Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vax1

Gene Name Gene ID Reads Annotation
vax1 ENSDARG00000021916, ENSDARG00000114230 152 ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]










Genes with expression patterns similar to vax1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vax1 ENSDARG00000021916, ENSDARG00000114230 152 7 - 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
2. vax2 ENSDARG00000058702 175 3.614 - - 0.941 0.877 - - - 0.929 0.867 ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
3. zgc:171531 zgc:171531 77 3.439 - - 0.749 0.942 - - - 0.870 0.878
4. six3b ENSDARG00000054879 2416 3.036 - - 0.728 0.746 - - - 0.787 0.775 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
5. nkx2.1b nkx2.1b 125 2.618 - - 0.867 0.904 - - - - 0.847
6. nkx2.1a nkx2.1a 156 2.567 - - 0.824 0.879 - - - - 0.864
7. npvf ENSDARG00000036227 23 2.557 - - 0.828 0.895 - - - 0.834 - neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
8. six3a ENSDARG00000058008, ENSDARG00000114971 586 2.529 - - 0.823 0.745 0.961 - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
9. slc1a3b ENSDARG00000043148 431 2.5 - - 0.895 0.877 - - - - 0.728 solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
10. six6b ENSDARG00000031316 132 2.129 - - - 0.710 - - - 0.713 0.706 SIX homeobox 6b [Source:ZFIN;Acc:ZDB-GENE-050522-308]
11. rictora ENSDARG00000100867 20 2 - 1.000 - - - - 1.000 - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
12. lsm14b ENSDARG00000025386 23 2 - 1.000 - - - - 1.000 - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
13. lctlb ENSDARG00000016337 35 1.921 - - - - - - 1.000 0.921 - lactase-like b [Source:ZFIN;Acc:ZDB-GENE-060503-93]
14. ODF3L2 40 1.912 - 1.000 - - - - 0.912 - - outer dense fiber of sperm tails 3-like 2
15. im:7136021 ENSDARG00000054128 79 1.907 - 1.000 - - - - 0.907 - - im:7136021 [Source:ZFIN;Acc:ZDB-GENE-041008-74]
16. cx50.5 cx50.5 15 1.892 - 1.000 - - - - - 0.892 -
17. med8 ENSDARG00000114425 7 1.834 - - - - - - 1.000 0.834 - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
18. syne3 ENSDARG00000023237 23 1.818 - - - - - - 1.000 - 0.818 spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
19. zgc:194659 ENSDARG00000079347 17 1.785 - - 0.785 - - - 1.000 - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
20. GSC2 GSC2 3 1.772 - - - - - - 1.000 - 0.772
21. arl13a ENSDARG00000052575 25 1.753 - - - - - - 0.912 0.841 - ADP-ribosylation factor-like 13A [Source:ZFIN;Acc:ZDB-GENE-040426-1790]
22. si:dkey-21o19.2 ENSDARG00000088900 52 1.747 - - - - - - - 0.909 0.838 si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
23. SLC38A8 SLC38A8 17 1.741 - 0.802 - - - - - 0.939 -
24. st6galnac1.2 ENSDARG00000043816 51 1.737 - - 0.737 - - - 1.000 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
25. si:ch211-79g12.1 ENSDARG00000116692 2 1.737 - 1.000 0.737 - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
26. pax6l pax6l 54 1.733 - - - - - - - 0.971 0.762
27. zgc:163077 ENSDARG00000101593 60 1.727 - 1.000 - - - - 0.727 - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
28. bgna ENSDARG00000017884 9 1.72 - 1.000 - - - - 0.720 - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
29. si:ch211-161n3.3 ENSDARG00000092989 9 1.72 - 1.000 0.720 - - - - - - si:ch211-161n3.3 [Source:ZFIN;Acc:ZDB-GENE-041210-102]
30. ahr1b ENSDARG00000023537 44 1.71 - - - - - - - 0.827 0.883 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
31. AL929453.1 ENSDARG00000115950 31 1.706 - 1.000 0.706 - - - - - -
32. si:dkey-25i10.5 si:dkey-25i10.5 18 1.703 - 1.000 - 0.703 - - - - -
33. tagln ENSDARG00000045408 48 1.685 - - 0.785 0.900 - - - - - transgelin [Source:ZFIN;Acc:ZDB-GENE-070912-1]
34. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.669 - - - - - - - 0.818 0.851 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
35. fezf1 ENSDARG00000010270 379 1.651 - - 0.940 0.711 - - - - - FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
36. ndrg1b ENSDARG00000010420 116 1.648 - - - - - - - 0.800 0.848 N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
37. SERINC4 ENSDARG00000044815 45 1.641 - - - - - - - 0.858 0.783 serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
38. rars2 ENSDARG00000032277 54 1.62 - - - - - - 0.907 0.713 - arginyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-1244]
39. si:dkey-287f10.2 si:dkey-287f10.2 3 1.619 - - 0.785 - - - - 0.834 -
40. dlx1a ENSDARG00000013125 142 1.607 - - 0.858 0.749 - - - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
41. lhx8a ENSDARG00000002330 25 1.575 - - 0.755 0.820 - - - - - LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]
42. mfng ENSDARG00000042925 104 1.555 - 0.837 - - - - 0.718 - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
43. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.545 - - - - - - - 0.717 0.828 cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
44. rorb ENSDARG00000033498 544 1.538 - - - - - - - 0.722 0.816 RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
45. irx6a ENSDARG00000034420 29 1.518 - - - - - - - 0.780 0.738 iroquois homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040712-5]
46. mamdc2b ENSDARG00000073695 26 1.504 - - - - - - - 0.795 0.709 MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
47. rx1 ENSDARG00000071684 247 1.5 - - - - - - - 0.751 0.749 retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
48. cryba1b ENSDARG00000053875 3256 1.496 - - - - 0.776 - - 0.720 - crystallin, beta A1b [Source:ZFIN;Acc:ZDB-GENE-040718-326]
49. hes2.2 ENSDARG00000068168 197 1.493 - - - - - - - 0.760 0.733 hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
50. dnah5 ENSDARG00000087373 168 1.486 - 0.731 - - - - 0.755 - - dynein, axonemal, heavy chain 5 [Source:ZFIN;Acc:ZDB-GENE-110411-177]
51. ptf1a ENSDARG00000014479 349 1.482 - - - - - - - 0.758 0.724 pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
52. nkx2.2b ENSDARG00000101549 266 1.482 - - - 0.754 - - - 0.728 - NK2 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-050217-3]
53. cldn11a ENSDARG00000020031 284 1.48 - - 0.728 0.752 - - - - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
54. si:ch211-10p21.1 si:ch211-10p21.1 6 1.48 - - 0.720 - - - - 0.760 -
55. pmelb ENSDARG00000033760 206 1.468 - - - - - - - 0.766 0.702 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
56. otpb ENSDARG00000058379 1143 1.449 - - - 0.733 - - - - 0.716 orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
57. PCBP4 ENSDARG00000024276 3194 1.437 - - - - 0.733 - - - 0.704 poly(rC) binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2122]
58. MLLT4 MLLT4 67 1.422 - - - - - - - 0.713 0.709
59. CU694372.1 ENSDARG00000097988 105 1 - - - - - - 1.000 - -
60. cdc25d ENSDARG00000075599 7 1 - - - - - - 1.000 - - cell division cycle 25 homolog d [Source:ZFIN;Acc:ZDB-GENE-090313-74]
61. si:ch211-238e22.5 ENSDARG00000100229 0 1 - - - - - - 1.000 - - si:ch211-238e22.5 [Source:ZFIN;Acc:ZDB-GENE-041210-374]
62. CU302326.2 CU302326.2 54 1 - 1.000 - - - - - - -
63. CABZ01061549.1 CABZ01061549.1 17 1 - - - - - - 1.000 - -
64. si:ch211-223f7.1 si:ch211-223f7.1 38 1 - 1.000 - - - - - - -
65. SNORD83 SNORD83 43 1 - 1.000 - - - - - - -
66. si:ch211-280c20.7 si:ch211-280c20.7 1 1 - - - - - - 1.000 - -
67. CR762484.2 CR762484.2 42 1 - 1.000 - - - - - - -
68. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - 1.000 - - - - - - -
69. zp3a.1 ENSDARG00000042129 18 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
70. RBBP6_10 RBBP6_10 0 1 - - - - - - 1.000 - -
71. tdrd5 ENSDARG00000071450 25 1 - - - - - - 1.000 - - tudor domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-502]
72. tmem174 ENSDARG00000035388 2 1 - - - - - - 1.000 - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
73. si:ch73-388k15.1 si:ch73-388k15.1 0 1 - - - - - - 1.000 - -
74. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - - 1.000 - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
75. cttnbp2nl cttnbp2nl 166 1 - - - - - - 1.000 - -
76. tet1 ENSDARG00000075230, ENSDARG00000110764 8 1 - - - - - - 1.000 - - tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
77. rhobtb2b ENSDARG00000089340 4 1 - - - - - - 1.000 - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
78. ZDHHC1 ENSDARG00000077546 14 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-130925-1]
79. evi5b ENSDARG00000070839 239 1 - 1.000 - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
80. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 1 - 1.000 - - - - - - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
81. si:ch211-194e1.8 si:ch211-194e1.8 14 1 - - - - - - 1.000 - -
82. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
83. tpbgl ENSDARG00000114338 5 1 - - - - - - 1.000 - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
84. CU652893.1 ENSDARG00000104131 3 1 - - - - - - 1.000 - -
85. si:dkey-1h24.6 ENSDARG00000092653 13 1 - - - - - - 1.000 - - si:dkey-1h24.6 [Source:ZFIN;Acc:ZDB-GENE-100922-103]
86. CABZ01084564.1 ENSDARG00000045137 0 1 - - - - - - 1.000 - - histamine H3 receptor-like [Source:NCBI gene;Acc:100331077]
87. bmpr1aa ENSDARG00000019728, ENSDARG00000115025 49 1 - - - - - - 1.000 - - bone morphogenetic protein receptor, type IAa [Source:ZFIN;Acc:ZDB-GENE-000502-1]
88. ugt5e1 ENSDARG00000058048 25 1 - 1.000 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
89. nkx3.3 ENSDARG00000069327, ENSDARG00000110589 66 1 - - - - - - 1.000 - - NK3 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-050306-27]
90. asic2 ENSDARG00000006849 18 1 - 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
91. mettl8 ENSDARG00000017359 36 1 - - - - - - 1.000 - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
92. aftphb ENSDARG00000071347 161 1 - 1.000 - - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
93. si:dkey-272j9.1 si:dkey-272j9.1 10 1 - - - - - - 1.000 - -
94. si:ch73-44m9.1 ENSDARG00000077115 3 1 - 1.000 - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
95. BX664625.1 ENSDARG00000043131 8 1 - - - - - - 1.000 - - natural killer cell receptor 2B4-like [Source:NCBI gene;Acc:100007935]
96. CR936442.1 ENSDARG00000105592 2 1 - - - - - - 1.000 - -
97. megf8 ENSDARG00000079751, ENSDARG00000103934 1 1 - 1.000 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
98. ppfia2 ENSDARG00000013000 45 1 - - - - - - 1.000 - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905]
99. si:dkey-9p20.24 si:dkey-9p20.24 4 1 - - - - - - 1.000 - -
100. agxta ENSDARG00000052099 65 1 - - - - - - 1.000 - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]

There are 1381 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA