Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vat1

Gene Name Gene ID Reads Annotation
vat1 ENSDARG00000056481, ENSDARG00000111382 7389 vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]










Genes with expression patterns similar to vat1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
2. actr1 ENSDARG00000011611 3879 3.287 - 0.759 - - 0.948 - 0.737 - 0.843 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
3. snrpc ENSDARG00000009871 9567 2.745 - - 0.999 - - 0.985 0.761 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
4. ck2a1 ck2a1 3749 2.669 0.984 0.712 - - 0.973 - - - -
5. mapk3 ENSDARG00000070573 6842 2.585 0.885 0.772 - - - 0.928 - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
6. hn1b hn1b 7325 2.565 - 0.806 0.987 - - - 0.772 - -
7. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.503 - 0.741 - - 0.952 - 0.810 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
8. ipo7 ENSDARG00000035751 7095 2.458 0.936 0.749 - - - - 0.773 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
9. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 2.453 0.961 0.743 - - - - 0.749 - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
10. thoc7 ENSDARG00000015394 3824 2.419 - 0.706 - - 0.980 - 0.733 - - THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
11. SERBP1 SERBP1 9276 2.398 - - - - 0.776 - 0.797 - 0.825
12. snrpf ENSDARG00000105037 10241 2.282 - 0.716 - - - - 0.844 - 0.722 small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
13. brd7 ENSDARG00000008380 3654 2.282 - 0.730 - - - - 0.833 - 0.719 bromodomain containing 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2687]
14. chtopa ENSDARG00000057234 3287 2.28 - 0.716 - - - - 0.755 - 0.809 chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
15. dag1 ENSDARG00000016153 10886 2.239 - 0.731 - - 0.764 0.744 - - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
16. pygo2 ENSDARG00000036772 2510 2.163 - 0.736 - - - - 0.710 0.717 - pygopus homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050809-108]
17. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.987 - - 0.998 0.989 - - - - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
18. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.98 - - 0.999 - 0.981 - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
19. fam192a ENSDARG00000041631 4113 1.97 0.971 - 0.999 - - - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
20. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 1.967 - - - 0.991 - 0.976 - - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
21. spata13 ENSDARG00000062837 5330 1.96 0.963 - 0.997 - - - - - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
22. rgs12b ENSDARG00000036774 5088 1.955 0.956 - 0.999 - - - - - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
23. AP3B1 2363 1.936 0.961 - - - 0.975 - - - - adaptor related protein complex 3 beta 1 subunit
24. mboat2a ENSDARG00000031845 1255 1.934 0.968 - - - - 0.966 - - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
25. ctsf ENSDARG00000063095 4564 1.929 0.970 - - - - 0.959 - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
26. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.929 - - 0.965 - - 0.964 - - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
27. spry4 ENSDARG00000068732 2091 1.927 0.966 - - - 0.961 - - - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
28. fam32al fam32al 5716 1.925 - - - - 0.966 0.959 - - -
29. si:dkey-42i9.4 ENSDARG00000008049 4752 1.924 0.974 - - - 0.950 - - - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
30. cdc42 ENSDARG00000044573 11795 1.908 - - - - 0.972 0.936 - - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
31. tceb1b 14935 1.895 - - 0.998 - 0.897 - - - - transcription elongation factor B (SIII), polypeptide 1b
32. ndufb10 ENSDARG00000028889 7680 1.891 0.910 - - 0.981 - - - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:ZFIN;Acc:ZDB-GENE-040426-1691]
33. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.881 0.913 - - - 0.968 - - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
34. CWC15 ENSDARG00000013382 8969 1.872 - - 0.999 - - - - - 0.873 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
35. eif3c ENSDARG00000016443 18003 1.863 - - - 0.967 0.896 - - - - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
36. ARHGEF5 2727 1.861 - - - - 0.971 0.890 - - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
37. cenpe ENSDARG00000063385 4428 1.852 0.859 - - 0.993 - - - - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
38. wu:fc51f04 wu:fc51f04 7074 1.851 0.895 - - - - 0.956 - - -
39. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.849 0.898 - - - 0.951 - - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
40. rpl4 ENSDARG00000041182 18655 1.847 - - - 0.970 - 0.877 - - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
41. chd4b ENSDARG00000025789 14299 1.847 - 0.918 - - 0.929 - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
42. PLEKHG4 ENSDARG00000075964 2860 1.832 - - - - - 0.967 0.865 - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
43. ipo4 ENSDARG00000041493 1578 1.823 - 0.849 - - 0.974 - - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
44. nop58 ENSDARG00000104353 8497 1.818 - - - 0.990 - - 0.828 - - NOP58 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2140]
45. nmt1a ENSDARG00000052966 5918 1.813 - 0.835 - - 0.978 - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
46. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.807 - - - 0.995 - - 0.812 - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
47. PSIP1 PSIP1 5252 1.804 - - - - - 0.967 0.837 - -
48. mt-co1 ENSDARG00000063905 130950 1.796 - - 0.951 - 0.845 - - - - cytochrome c oxidase I, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-14]
49. foxp4 ENSDARG00000076120 9458 1.786 - 0.798 - 0.988 - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
50. pes ENSDARG00000018902 3286 1.782 - 0.813 - - - 0.969 - - - pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
51. pl10 pl10 10795 1.78 - 0.800 - 0.980 - - - - -
52. CASKIN2_1 CASKIN2_1 2299 1.775 - 0.813 - - - 0.962 - - -
53. map1lc3b ENSDARG00000101127 3958 1.775 0.966 - - - - - 0.809 - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
54. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.773 - - - - 0.965 - 0.808 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
55. pelo ENSDARG00000055477 1927 1.769 0.937 0.832 - - - - - - - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
56. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.765 - 0.788 0.977 - - - - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
57. ndufab1b ENSDARG00000014915 12796 1.756 - 0.785 - 0.971 - - - - - NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
58. lama4 ENSDARG00000020785 1522 1.755 - 0.777 - - 0.978 - - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
59. tceb2 10382 1.751 - - - - - 0.953 - - 0.798 transcription elongation factor B (SIII), polypeptide 2
60. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.749 - 0.779 - - 0.970 - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
61. xirp1 ENSDARG00000030722 1486 1.747 - 0.783 - - - 0.964 - - - xin actin binding repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-050221-2]
62. ssr2 ENSDARG00000005230 31940 1.744 0.776 - - 0.968 - - - - - signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
63. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.744 0.976 0.768 - - - - - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
64. eif5a2 ENSDARG00000056186 43804 1.738 0.824 - - 0.914 - - - - - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
65. plagx ENSDARG00000036855 3768 1.726 - - - - - 0.983 0.743 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
66. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.726 0.942 - - - - - - - 0.784 cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
67. C9H2orf76 C9H2orf76 559 1.725 - - - - - 0.966 0.759 - -
68. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.725 0.964 - - - - - 0.761 - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
69. ndrg3a ENSDARG00000013087 5581 1.725 - - - 0.987 - - 0.738 - - ndrg family member 3a [Source:ZFIN;Acc:ZDB-GENE-980526-124]
70. GUSB ENSDARG00000063126 2712 1.725 - 0.733 - 0.992 - - - - - glucuronidase, beta [Source:ZFIN;Acc:ZDB-GENE-070705-256]
71. ndufa11 ENSDARG00000042777 2757 1.725 - - - - - 0.960 0.765 - - NADH:ubiquinone oxidoreductase subunit A11 [Source:ZFIN;Acc:ZDB-GENE-040426-1631]
72. eif2s1a ENSDARG00000005827 5992 1.725 - 0.728 0.997 - - - - - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
73. ANKRD50 ENSDARG00000045666 1756 1.724 - - - - 0.982 - - - 0.742 ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
74. hnrpl 6412 1.724 0.940 - - - - - 0.784 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
75. ryr1b ENSDARG00000023797 5693 1.719 0.855 - - - - 0.864 - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
76. ell2 ENSDARG00000006251 2895 1.719 - 0.727 - 0.992 - - - - - elongation factor, RNA polymerase II, 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1717]
77. cplx4b ENSDARG00000059486 3192 1.718 0.932 0.786 - - - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
78. ube2v1 ENSDARG00000041875 5739 1.718 - - - - - 0.967 - - 0.751 ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
79. rbm8a ENSDARG00000016516 8789 1.715 0.899 - - - - - - - 0.816 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
80. cdk5 ENSDARG00000056683 1998 1.715 - 0.738 - - 0.977 - - - - cyclin-dependent kinase 5 [Source:ZFIN;Acc:ZDB-GENE-010131-2]
81. ppp2r2a ppp2r2a 5785 1.714 - - - - - 0.965 0.749 - -
82. hdac9b ENSDARG00000056642 1148 1.711 - 0.742 - - - 0.969 - - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
83. mrgbp ENSDARG00000028894, ENSDARG00000110790 1316 1.706 - - - - 0.975 - 0.731 - - MRG/MORF4L binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1698]
84. ahcyl2 ENSDARG00000039343 1210 1.706 0.972 0.734 - - - - - - - adenosylhomocysteinase-like 2 [Source:ZFIN;Acc:ZDB-GENE-040115-5]
85. pou6f1 ENSDARG00000011570 1501 1.705 - - - 0.994 - - 0.711 - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
86. si:ch211-166a6.5 ENSDARG00000079745 11111 1.703 0.803 - - - - 0.900 - - - si:ch211-166a6.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9913]
87. ppm1bb ENSDARG00000011496 10196 1.703 - - - 0.980 - - - - 0.723 protein phosphatase, Mg2+/Mn2+ dependent, 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-185]
88. EEF1E1 ENSDARG00000071774 3806 1.702 - 0.709 - 0.993 - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
89. slc20a1b ENSDARG00000010641 2564 1.701 - - - - 0.980 - 0.721 - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
90. cx43.4 ENSDARG00000007099 16369 1.7 - 0.784 - 0.916 - - - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
91. irf2bp2a ENSDARG00000004702 6719 1.7 - 0.769 - - 0.931 - - - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
92. hmgb2b ENSDARG00000053990 11519 1.7 - - - - - 0.960 0.740 - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
93. senp3a ENSDARG00000095538, ENSDARG00000116812 2292 1.698 - - - 0.991 - - 0.707 - - SUMO specific peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2303]
94. rbb4l ENSDARG00000015208 5542 1.697 - 0.706 - 0.991 - - - - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
95. cahz ENSDARG00000011166 5771 1.696 0.963 0.733 - - - - - - - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
96. SLC7A5 ENSDARG00000099265, ENSDARG00000115845 2319 1.695 - - - - 0.983 - 0.712 - - solute carrier family 7 (amino acid transporter light chain, L system), member 5 [Source:ZFIN;Acc:ZDB-GENE-080818-4]
97. amotl2a ENSDARG00000061923 4713 1.693 - 0.742 - - - 0.951 - - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
98. wu:fq41a10 wu:fq41a10 7009 1.691 0.908 - - - - - 0.783 - -
99. eif3d ENSDARG00000021257 1524 1.689 - - - - 0.978 - 0.711 - - eukaryotic translation initiation factor 3, subunit D [Source:ZFIN;Acc:ZDB-GENE-030131-8442]
100. col27a1a 1747 1.686 0.955 0.731 - - - - - - - collagen, type XXVII, alpha 1a

There are 1767 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA