Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vbp1

Gene Name Gene ID Reads Annotation
vbp1 ENSDARG00000030241 10619 von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]










Genes with expression patterns similar to vbp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vbp1 ENSDARG00000030241 10619 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
2. smyd2b ENSDARG00000005629 8181 3.378 0.748 0.843 - - - 0.787 1.000 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
3. rps23 ENSDARG00000021838 145026 2.588 0.757 - - - - - 0.910 - 0.921 ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
4. myod1 ENSDARG00000030110 6019 2.559 0.787 0.898 - - - 0.874 - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
5. AIMP1 ENSDARG00000060036 4136 2.536 0.769 0.901 - - - 0.866 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
6. mrps15 ENSDARG00000109289 3258 2.517 0.767 0.782 - - 0.968 - - - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
7. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.482 0.826 0.888 - - - 0.768 - - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
8. smyd1b ENSDARG00000091253 4964 2.474 0.807 0.901 - - - 0.766 - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
9. chrna1 ENSDARG00000009021 2931 2.472 0.804 0.826 - - - 0.842 - - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
10. TRIM63 TRIM63 1600 2.461 0.769 0.890 - - - 0.802 - - -
11. PTPLA PTPLA 4044 2.434 0.759 0.874 - - - 0.801 - - -
12. FHOD3_1 FHOD3_1 983 2.428 0.771 0.847 - - - 0.810 - - -
13. ITGB1BP2 ENSDARG00000030176 2472 2.405 0.759 0.835 - - - 0.811 - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
14. psmc5 ENSDARG00000015315 8458 2.394 0.707 - - - 0.974 0.713 - - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
15. klhl40a ENSDARG00000039052 2537 2.391 0.751 0.830 - - - 0.810 - - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
16. zgc:110655 zgc:110655 4237 2.386 - 0.873 0.766 - - 0.747 - - -
17. lrpprc ENSDARG00000043970 3847 2.352 - 0.748 - - 0.903 0.701 - - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
18. DUSP27 ENSDARG00000099889 1197 2.34 0.740 0.833 - - - 0.767 - - - dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
19. gypc ENSDARG00000041546 1487 2.338 0.745 0.815 - - - 0.778 - - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
20. tmsb ENSDARG00000054911 6411 2.322 0.754 0.776 - - - 0.792 - - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
21. TENC1 TENC1 1729 2.304 0.701 0.835 - - - 0.768 - - -
22. stac3 ENSDARG00000098883 1765 2.298 0.763 0.749 - - - 0.786 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
23. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.296 0.749 0.714 - - - 0.833 - - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
24. cacng1 cacng1 3118 2.295 0.743 0.806 - - - 0.746 - - -
25. PTP4A3 ENSDARG00000039997 3814 2.272 0.736 0.786 - - - 0.750 - - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
26. cap2 ENSDARG00000104478 3266 2.266 0.768 0.781 - - - 0.717 - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
27. synpo2lb ENSDARG00000078696 2361 2.266 0.778 0.784 0.704 - - - - - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
28. hsd17b10 ENSDARG00000017781 1793 2.253 0.712 0.809 - - - 0.732 - - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
29. tnnt2d ENSDARG00000002988 7590 2.229 0.748 0.724 - - - 0.757 - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
30. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 2.228 0.701 0.796 - - - 0.731 - - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
31. ptrfa ptrfa 4363 2.177 0.703 0.743 - - - 0.731 - - -
32. plcg1 ENSDARG00000038442 5324 2.174 - 0.711 0.733 - - 0.730 - - - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
33. dnajc19 ENSDARG00000044420 1756 2.171 0.732 0.722 - - - 0.717 - - - DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1730]
34. mtdhb ENSDARG00000004939 1225 2.141 0.720 0.706 - - - 0.715 - - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
35. pip5k1bb ENSDARG00000006508 2812 1.963 - - - - 0.964 - - - 0.999 phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
36. CR548630.1 CR548630.1 3301 1.959 - - - - 0.960 - 0.999 - -
37. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 1.875 - - - - 0.876 - 0.999 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
38. TRAPPC10 ENSDARG00000098118 954 1.806 - - - - 0.969 0.837 - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
39. naa15a ENSDARG00000003213 5889 1.794 - - - - 0.976 0.818 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
40. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 1.793 - 0.798 - - - - 0.995 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
41. pdcd5 ENSDARG00000026072 3135 1.79 - - - - 0.957 0.833 - - - programmed cell death 5 [Source:ZFIN;Acc:ZDB-GENE-040426-980]
42. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 1.787 0.827 - - - - - 0.960 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
43. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.783 - - - - 0.833 - - - 0.950 F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
44. rtn4a ENSDARG00000044601, ENSDARG00000112237 24526 1.777 0.812 - - - - - 0.965 - - reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
45. dpp9 ENSDARG00000052606 2279 1.76 - 0.802 - - 0.958 - - - - dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
46. rpl35 ENSDARG00000018334 69583 1.747 - - - - 0.824 - 0.923 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
47. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.744 - 0.745 - - - - 0.999 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
48. mapk6 ENSDARG00000032103 6422 1.742 - - - - - 0.744 - - 0.998 mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
49. C9H2orf47 C9H2orf47 2036 1.735 - - - - 0.960 0.775 - - -
50. setd3 ENSDARG00000016513 1507 1.725 - 0.879 - - - 0.846 - - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
51. srl ENSDARG00000104587 11126 1.722 0.851 0.871 - - - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
52. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.722 - 0.763 - - 0.959 - - - - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
53. pno1 ENSDARG00000008502 4547 1.72 - 0.787 - - 0.933 - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
54. nxf1 ENSDARG00000055076 3251 1.718 - - - - 0.951 0.767 - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
55. med14 ENSDARG00000009953 1383 1.714 - - - - 0.962 0.752 - - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
56. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.712 - 0.764 - - 0.948 - - - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
57. tns1 tns1 5891 1.711 - 0.828 - - 0.883 - - - -
58. med13b ENSDARG00000003910 1143 1.711 - - - - 0.962 0.749 - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
59. txlnbb ENSDARG00000076241 6396 1.706 0.818 0.888 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
60. znf865 ENSDARG00000036698 15532 1.705 - - - - 0.894 0.811 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
61. eng1b eng1b 2544 1.705 - - - - 0.966 0.739 - - -
62. cct2 ENSDARG00000087206, ENSDARG00000104674 19049 1.704 - - - - - 0.706 - - 0.998 chaperonin containing TCP1, subunit 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-020419-6]
63. lpl ENSDARG00000087697 2578 1.698 - 0.801 - - - 0.897 - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
64. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.694 0.753 - - - 0.941 - - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
65. cd248b ENSDARG00000077938 2561 1.692 - 0.840 - - - 0.852 - - - CD248 molecule, endosialin b [Source:ZFIN;Acc:ZDB-GENE-050309-46]
66. CR847973.1 ENSDARG00000115516 8754 1.691 0.837 - - - - 0.854 - - -
67. hccs hccs 1758 1.681 - - 0.716 - 0.965 - - - -
68. cacna2d1a ENSDARG00000014804 1924 1.68 0.804 0.876 - - - - - - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
69. cox7c ENSDARG00000104537 12169 1.676 - - - - 0.894 0.782 - - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
70. aatf ENSDARG00000025467, ENSDARG00000109548 796 1.675 - - - - 0.970 0.705 - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
71. ndufa11 ENSDARG00000042777 2757 1.675 - - 0.714 - 0.961 - - - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
72. NPR2 ENSDARG00000104393 1875 1.674 - - - - 0.958 0.716 - - - natriuretic peptide receptor 2 [Source:ZFIN;Acc:ZDB-GENE-141030-2]
73. atp2a2a ENSDARG00000029439 940 1.674 - 0.710 - - 0.964 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a [Source:ZFIN;Acc:ZDB-GENE-040426-702]
74. comtb ENSDARG00000025679, ENSDARG00000111678 1692 1.672 - - - - 0.959 0.713 - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
75. ctdspl2b ENSDARG00000060586 1682 1.671 0.715 - - - 0.956 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
76. usp36 ENSDARG00000032327 1884 1.669 - 0.706 - - 0.963 - - - - ubiquitin specific peptidase 36 [Source:ZFIN;Acc:ZDB-GENE-030131-5450]
77. ATP5J_2 ATP5J_2 2381 1.665 - 0.826 - - - 0.839 - - -
78. ddx1 ENSDARG00000032117 1295 1.663 - - - - 0.960 0.703 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-215]
79. srpk3 ENSDARG00000005916 1546 1.661 0.802 0.859 - - - - - - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
80. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.649 0.816 0.833 - - - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
81. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.649 0.770 0.879 - - - - - - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
82. NAT16 ENSDARG00000086222 4682 1.649 0.838 - - - - 0.811 - - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
83. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.648 0.758 - - - - 0.890 - - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
84. ola1 ENSDARG00000044565 22424 1.647 0.827 - - - - 0.820 - - - Obg-like ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5063]
85. pfdn2 ENSDARG00000025391, ENSDARG00000110096 3176 1.645 - 0.810 - - - 0.835 - - - prefoldin subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060519-27]
86. nop56 ENSDARG00000012820 15231 1.641 0.808 0.833 - - - - - - - NOP56 ribonucleoprotein homolog [Source:ZFIN;Acc:ZDB-GENE-040109-1]
87. gps1 ENSDARG00000040650 3893 1.641 - - 0.755 - - 0.886 - - - G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
88. myl12.1 ENSDARG00000099766 50993 1.639 - - 0.813 - - - 0.826 - - myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
89. ttyh2 ENSDARG00000016934 1868 1.638 - - - - 0.873 0.765 - - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
90. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.634 0.782 - - - - 0.852 - - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
91. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.634 0.787 0.847 - - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
92. murca murca 6614 1.634 0.789 - - - - 0.845 - - -
93. pygma ENSDARG00000055518 15972 1.631 0.805 0.826 - - - - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
94. nexn ENSDARG00000057317 10972 1.63 0.781 - - - - 0.849 - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
95. tmem47 ENSDARG00000057322 4691 1.63 0.752 - - - - 0.878 - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
96. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.629 0.752 0.877 - - - - - - -
97. UNKL ENSDARG00000037838 1086 1.629 - - - - 0.926 0.703 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
98. cct5 ENSDARG00000045399 11572 1.627 0.831 0.796 - - - - - - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
99. mrps9 ENSDARG00000061505 1636 1.622 - 0.809 - - - 0.813 - - - mitochondrial ribosomal protein S9 [Source:ZFIN;Acc:ZDB-GENE-060825-257]
100. rpl7l1 ENSDARG00000042864 3256 1.622 0.755 - - - 0.867 - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]

There are 1613 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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