Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vapb

Gene Name Gene ID Reads Annotation
vapb ENSDARG00000070435, ENSDARG00000112097 6469 VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]










Genes with expression patterns similar to vapb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vapb ENSDARG00000070435, ENSDARG00000112097 6469 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
2. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.767 - - - - - 0.982 0.837 - 0.948 paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
3. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.649 - - 0.793 - - 0.978 0.878 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
4. ndufab1b ENSDARG00000014915 12796 2.643 - - - - - 0.935 0.767 - 0.941 NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
5. COL22A1 COL22A1 4473 2.635 - - 0.778 - - 0.983 0.874 - -
6. pdcd4a ENSDARG00000021702 7293 2.592 - - 0.766 - - - 0.884 - 0.942 programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
7. tmod4 ENSDARG00000020890 17436 2.397 - 0.889 0.744 - - 0.764 - - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
8. eif4ebp3l ENSDARG00000041607 5257 1.943 - - - - - 0.978 - - 0.965 eukaryotic translation initiation factor 4E binding protein 3, like [Source:ZFIN;Acc:ZDB-GENE-030826-26]
9. lman2 ENSDARG00000061854 6251 1.935 - - - - - 0.977 - - 0.958 lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
10. kpnb1 ENSDARG00000104889 9282 1.904 - 0.931 - - - 0.973 - - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
11. pbxip1a ENSDARG00000071015 4960 1.888 - - - - - 0.989 0.899 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
12. phlda3 ENSDARG00000037804 1116 1.874 - 0.900 - - - 0.974 - - - pleckstrin homology-like domain, family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-030616-267]
13. ppp1r3cb ENSDARG00000014554 2507 1.867 - - - - - 0.977 0.890 - - protein phosphatase 1, regulatory subunit 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1733]
14. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.855 - - - - - 0.988 0.867 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
15. ywhah ENSDARG00000005560 11079 1.855 - - - - - 0.978 - - 0.877 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
16. ensab ENSDARG00000061644 2436 1.849 - 0.878 - - - - - - 0.971 endosulfine alpha b [Source:ZFIN;Acc:ZDB-GENE-060526-294]
17. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.847 - - - - - 0.934 0.913 - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
18. magi1b ENSDARG00000003169 2056 1.843 - 0.883 - - - - - - 0.960 membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
19. eprs ENSDARG00000060494 4729 1.838 - - - - - - 0.880 - 0.958 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
20. gnai2a ENSDARG00000018174 6549 1.834 - 0.864 - - - 0.970 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8365]
21. coq9 ENSDARG00000023583, ENSDARG00000110255, ENSDARG00000111424 6051 1.828 - - - - - 0.974 0.854 - - coenzyme Q9 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061207-37]
22. srsf11 ENSDARG00000098574 12801 1.827 - 0.864 - - - 0.963 - - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
23. NDNF ENSDARG00000062936 7287 1.824 - 0.851 - - - 0.973 - - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
24. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 1.822 - - - - - 0.988 0.834 - - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
25. ube2a ENSDARG00000098466 12765 1.821 - 0.926 - - - - 0.895 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
26. dyrk2 ENSDARG00000094646 2163 1.821 - - - - - 0.981 0.840 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2804]
27. creb3l1 ENSDARG00000015793 1988 1.82 - 0.845 - - - 0.975 - - - cAMP responsive element binding protein 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-030219-181]
28. vash2 ENSDARG00000007774 2537 1.819 - - - - - 0.984 0.835 - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
29. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 1.813 - - - - - 0.983 0.830 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
30. hn1l hn1l 8861 1.807 - 0.867 - - - - - - 0.940
31. ndufv2 ENSDARG00000013044 3758 1.803 - 0.879 - - - - 0.924 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
32. sdhb ENSDARG00000075768 5493 1.787 - - - - - 0.984 0.803 - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
33. minos1 ENSDARG00000101619 5273 1.786 - - - - - 0.979 0.807 - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
34. TMPO TMPO 3264 1.781 - - - - - - 0.861 - 0.920
35. asphd2 ENSDARG00000059629 1005 1.781 - - - - - - 0.814 - 0.967 aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
36. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.78 - - - - - - 0.819 - 0.961 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
37. tnnt2c ENSDARG00000032242 28801 1.778 - - - - - 0.985 0.793 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
38. COQ7 ENSDARG00000062594 989 1.777 - 0.860 - - - - 0.917 - - coenzyme Q7 homolog, ubiquinone (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-262]
39. PYURF ENSDARG00000045773 4576 1.773 - - - - - 0.983 0.790 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
40. naa15a ENSDARG00000003213 5889 1.768 - 0.852 - - - - 0.916 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
41. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.761 - - - - - - 0.862 - 0.899 solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
42. abi1a ENSDARG00000010155 5631 1.761 - 0.841 - - - - - - 0.920 abl-interactor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1701]
43. mef2cb ENSDARG00000009418 1124 1.758 - - - - - - 0.788 - 0.970 myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
44. hadhaa ENSDARG00000057128 2179 1.757 - 0.956 - - - - 0.801 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
45. C22H19orf70 C22H19orf70 4393 1.752 - 0.904 - - - - 0.848 - -
46. grsf1 ENSDARG00000053021 2752 1.751 - - - - - - 0.788 - 0.963 G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
47. elmo1 ENSDARG00000098753 6966 1.741 - - - - - 0.974 - - 0.767 engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
48. EEF1E1 ENSDARG00000071774 3806 1.74 - - - - - - 0.794 - 0.946 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
49. pvrl3l pvrl3l 943 1.737 - - - - - - 0.778 - 0.959
50. syne2b ENSDARG00000053484 9225 1.736 - - - - - 0.984 0.752 - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
51. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 1.736 - - - - - - 0.845 - 0.891 actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
52. sdhc ENSDARG00000038608, ENSDARG00000110542, ENSDARG00000114672 8862 1.735 - - - - - 0.975 - 0.760 - succinate dehydrogenase complex, subunit C, integral membrane protein [Source:ZFIN;Acc:ZDB-GENE-040801-26]
53. thoc2 ENSDARG00000037503 8711 1.732 - - - - - 0.971 0.761 - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
54. fermt2 ENSDARG00000020242 9351 1.73 - - - - - - 0.896 - 0.834 fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
55. ppa1b ENSDARG00000030441 9027 1.728 - 0.907 - - - - - - 0.821 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
56. PARD3B_1 PARD3B_1 1735 1.721 - 0.768 - - - - - - 0.953
57. ptp4a1 ENSDARG00000006242 10267 1.716 - - - - - 0.940 0.776 - - protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
58. farsb ENSDARG00000016864 6776 1.716 - 0.895 - - - - 0.821 - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
59. pmp22a ENSDARG00000105223, ENSDARG00000115339 9849 1.708 - 0.922 - - - - - - 0.786 peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
60. bcl2l13 ENSDARG00000062370, ENSDARG00000111116 3206 1.706 - 0.872 - - - - 0.834 - - BCL2 like 13 [Source:ZFIN;Acc:ZDB-GENE-050419-215]
61. timm8a ENSDARG00000023672, ENSDARG00000114203 1075 1.704 - - - - - 0.976 0.728 - - translocase of inner mitochondrial membrane 8 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-040801-158]
62. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.686 - - - - - 0.968 0.718 - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
63. ppp1r13ba ENSDARG00000004377 1353 1.683 - 0.839 - - - - 0.844 - - protein phosphatase 1, regulatory subunit 13Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9805]
64. LRRC14B ENSDARG00000060788 363 1.682 - - - - - - 0.714 - 0.968 leucine rich repeat containing 14B [Source:ZFIN;Acc:ZDB-GENE-060503-910]
65. ppm1e ENSDARG00000026499 770 1.681 - - - - - - 0.717 - 0.964 protein phosphatase, Mg2+/Mn2+ dependent, 1E [Source:ZFIN;Acc:ZDB-GENE-070326-2]
66. parvb ENSDARG00000019117 1042 1.666 - 0.860 - - - - 0.806 - - parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]
67. sra1 ENSDARG00000053619 2799 1.663 - - - - - - 0.711 - 0.952 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
68. crls1 ENSDARG00000038000 1088 1.655 - 0.884 - - - - 0.771 - - cardiolipin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2519]
69. hoxc8a ENSDARG00000070346 4252 1.65 - 0.895 - - - - 0.755 - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
70. tnw 16679 1.648 - - - - - 0.753 0.895 - - tenascin W, transcript variant X2
71. hspa4a ENSDARG00000004754 3439 1.645 - 0.874 - - - - 0.771 - - heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
72. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 1.643 - 0.880 - - - - 0.763 - - ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
73. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.64 - 0.903 - - - - 0.737 - - OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
74. alcama ENSDARG00000026531, ENSDARG00000116648 6938 1.638 - 0.907 - - - 0.731 - - - activated leukocyte cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-990415-30]
75. tnni1al 8272 1.637 - 0.890 0.747 - - - - - - troponin I, skeletal, slow like, transcript variant X1
76. CR847973.1 ENSDARG00000115516 8754 1.633 - - 0.768 - - - 0.865 - -
77. CR354540.2 ENSDARG00000117517 18452 1.631 - - 0.751 - - - 0.880 - -
78. mccc2 ENSDARG00000017571 5635 1.631 - - - - - - 0.788 - 0.843 methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
79. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 1.631 - - 0.773 - - - 0.858 - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
80. ryr3 ENSDARG00000071331 6795 1.628 - - 0.765 - - - 0.863 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
81. txlnba ENSDARG00000020594 9385 1.622 - - 0.740 - - - 0.882 - - taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
82. myoz1b ENSDARG00000071445 13381 1.621 - - 0.718 - - 0.903 - - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
83. psma4 ENSDARG00000045928 5112 1.619 - 0.890 - - - - 0.729 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
84. SPEG SPEG 4017 1.618 - - 0.790 - - - 0.828 - -
85. ktn1 ENSDARG00000032802 6251 1.617 - 0.847 - - - - 0.770 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
86. ca2 ENSDARG00000014488 10141 1.615 - - 0.729 - - 0.886 - - - carbonic anhydrase II [Source:ZFIN;Acc:ZDB-GENE-031219-5]
87. cct3 ENSDARG00000016173 15869 1.615 - - - - - 0.734 0.881 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
88. myom1a ENSDARG00000061249 10230 1.614 - - 0.712 - - - 0.902 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
89. EHBP1L1 EHBP1L1 2500 1.613 - - 0.735 - - - 0.878 - -
90. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 1.61 - 0.808 - - - - 0.802 - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
91. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.61 - - 0.769 - - - 0.841 - -
92. BX294434.1 ENSDARG00000061272 6493 1.607 - - 0.718 - - - 0.889 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
93. nexn ENSDARG00000057317 10972 1.6 - - 0.751 - - - 0.849 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
94. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.6 - - 0.741 - - - 0.859 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
95. ptch1 ENSDARG00000016404, ENSDARG00000095859, ENSDARG00000116142 1113 1.595 - - - - - - 0.758 - 0.837 patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]
96. msrb3 ENSDARG00000045658 988 1.595 - - 0.755 - - - 0.840 - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
97. gar1 ENSDARG00000076526, ENSDARG00000116188 3408 1.59 - 0.878 - - - - 0.712 - - GAR1 homolog, ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-040426-893]
98. hhatla ENSDARG00000039051 6598 1.59 - - 0.724 - - - 0.866 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
99. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.588 - - - - - 0.720 0.868 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
100. cfl2 ENSDARG00000014106 8051 1.586 - - 0.838 - - - 0.748 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]

There are 1480 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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