0.730 - - - 0.790 0.722 collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
3. and3 ENSDARG00000056873 22650 2.649 - - - - - 0.884 0.960 0.805 - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
4. and1 ENSDARG00000088514 37603 2.58 - - - - - 0.964 0.903 0.713 - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
5. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 2.568 - - - - - 0.924 0.915 0.729 - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
6. si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 2.222 - - - - - 0.710 0.769 - 0.743 si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]
7. col4a4 ENSDARG00000002831 803 2.131 - - - - - 0.727 0.701 - 0.703 collagen, type IV, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-101001-1]
8. itih5 ENSDARG00000045517 374 1.827 - - - - - 0.906 0.921 - - inter-alpha-trypsin inhibitor heavy chain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-041210-193]
9. capn2l ENSDARG00000034211, ENSDARG00000111153 3858 1.723 - - - - - - 0.891 0.832 - calpain 2, (m/II) large subunit, like [Source:ZFIN;Acc:ZDB-GENE-050417-341]
10. bambia ENSDARG00000055381 2922 1.688 - - - - - 0.779 0.909 - - BMP and activin membrane-bound inhibitor (Xenopus laevis) homolog a [Source:ZFIN;Acc:ZDB-GENE-010416-1]
11. hapln3 ENSDARG00000045802, ENSDARG00000116387 2242 1.681 - - - - - 0.841 0.840 - - hyaluronan and proteoglycan link protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2089]
12. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1.667 - - - - - 0.756 0.911 - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
13. ITCH ITCH 1226 1.66 - 0.882 - - - - 0.778 - -
14. si:ch211-250c4.3 si:ch211-250c4.3 677 1.643 - - - - - 0.864 0.779 - -
15. ptgs2a ENSDARG00000004539 1207 1.628 - - - - - 0.731 0.897 - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
16. cebpd ENSDARG00000087303 2195 1.623 - - - - - 0.781 0.842 - - CCAAT enhancer binding protein delta [Source:ZFIN;Acc:ZDB-GENE-020111-4]
17. cnstb ENSDARG00000042759 105 1.617 - - - - - 0.804 0.813 - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
18. vcana ENSDARG00000103515 611 1.605 - - - - - 0.723 0.882 - - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
19. si:dkey-193c22.2 ENSDARG00000076735 2791 1.597 - - - - - 0.742 0.855 - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
20. mia2 ENSDARG00000099973 139 1.597 - - - - - 0.773 0.824 - - MIA SH3 domain ER export factor 2 [Source:ZFIN;Acc:ZDB-GENE-100618-1]
21. dlx2b ENSDARG00000017174, ENSDARG00000116017 580 1.587 - - - - - 0.812 0.775 - - distal-less homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-18]
22. cldni ENSDARG00000054616, ENSDARG00000111133 16328 1.587 - - - - - - 0.771 0.816 - claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
23. zgc:165481 ENSDARG00000060092 95 1.578 - - - - - - 0.872 - 0.706 zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
24. CPAMD8 ENSDARG00000056530 3481 1.573 - - - - - 0.810 0.763 - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
25. CR388068.1 CR388068.1 481 1.565 - - - - - 0.728 0.837 - -
26. rspry1 ENSDARG00000062558 1424 1.565 - 0.797 - - - - 0.768 - - ring finger and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061026-2]
27. ecm2 ENSDARG00000071549 1527 1.565 - - - - - 0.798 - - 0.767 extracellular matrix protein 2, female organ and adipocyte specific [Source:ZFIN;Acc:ZDB-GENE-050208-651]
28. tmub1 ENSDARG00000038787 1012 1.563 - 0.762 - - - - 0.801 - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
29. he2 945 1.562 - - - - - 0.774 0.788 - - hatching enzyme 2
30. BX088524.2 ENSDARG00000103268 564 1.558 - 0.750 - - - - 0.808 - -
31. rbm5 ENSDARG00000098280 396 1.555 - 0.731 - - - - 0.824 - - RNA binding motif protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3022]
32. CENPT CENPT 330 1.555 - 0.719 - - - - 0.836 - -
33. ccrl1a ccrl1a 40 1.554 - - - - - - 0.850 - 0.704
34. KRTCAP2 ENSDARG00000070386 10103 1.551 - - - - - - 0.821 - 0.730 keratinocyte associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-060825-91]
35. hoxa13a ENSDARG00000100312 543 1.546 - - - - - - 0.803 - 0.743 homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
36. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 1.545 - 0.756 - - - - 0.789 - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
37. zgc:113442 ENSDARG00000101906 3092 1.545 - - - 0.720 - - 0.825 - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]
38. cldne ENSDARG00000043128 6960 1.543 - - - - - - 0.771 0.772 - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
39. rgs12b ENSDARG00000036774 5088 1.54 - - - - - 0.753 0.787 - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
40. lamb1a ENSDARG00000101209 5396 1.537 - - - - - 0.729 0.808 - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
41. arpc2 ENSDARG00000075989 22423 1.535 - - - - - - 0.805 0.730 - actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
42. nt5c1bb ENSDARG00000033742 1248 1.531 - - - - - 0.807 0.724 - - 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
43. dlgap1b ENSDARG00000037415 658 1.526 - 0.718 - - - - 0.808 - - discs, large (Drosophila) homolog-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-091116-98]
44. kazald2 ENSDARG00000078518 3062 1.524 - - - 0.744 - - - - 0.780 Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
45. thbs4a ENSDARG00000102777 625 1.523 - - - - - - - 0.763 0.760 thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
46. capn9 ENSDARG00000012341 12911 1.523 - - - - - - 0.743 0.780 - calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]
47. serpinh1b ENSDARG00000019949 11693 1.522 0.775 - - - - - - 0.747 - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1b [Source:ZFIN;Acc:ZDB-GENE-990415-93]
48. angptl7 ENSDARG00000027582, ENSDARG00000110344 1574 1.516 - - - - - - - 0.708 0.808 angiopoietin-like 7 [Source:ZFIN;Acc:ZDB-GENE-041010-175]
49. plecb ENSDARG00000021987 13621 1.511 0.737 0.774 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
50. lig4 ENSDARG00000060620 369 1.511 - - - - - 0.718 0.793 - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
51. NID2 NID2 5282 1.511 - - - - - 0.724 0.787 - -
52. fat1 fat1 3934 1.509 0.707 0.802 - - - - - - -
53. arl10 37 1.509 - - - - - 0.804 - - 0.705 ADP-ribosylation factor-like 10
54. MYOM3 2720 1.506 0.743 0.763 - - - - - - - myomesin 3, transcript variant X2
55. kctd12.2 ENSDARG00000053542, ENSDARG00000113200 2951 1.501 - 0.776 - - - - 0.725 - - potassium channel tetramerisation domain containing 12.2 [Source:ZFIN;Acc:ZDB-GENE-060117-4]
56. chek2 ENSDARG00000025820, ENSDARG00000115597 77 1.5 - - - - - 0.702 0.798 - - checkpoint kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8942]
57. CR954963.1 ENSDARG00000097153 1135 1.499 - 0.731 - - - - 0.768 - -
58. slc38a6 ENSDARG00000054312 112 1.493 - - - - - 0.741 0.752 - - solute carrier family 38, member 6 [Source:ZFIN;Acc:ZDB-GENE-050522-51]
59. pomgnt1 ENSDARG00000052025, ENSDARG00000111516 983 1.491 - 0.789 - - - - 0.702 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:ZFIN;Acc:ZDB-GENE-070112-991]
60. PXN PXN 395 1.487 0.717 0.770 - - - - - - -
61. MIA ENSDARG00000052437, ENSDARG00000116215 1220 1.482 - - - - - 0.746 0.736 - - MIA SH3 domain containing [Source:ZFIN;Acc:ZDB-GENE-081022-66]
62. tnfaip2b ENSDARG00000058160 622 1.478 - 0.722 - 0.756 - - - - - tumor necrosis factor, alpha-induced protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-56]
63. pes ENSDARG00000018902 3286 1.476 0.708 0.768 - - - - - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
64. psmc1a ENSDARG00000030537 2799 1.474 - 0.766 - - - - 0.708 - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
65. capn2b ENSDARG00000055592 5431 1.466 - - - - - - 0.754 0.712 - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
66. prrc1 ENSDARG00000044304 1567 1.463 - - - - - 0.719 0.744 - - proline-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-041024-9]
67. dnajc5ab ENSDARG00000004836 2923 1.458 - 0.741 - - - - 0.717 - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
68. inpp4b ENSDARG00000075201 267 1.454 - - - - - 0.705 0.749 - - inositol polyphosphate-4-phosphatase type II B [Source:ZFIN;Acc:ZDB-GENE-090312-97]
69. RBM12B_1 RBM12B_1 1192 1.449 - 0.718 - - - 0.731 - - -
70. si:ch211-243g18.2 ENSDARG00000044261 4483 1.447 - - - - - - - 0.705 0.742 si:ch211-243g18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-2830]
71. slc8a3 ENSDARG00000004931 338 1.439 0.707 0.732 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
72. wu:fb17f05 wu:fb17f05 13622 1.437 - - - - - 0.700 0.737 - -
73. ccdc120 ENSDARG00000032856, ENSDARG00000114382 808 1.431 - - - 0.717 - - - - 0.714 coiled-coil domain containing 120 [Source:ZFIN;Acc:ZDB-GENE-061027-93]
74. chrna1 ENSDARG00000009021 2931 1.427 0.726 0.701 - - - - - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
75. casp7 ENSDARG00000091836 657 0.962 - - - - - - 0.962 - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
76. lpar2b ENSDARG00000042561 1086 0.952 - - - - - - 0.952 - - lysophosphatidic acid receptor 2b [Source:ZFIN;Acc:ZDB-GENE-051120-99]
77. gstm3 gstm3 1164 0.952 - - - - - - 0.952 - -
78. scamp2l ENSDARG00000017010 491 0.94 - - - - - - 0.940 - - secretory carrier membrane protein 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-6432]
79. srpx2 ENSDARG00000034559 452 0.938 - - - - - - 0.938 - - sushi-repeat containing protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-110411-231]
80. bbs4 ENSDARG00000063522 247 0.935 - - - - - - 0.935 - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
81. fgf8a ENSDARG00000003399 580 0.933 - - - - - - 0.933 - - fibroblast growth factor 8a [Source:ZFIN;Acc:ZDB-GENE-990415-72]
82. sp9 ENSDARG00000099374 2266 0.932 - - - - - 0.932 - - - sp9 transcription factor [Source:ZFIN;Acc:ZDB-GENE-040426-2313]
83. zgc:92061 zgc:92061 21304 0.931 - - - - - - 0.931 - -
84. NANS NANS 270 0.925 - - - - - - 0.925 - -
85. rab25a ENSDARG00000058800 451 0.924 - - - - - - 0.924 - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
86. Mar-02_1 Mar-02_1 146 0.923 - - - - - - 0.923 - -
87. alkbh6 ENSDARG00000077253 117 0.922 - - - - - - 0.922 - - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
88. si:dkey-56e3.2 ENSDARG00000092551 835 0.922 - - - - - - 0.922 - - si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
89. zgc:77816 zgc:77816 800 0.922 - - - - - - 0.922 - -
90. arhgap27 ENSDARG00000104255 439 0.917 - - - - - - 0.917 - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
91. arhgef25b ENSDARG00000014465 669 0.916 - - - - - - 0.916 - - Rho guanine nucleotide exchange factor (GEF) 25b [Source:ZFIN;Acc:ZDB-GENE-080225-17]
92. ARHGEF5 2727 0.915 - - - - - - 0.915 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
93. PDGFC ENSDARG00000077588 1064 0.913 - - - - - - 0.913 - - platelet derived growth factor c [Source:ZFIN;Acc:ZDB-GENE-071217-2]
94. stk11ip ENSDARG00000070122, ENSDARG00000111986 199 0.909 - - - - - - 0.909 - - serine/threonine kinase 11 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1022]
95. CU928070.1 CU928070.1 1152 0.906 - - - - - - 0.906 - -
96. dennd2da ENSDARG00000058666 1780 0.906 - - - - - - 0.906 - - DENN/MADD domain containing 2Da [Source:ZFIN;Acc:ZDB-GENE-061013-542]
97. ost4 ENSDARG00000096118 7679 0.905 - - - - - - 0.905 - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
98. fbxo44 ENSDARG00000022623, ENSDARG00000114432 406 0.905 - - - - - - 0.905 - - F-box protein 44 [Source:ZFIN;Acc:ZDB-GENE-041212-85]
99. anxa3a ENSDARG00000009196, ENSDARG00000112919 2143 0.904 - - - - - - 0.904 - - annexin A3a [Source:ZFIN;Acc:ZDB-GENE-040912-58]
100. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 0.903 - - - - - - 0.903 - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]

There are 1456 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA