Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vars2

Gene Name Gene ID Reads Annotation
vars2 ENSDARG00000056717 283 valyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-575]










Genes with expression patterns similar to vars2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vars2 ENSDARG00000056717 283 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 valyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-575]
2. ahsa1 ahsa1 2012 1.619 - 0.848 - - - - 0.771 - -
3. klc3 ENSDARG00000055965 116 1.563 - - - - - 0.759 0.804 - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
4. si:dkey-254e13.6 ENSDARG00000088301 191 1.491 0.727 - - - 0.764 - - - - si:dkey-254e13.6 [Source:ZFIN;Acc:ZDB-GENE-070705-420]
5. ctdspla ENSDARG00000071673 1447 0.993 - 0.993 - - - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
6. dtymk ENSDARG00000052103 239 0.99 - 0.990 - - - - - - - deoxythymidylate kinase (thymidylate kinase) [Source:ZFIN;Acc:ZDB-GENE-990603-11]
7. drd3 ENSDARG00000032131, ENSDARG00000110679 25 0.988 - 0.988 - - - - - - - dopamine receptor D3 [Source:ZFIN;Acc:ZDB-GENE-021119-1]
8. bbs4 ENSDARG00000063522 247 0.987 - 0.987 - - - - - - - Bardet-Biedl syndrome 4 [Source:ZFIN;Acc:ZDB-GENE-060126-2]
9. fbln5 ENSDARG00000039273 105 0.986 - 0.986 - - - - - - - fibulin 5 [Source:ZFIN;Acc:ZDB-GENE-041010-54]
10. si:ch211-191a16.2 ENSDARG00000095665 16 0.986 - 0.986 - - - - - - - si:ch211-191a16.2 [Source:ZFIN;Acc:ZDB-GENE-081028-45]
11. MSLNL MSLNL 41 0.986 - 0.986 - - - - - - -
12. si:dkey-261l7.2 ENSDARG00000094345 51 0.986 - 0.986 - - - - - - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
13. FOXO6_1 FOXO6_1 73 0.985 - 0.985 - - - - - - -
14. si:ch73-83c10.2 si:ch73-83c10.2 22 0.985 - 0.985 - - - - - - -
15. crfb12 ENSDARG00000052413 47 0.985 - 0.985 - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
16. fam69c ENSDARG00000105040 295 0.985 - 0.985 - - - - - - - family with sequence similarity 69, member C [Source:ZFIN;Acc:ZDB-GENE-030131-8001]
17. FP236276.2 FP236276.2 43 0.985 - 0.985 - - - - - - -
18. lmf2a ENSDARG00000078094 352 0.985 - 0.985 - - - - - - - lipase maturation factor 2a [Source:ZFIN;Acc:ZDB-GENE-080723-47]
19. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 0.984 - 0.984 - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
20. cry5 ENSDARG00000019498 90 0.984 - 0.984 - - - - - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
21. TNFRSF14_3 TNFRSF14_3 135 0.984 - 0.984 - - - - - - -
22. cnstb ENSDARG00000042759 105 0.984 - 0.984 - - - - - - - consortin, connexin sorting protein b [Source:ZFIN;Acc:ZDB-GENE-041001-189]
23. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.984 - 0.984 - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
24. gpr112b gpr112b 28 0.984 - 0.984 - - - - - - -
25. shq1 ENSDARG00000058522 123 0.984 - 0.984 - - - - - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:ZFIN;Acc:ZDB-GENE-070112-1412]
26. CU861453.1 ENSDARG00000097192 271 0.983 - 0.983 - - - - - - -
27. BX321875.3 ENSDARG00000112569 24 0.983 - 0.983 - - - - - - -
28. epb41l4a ENSDARG00000040087 1013 0.983 - 0.983 - - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
29. PHF13 ENSDARG00000102023 1102 0.983 - 0.983 - - - - - - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
30. matk ENSDARG00000074670 225 0.983 - 0.983 - - - - - - - megakaryocyte-associated tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070705-183]
31. si:ch211-11n16.2 ENSDARG00000099779 417 0.983 - 0.983 - - - - - - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
32. CR759791.1 ENSDARG00000088591 160 0.983 - 0.983 - - - - - - - beta-1,3-galactosyltransferase 2-like [Source:NCBI gene;Acc:100537407]
33. uroc1 ENSDARG00000070394 357 0.983 - 0.983 - - - - - - - urocanate hydratase 1 [Source:ZFIN;Acc:ZDB-GENE-081022-148]
34. ch25h ENSDARG00000045190 35 0.983 - 0.983 - - - - - - - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
35. esm1 ENSDARG00000104370 186 0.982 - 0.982 - - - - - - - endothelial cell-specific molecule 1 [Source:ZFIN;Acc:ZDB-GENE-060929-748]
36. azi1_1 azi1_1 1375 0.982 - 0.982 - - - - - - -
37. C18H15orf61 C18H15orf61 104 0.982 - 0.982 - - - - - - -
38. ostf1_1 ENSDARG00000091555, ENSDARG00000114550 75 0.982 - 0.982 - - - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
39. ttc9c ENSDARG00000007025 463 0.982 - 0.982 - - - - - - - tetratricopeptide repeat domain 9C [Source:ZFIN;Acc:ZDB-GENE-040426-1053]
40. C5H11orf1 C5H11orf1 78 0.982 - 0.982 - - - - - - -
41. asmtl ENSDARG00000021433, ENSDARG00000114151 550 0.982 - 0.982 - - - - - - - acetylserotonin O-methyltransferase-like [Source:ZFIN;Acc:ZDB-GENE-030131-2854]
42. med30 ENSDARG00000101115 133 0.981 - 0.981 - - - - - - - mediator complex subunit 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1676]
43. cdkn2c ENSDARG00000057610 179 0.98 - 0.980 - - - - - - - cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-081104-145]
44. LRIF1_1 LRIF1_1 228 0.98 - 0.980 - - - - - - -
45. AL929007.2 AL929007.2 117 0.98 - 0.980 - - - - - - -
46. exo1 ENSDARG00000056832, ENSDARG00000112534 186 0.979 - 0.979 - - - - - - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
47. tgm1 ENSDARG00000017799 442 0.979 - 0.979 - - - - - - - transglutaminase 1, K polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-9032]
48. si:ch211-149b19.3 ENSDARG00000076011 306 0.979 - 0.979 - - - - - - - si:ch211-149b19.3 [Source:ZFIN;Acc:ZDB-GENE-110411-37]
49. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 0.979 - 0.979 - - - - - - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
50. RAP1A RAP1A 502 0.979 - 0.979 - - - - - - -
51. CABZ01080492.1 CABZ01080492.1 495 0.978 - 0.978 - - - - - - -
52. pou4f1 ENSDARG00000005559 821 0.978 - 0.978 - - - - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
53. skiv2l ENSDARG00000062206 268 0.976 - 0.976 - - - - - - - SKI2 homolog, superkiller viralicidic activity 2-like [Source:ZFIN;Acc:ZDB-GENE-010430-5]
54. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 0.976 - 0.976 - - - - - - - tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
55. casp7 ENSDARG00000091836 657 0.976 - 0.976 - - - - - - - caspase 7, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-506]
56. rab34b ENSDARG00000010977 590 0.975 - 0.975 - - - - - - - RAB34, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-091118-61]
57. gna14 ENSDARG00000035178 618 0.975 - 0.975 - - - - - - - guanine nucleotide binding protein (G protein), alpha 14 [Source:ZFIN;Acc:ZDB-GENE-040808-7]
58. si:ch73-138e16.8 175 0.975 - 0.975 - - - - - - - si:ch73-138e16.8
59. tmem243a ENSDARG00000042214, ENSDARG00000110407 527 0.975 - 0.975 - - - - - - - transmembrane protein 243, mitochondrial a [Source:ZFIN;Acc:ZDB-GENE-050417-264]
60. fam83fb ENSDARG00000104188 79 0.975 - 0.975 - - - - - - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
61. il4r il4r 75 0.975 - 0.975 - - - - - - -
62. TRIM35_10 TRIM35_10 484 0.975 - 0.975 - - - - - - -
63. WNT7A WNT7A 320 0.974 - 0.974 - - - - - - -
64. BX569778.1 BX569778.1 36 0.974 - 0.974 - - - - - - -
65. qtrtd1 243 0.973 - 0.973 - - - - - - - queuine tRNA-ribosyltransferase domain containing 1, transcript variant X1
66. si:dkey-57k17.1 ENSDARG00000104697 442 0.973 - 0.973 - - - - - - - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
67. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 0.973 - 0.973 - - - - - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
68. LUZP1 ENSDARG00000075556 55 0.973 - 0.973 - - - - - - - leucine zipper protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-90]
69. KCTD14 ENSDARG00000110240 122 0.972 - 0.972 - - - - - - - potassium channel tetramerization domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-239]
70. zdhhc6 ENSDARG00000075721 1494 0.972 - 0.972 - - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
71. ARHGAP32_1 ARHGAP32_1 124 0.972 - 0.972 - - - - - - -
72. crcp ENSDARG00000069373 730 0.972 - 0.972 - - - - - - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
73. zgc:174275 ENSDARG00000099845 172 0.971 - 0.971 - - - - - - - zgc:174275 [Source:ZFIN;Acc:ZDB-GENE-080305-5]
74. sumf1 ENSDARG00000044203, ENSDARG00000114368 245 0.971 - 0.971 - - - - - - - sulfatase modifying factor 1 [Source:ZFIN;Acc:ZDB-GENE-060421-3113]
75. C20H6orf58_1 C20H6orf58_1 216 0.971 - 0.971 - - - - - - -
76. olfml3b ENSDARG00000062171 264 0.97 - 0.970 - - - - - - - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
77. zgc:136892 ENSDARG00000069505 365 0.969 - 0.969 - - - - - - - zgc:136892 [Source:ZFIN;Acc:ZDB-GENE-060421-4745]
78. amn ENSDARG00000062947 36 0.969 - 0.969 - - - - - - - amnion associated transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-060810-59]
79. tdrd3 ENSDARG00000025421 633 0.969 - 0.969 - - - - - - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
80. NRBP2 NRBP2 127 0.969 - 0.969 - - - - - - -
81. zic5 ENSDARG00000016022 1034 0.969 - 0.969 - - - - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
82. fbxo25 ENSDARG00000075172 153 0.968 - 0.968 - - - - - - - F-box protein 25 [Source:ZFIN;Acc:ZDB-GENE-040801-19]
83. lhfp 700 0.968 - 0.968 - - - - - - - lipoma HMGIC fusion partner
84. itgb1b.2 ENSDARG00000022689 523 0.968 - 0.968 - - - - - - - integrin, beta 1b.2 [Source:ZFIN;Acc:ZDB-GENE-040426-2598]
85. CT025914.2 CT025914.2 53 0.966 - 0.966 - - - - - - -
86. sema5a ENSDARG00000058821 333 0.966 - 0.966 - - - - - - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
87. znrd1 ENSDARG00000036070 684 0.966 - 0.966 - - - - - - - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
88. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.965 - 0.965 - - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
89. pargl ENSDARG00000101719 155 0.965 - 0.965 - - - - - - - poly (ADP-ribose) glycohydrolase, like [Source:ZFIN;Acc:ZDB-GENE-090313-286]
90. pnpla7a ENSDARG00000062986 1793 0.964 - 0.964 - - - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
91. si:ch211-120e1.6 si:ch211-120e1.6 292 0.964 - 0.964 - - - - - - -
92. znf710a ENSDARG00000014680 582 0.963 - 0.963 - - - - - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
93. ldb1a ENSDARG00000010137 3035 0.962 - 0.962 - - - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
94. pcnxl4 377 0.962 - 0.962 - - - - - - - pecanex-like 4 (Drosophila), transcript variant X2
95. si:ch211-113a14.29 48 0.961 - 0.961 - - - - - - - si:ch211-113a14.29
96. si:ch211-198b3.1 si:ch211-198b3.1 765 0.959 - 0.959 - - - - - - -
97. NAIF1 ENSDARG00000062753 696 0.959 - 0.959 - - - - - - - nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
98. hdac6 ENSDARG00000008384 144 0.958 - 0.958 - - - - - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]
99. slc26a11 ENSDARG00000043021 157 0.958 - 0.958 - - - - - - - solute carrier family 26 (anion exchanger), member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5349]
100. nfyal ENSDARG00000001621 521 0.958 - 0.958 - - - - - - - nuclear transcription factor Y, alpha, like [Source:ZFIN;Acc:ZDB-GENE-040718-491]

There are 791 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA