Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vasa

Gene Name Gene ID Reads Annotation
vasa vasa 64










Genes with expression patterns similar to vasa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vasa vasa 64 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. nanos3 ENSDARG00000068255 319 2.681 - - - 0.901 - - - 0.954 0.826 nanos homolog 3 [Source:ZFIN;Acc:ZDB-GENE-011221-1]
3. tdrd7 tdrd7 31 2.395 - - - 0.912 - - 0.763 0.720 -
4. slc2a1a ENSDARG00000001437, ENSDARG00000116129 1614 1.741 - - - - - - 0.839 0.902 - solute carrier family 2 (facilitated glucose transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3158]
5. ggt1b ENSDARG00000018342 49 1.737 - - - - - - 0.876 - 0.861 gamma-glutamyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-110408-13]
6. ccdc88b ENSDARG00000076189 123 1.736 0.851 - - - - - 0.885 - - coiled-coil domain containing 88B [Source:ZFIN;Acc:ZDB-GENE-080303-31]
7. tmem63a ENSDARG00000031956 112 1.732 - - 0.860 - - - 0.872 - - transmembrane protein 63A [Source:ZFIN;Acc:ZDB-GENE-041210-107]
8. aspdh ENSDARG00000038297 39 1.725 - - - - - 0.816 0.909 - - aspartate dehydrogenase domain containing [Source:ZFIN;Acc:ZDB-GENE-040912-102]
9. nrip2 ENSDARG00000079985 505 1.684 0.766 - - - - - 0.918 - - nuclear receptor interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9425]
10. piwil2 ENSDARG00000062601 14 1.678 - - - - - - 0.862 - 0.816 piwi-like RNA-mediated gene silencing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-345]
11. btr29 ENSDARG00000099138 5 1.673 - - - - 0.845 - - - 0.828 bloodthirsty-related gene family, member 29 [Source:ZFIN;Acc:ZDB-GENE-090512-2]
12. ttc12 ENSDARG00000056896 97 1.663 - - - - - 0.859 0.804 - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
13. polr1b ENSDARG00000077469, ENSDARG00000115880 313 1.649 - - - - - 0.801 0.848 - - RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
14. ankrd1b ENSDARG00000076192 204 1.644 - - 0.877 - - 0.767 - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
15. sv2ba ENSDARG00000057427 33 1.634 - - - - - 0.826 - - 0.808 synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
16. adra2a ENSDARG00000040841, ENSDARG00000111717, ENSDARG00000114002 44 1.625 0.833 - - - - 0.792 - - - adrenoceptor alpha 2A [Source:ZFIN;Acc:ZDB-GENE-021010-1]
17. CR677591.1 CR677591.1 19 1.62 - - - - - - 0.792 - 0.828
18. ubxn10 ENSDARG00000052535 24 1.612 - - - - - 0.703 0.909 - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
19. pdzk1ip1l pdzk1ip1l 171 1.608 - - - - - - 0.856 0.752 -
20. ccdc113 ENSDARG00000006981 67 1.601 0.867 - - - - - 0.734 - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
21. slc5a9 ENSDARG00000005518 16 1.601 - - - - 0.734 - - 0.867 - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
22. CABZ01074181.1 CABZ01074181.1 396 1.594 - - - 0.745 - - 0.849 - -
23. ebpl ENSDARG00000036636 79 1.589 - - - - - 0.805 0.784 - - EBP like [Source:ZFIN;Acc:ZDB-GENE-030616-542]
24. zgc:136493 ENSDARG00000029259 132 1.578 - - - 0.756 - - - 0.822 - zgc:136493 [Source:ZFIN;Acc:ZDB-GENE-060512-216]
25. BX571714.1 ENSDARG00000114727 243 1.576 - - - - - 0.816 0.760 - - SET domain containing 1A [Source:NCBI gene;Acc:556535]
26. si:dkey-149i8.3 si:dkey-149i8.3 9 1.575 0.872 - - - - 0.703 - - -
27. SLC3A2 SLC3A2 135 1.575 0.828 - - - - - 0.747 - -
28. nmrk1 ENSDARG00000037913 18 1.572 - - 0.869 - - 0.703 - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
29. si:ch211-120g10.1 ENSDARG00000090930 275 1.569 - - - - - 0.703 0.866 - - si:ch211-120g10.1 [Source:ZFIN;Acc:ZDB-GENE-130531-56]
30. rgs13 ENSDARG00000017653 8 1.567 - - - - 0.845 - 0.722 - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
31. RCSD1 RCSD1 144 1.556 - - - - 0.814 - 0.742 - -
32. TMEM27 TMEM27 261 1.556 - - - - - - 0.849 0.707 -
33. mycbpap ENSDARG00000069194 32 1.549 - - - - - 0.721 - - 0.828 mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
34. SNORD36 SNORD36 71 1.532 - - 0.801 0.731 - - - - -
35. hk2 ENSDARG00000101482, ENSDARG00000116757 92 1.527 - - - - - 0.826 0.701 - - hexokinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2017]
36. elavl2 ENSDARG00000040732 44 1.521 - - - - - - 0.742 0.779 - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
37. si:ch211-207j7.2 ENSDARG00000090793 316 1.52 - - - - - 0.712 0.808 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
38. BX324003.2 ENSDARG00000109802 178 1.503 0.744 - - - - 0.759 - - -
39. polr2b ENSDARG00000098783 90 1.483 - - 0.780 - - 0.703 - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
40. abcg1 ENSDARG00000063475 97 1.472 - - - 0.710 - - 0.762 - - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
41. AL954146.5 AL954146.5 202 1.466 - - - - - 0.719 0.747 - -
42. chd 56 1.459 - - - - - 0.705 0.754 - - chordin
43. ppp6r2b ENSDARG00000069654 323 1.452 0.715 - 0.737 - - - - - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
44. si:dkey-105h11.2 13 1.445 - - - - - 0.703 0.742 - - si:dkey-105h11.2
45. clcnk ENSDARG00000022560 355 1.419 - - - - - 0.716 0.703 - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
46. CABZ01080142.1 CABZ01080142.1 52 0.988 - - - - - 0.988 - - -
47. ZDHHC12 ZDHHC12 29 0.974 - - - - - - 0.974 - -
48. kctd16b ENSDARG00000020102 83 0.974 - - - - - - 0.974 - - potassium channel tetramerization domain containing 16b [Source:ZFIN;Acc:ZDB-GENE-060117-2]
49. PAQR8 ENSDARG00000088828 26 0.973 - - - - - - 0.973 - - progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
50. stx3a ENSDARG00000001880 69 0.971 - - - - - - 0.971 - - syntaxin 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1489]
51. gsto1 ENSDARG00000022183 13 0.971 - - - - - - 0.971 - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
52. FANCA ENSDARG00000098241 39 0.971 - - - - - - 0.971 - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
53. CU469544.1 CU469544.1 219 0.971 - - - - - - 0.971 - -
54. crygn1 ENSDARG00000102129 23 0.97 - - - - 0.970 - - - - crystallin, gamma N1 [Source:ZFIN;Acc:ZDB-GENE-050225-1]
55. acmsd ENSDARG00000062549 201 0.969 - - - - - - 0.969 - - aminocarboxymuconate semialdehyde decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-103]
56. CR450842.1 CR450842.1 129 0.965 0.965 - - - - - - - -
57. fhl2b ENSDARG00000003991 32 0.962 - - - - - - 0.962 - - four and a half LIM domains 2b [Source:ZFIN;Acc:ZDB-GENE-041010-121]
58. nipsnap1 ENSDARG00000005320 330 0.954 - - - - - 0.954 - - - nipsnap homolog 1 (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-991008-17]
59. METTL9 ENSDARG00000060001 262 0.952 - - - - - 0.952 - - - methyltransferase like 9 [Source:ZFIN;Acc:ZDB-GENE-061013-752]
60. PGBD4_4 PGBD4_4 15 0.945 - - - - 0.945 - - - -
61. adamts8a ENSDARG00000007709 75 0.941 - - - - 0.941 - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 8a [Source:ZFIN;Acc:ZDB-GENE-060526-202]
62. si:dkey-63d15.12 ENSDARG00000075480 9 0.941 - - - - 0.941 - - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
63. atp1a1a.5 ENSDARG00000040252 90 0.939 - - - - - - 0.939 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-020501-1]
64. si:dkey-267k7.4 si:dkey-267k7.4 111 0.938 0.938 - - - - - - - -
65. si:ch211-69l10.2 169 0.934 - - - - - - 0.934 - - si:ch211-69l10.2
66. glis3 ENSDARG00000069726 59 0.933 - - - - - 0.933 - - - GLIS family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2232]
67. aqp8b ENSDARG00000089749 108 0.932 - - - - - - 0.932 - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
68. marco ENSDARG00000059294 17 0.932 - - - - - - 0.932 - - macrophage receptor with collagenous structure [Source:ZFIN;Acc:ZDB-GENE-120514-2]
69. si:dkey-101k6.5 ENSDARG00000055136 253 0.932 - - - - - - 0.932 - - si:dkey-101k6.5 [Source:ZFIN;Acc:ZDB-GENE-081105-143]
70. slc12a10.3 ENSDARG00000055253 127 0.931 - - - - - - 0.931 - - slc12a10.3 solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-060503-518]
71. KAZN KAZN 58 0.93 0.930 - - - - - - - -
72. TRIM35_11 TRIM35_11 23 0.928 - - - - 0.928 - - - -
73. fank1 ENSDARG00000039657 9 0.927 - - - - - - 0.927 - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
74. irf7 ENSDARG00000045661 76 0.92 - - - - - - 0.920 - - interferon regulatory factor 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1518]
75. dnd dnd 33 0.919 - - - 0.919 - - - - -
76. limk1b ENSDARG00000003022 172 0.918 0.918 - - - - - - - - LIM domain kinase 1b [Source:ZFIN;Acc:ZDB-GENE-110411-106]
77. shisa3 ENSDARG00000075467 485 0.917 0.917 - - - - - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
78. pcgf6 ENSDARG00000069681 2382 0.917 - - - - - - 0.917 - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
79. CABZ01111953.1 ENSDARG00000099747 38 0.915 0.915 - - - - - - - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
80. si:ch211-101n13.1 si:ch211-101n13.1 68 0.913 - - - - - 0.913 - - -
81. tmprss4b ENSDARG00000012860 6 0.912 - - - 0.912 - - - - - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
82. si:dkey-156m18.1 si:dkey-156m18.1 13 0.912 - - - 0.912 - - - - -
83. U1_15 U1_15 1 0.912 - - - 0.912 - - - - -
84. si:ch211-276k2.3 si:ch211-276k2.3 1 0.912 - - - 0.912 - - - - -
85. U6_17 U6_17 1 0.912 - - - 0.912 - - - - -
86. TRIM14_4 TRIM14_4 2 0.912 - - - 0.912 - - - - -
87. CU041380.2 CU041380.2 1 0.912 - - - 0.912 - - - - -
88. BX004980.1 ENSDARG00000099680 10 0.912 - - - 0.912 - - - - -
89. si:dkey-31f5.8 ENSDARG00000094428 2 0.912 - - - 0.912 - - - - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
90. mboat4 ENSDARG00000052110 1 0.912 - - - 0.912 - - - - - membrane bound O-acyltransferase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090421-3]
91. ldb2a ENSDARG00000019579 26 0.912 - - - 0.912 - - - - - LIM domain binding 2a [Source:ZFIN;Acc:ZDB-GENE-990415-136]
92. wu:fe11b02_1 wu:fe11b02_1 7 0.912 - - - 0.912 - - - - -
93. casp8l1 2 0.912 - - - 0.912 - - - - - caspase 8, apoptosis-related cysteine peptidase, like 1, transcript variant X1
94. U1_39 U1_39 1 0.912 - - - 0.912 - - - - -
95. C6H22orf23 C6H22orf23 15 0.912 - - - 0.912 - - - - -
96. si:dkey-45k15.1 ENSDARG00000061714 32 0.912 - - - 0.912 - - - - - si:dkey-45k15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-67]
97. si:ch211-162i8.2 ENSDARG00000096041 4 0.912 - - - 0.912 - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
98. CU855733.1 CU855733.1 2 0.912 - - - 0.912 - - - - -
99. BX005256.5 BX005256.5 25 0.912 - - - 0.912 - - - - -
100. ska3 ENSDARG00000069917, ENSDARG00000114978 497 0.91 - - - - - - 0.910 - - spindle and kinetochore associated complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2997]

There are 950 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA