Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vangl1

Gene Name Gene ID Reads Annotation
vangl1 ENSDARG00000004305 335 VANGL planar cell polarity protein 1 [Source:ZFIN;Acc:ZDB-GENE-040621-2]










Genes with expression patterns similar to vangl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vangl1 ENSDARG00000004305 335 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 VANGL planar cell polarity protein 1 [Source:ZFIN;Acc:ZDB-GENE-040621-2]
2. si:dkey-57k17.1 ENSDARG00000104697 442 1.865 0.932 - - - - - - 0.933 - si:dkey-57k17.1 [Source:ZFIN;Acc:ZDB-GENE-110913-105]
3. trabd ENSDARG00000010445 195 1.812 0.875 - - - - - - 0.937 - TraB domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-1301]
4. slc2a8 ENSDARG00000104278 764 1.754 - - - - - - 0.824 0.930 - solute carrier family 2 (facilitated glucose transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-030829-25]
5. scaf4b ENSDARG00000018854 734 1.733 0.823 - - - - - - 0.910 - SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
6. neurla neurla 465 1.655 - - - - - 0.753 - 0.902 -
7. prkx ENSDARG00000060716 530 1.655 - - - - - - 0.790 0.865 - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
8. dctd ENSDARG00000036990 2168 1.654 - - - - - 0.768 - 0.886 - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
9. acvrl1 ENSDARG00000018179 308 1.64 0.856 - - - - - 0.784 - - activin A receptor like type 1 [Source:ZFIN;Acc:ZDB-GENE-021003-1]
10. SNAPC2 ENSDARG00000036473 158 1.632 - 0.705 - - - - - 0.927 - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
11. CABZ01114089.1 CABZ01114089.1 127 1.631 - - - - 0.702 - - 0.929 -
12. zgc:123297 ENSDARG00000056798, ENSDARG00000102158 62 1.624 0.859 - - - 0.765 - - - - zgc:123297 [Source:ZFIN;Acc:ZDB-GENE-051127-9]
13. CR352225.2 CR352225.2 1138 1.61 - 0.781 - - - - - 0.829 -
14. ap1m1 ENSDARG00000096249 227 1.592 0.862 0.730 - - - - - - - adaptor related protein complex 1 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-110126-1]
15. AL929007.2 AL929007.2 117 1.585 0.878 - - - - - 0.707 - -
16. CU041398.1 CU041398.1 17 1.569 0.869 0.700 - - - - - - -
17. ppp2r5eb ENSDARG00000069118 1902 1.566 - 0.720 - - - - - 0.846 - protein phosphatase 2, regulatory subunit B', epsilon isoform b [Source:ZFIN;Acc:ZDB-GENE-030904-6]
18. AGAP3_1 AGAP3_1 18 1.564 0.859 0.705 - - - - - - -
19. ube2j1 ENSDARG00000033489 497 1.555 0.810 - - - - - 0.745 - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
20. prkcbb ENSDARG00000022254 319 1.537 0.814 - - - - - - 0.723 - protein kinase C, beta b [Source:ZFIN;Acc:ZDB-GENE-040426-1178]
21. dnajb6b ENSDARG00000020953, ENSDARG00000110048 446 1.507 0.800 - - - - - - 0.707 - DnaJ (Hsp40) homolog, subfamily B, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-1122]
22. ppp1r13bb ENSDARG00000009142 1175 1.504 0.764 0.740 - - - - - - - protein phosphatase 1, regulatory subunit 13Bb [Source:ZFIN;Acc:ZDB-GENE-030131-4327]
23. kif16ba ENSDARG00000100225 114 1.48 0.757 0.723 - - - - - - - kinesin family member 16Ba [Source:ZFIN;Acc:ZDB-GENE-090313-233]
24. plcd4b ENSDARG00000040684 215 1.456 0.713 - - - - - 0.743 - - phospholipase C, delta 4b [Source:ZFIN;Acc:ZDB-GENE-080512-3]
25. CABZ01036080.1 CABZ01036080.1 46 0.962 - 0.962 - - - - - - -
26. phf19 ENSDARG00000078050 117 0.942 - - - - - - - 0.942 - PHD finger protein 19 [Source:ZFIN;Acc:ZDB-GENE-081105-128]
27. rbck1 ENSDARG00000031954 95 0.942 - 0.942 - - - - - - - RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]
28. TRHDE_1 TRHDE_1 102 0.939 - - - - - - - 0.939 -
29. si:dkey-11f4.16 ENSDARG00000099799 121 0.938 - - - - - - - 0.938 - si:dkey-11f4.16 [Source:ZFIN;Acc:ZDB-GENE-070912-357]
30. mlh1 ENSDARG00000025948 130 0.938 - - - - - - - 0.938 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
31. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 0.937 - - - - - - - 0.937 - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
32. phf16 phf16 1116 0.937 - - - - - - - 0.937 -
33. cacnb2a ENSDARG00000099045 374 0.936 - - - - - - - 0.936 - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
34. FP236789.2 FP236789.2 335 0.935 0.935 - - - - - - - -
35. rad23aa ENSDARG00000020001 374 0.934 - - - - - - - 0.934 - RAD23 homolog A, nucleotide excision repair protein a [Source:ZFIN;Acc:ZDB-GENE-040808-59]
36. si:busm1-105l16.2 ENSDARG00000070858, ENSDARG00000114184 199 0.933 - - - - - - - 0.933 - si:busm1-105l16.2 [Source:ZFIN;Acc:ZDB-GENE-030616-108]
37. LPHN3 LPHN3 195 0.932 - - - - - - - 0.932 -
38. elp3 ENSDARG00000042005 936 0.932 - - - - - - - 0.932 - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
39. SH2B2 ENSDARG00000090421 245 0.931 - - - - - - - 0.931 - SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]
40. gcdhl gcdhl 38 0.931 - - - - - - - 0.931 -
41. dnah9l ENSDARG00000062630 268 0.931 - - - - - - - 0.931 - dynein, axonemal, heavy polypeptide 9 like [Source:ZFIN;Acc:ZDB-GENE-050506-1]
42. fam63b 484 0.93 - - - - - - - 0.930 - family with sequence similarity 63, member B
43. zgc:66474 ENSDARG00000026453 784 0.929 - - - - - - - 0.929 - zgc:66474 [Source:ZFIN;Acc:ZDB-GENE-030131-5711]
44. si:ch211-106h4.9 ENSDARG00000075706 36 0.929 - - - - - - - 0.929 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
45. hey2 ENSDARG00000013441 540 0.929 - - - - - - - 0.929 - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
46. phactr4b ENSDARG00000032221 1389 0.929 - - - - - - - 0.929 - phosphatase and actin regulator 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1131]
47. chrna2b ENSDARG00000057025 217 0.929 - - - - - - - 0.929 - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
48. CU929119.2 CU929119.2 859 0.928 - - - - - - - 0.928 -
49. nol6 ENSDARG00000059711, ENSDARG00000115621 853 0.928 - - - - - - - 0.928 - nucleolar protein 6 (RNA-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-6294]
50. CU234171.2 CU234171.2 86 0.928 - - - - - - - 0.928 -
51. utp23 ENSDARG00000105012 1346 0.928 - - - - - - - 0.928 - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
52. slc27a1b ENSDARG00000038352, ENSDARG00000104949 298 0.928 - - - - - - - 0.928 - solute carrier family 27 (fatty acid transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-061013-672]
53. si:dkey-29n10.3 si:dkey-29n10.3 66 0.927 - - - - - - - 0.927 -
54. si:ch73-67c22.3 si:ch73-67c22.3 30 0.927 - - - - - - - 0.927 -
55. htra3a ENSDARG00000052895 28 0.927 - - - - - - - 0.927 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
56. FCHSD2 FCHSD2 35 0.927 - - - - - - - 0.927 -
57. BX682234.2 BX682234.2 28 0.927 - - - - - - - 0.927 -
58. CR936337.1 CR936337.1 38 0.927 - - - - - - - 0.927 -
59. JAKMIP3 ENSDARG00000100708 56 0.927 - - - - - - - 0.927 - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
60. sv2ba ENSDARG00000057427 33 0.927 - - - - - - - 0.927 - synaptic vesicle glycoprotein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070209-134]
61. CABZ01087562.1 CABZ01087562.1 80 0.927 - - - - - - - 0.927 -
62. CR848836.5 CR848836.5 42 0.927 - - - - - - - 0.927 -
63. MYLK4 MYLK4 180 0.926 - - - - - - - 0.926 -
64. si:ch73-30n17.4 si:ch73-30n17.4 650 0.926 - - - - - - - 0.926 -
65. si:dkey-10g2.5 si:dkey-10g2.5 72 0.926 - - - - - - - 0.926 -
66. clasp1a ENSDARG00000010280 1158 0.926 - - - - - - - 0.926 - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
67. lrrc4ba ENSDARG00000004597, ENSDARG00000112893 72 0.926 - - - - - - - 0.926 - leucine rich repeat containing 4Ba [Source:ZFIN;Acc:ZDB-GENE-080327-25]
68. si:ch211-67e16.2 41 0.926 - - - - - - - 0.926 - si:ch211-67e16.2, transcript variant X2
69. STIM2 STIM2 644 0.925 - - - - - - - 0.925 -
70. stmn4 ENSDARG00000030106 518 0.925 - - - - - - - 0.925 - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
71. mon1a ENSDARG00000078585 554 0.925 - - - - - - - 0.925 - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
72. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.924 - - - - - - - 0.924 - si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
73. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.924 - - - - - - - 0.924 - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
74. cx28.8 ENSDARG00000071042 62 0.924 - - - - - - - 0.924 - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
75. si:ch211-254c8.2 233 0.924 - - - - - - - 0.924 - si:ch211-254c8.2, transcript variant X4
76. aars2 ENSDARG00000107385 190 0.924 - - - - - - - 0.924 - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
77. trim33 ENSDARG00000016181 1718 0.924 - - - - - - - 0.924 - tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
78. nek2 ENSDARG00000005619 273 0.923 - - - - - - - 0.923 - NIMA-related kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-752]
79. clip2 ENSDARG00000059596 529 0.923 - - - - - - - 0.923 - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
80. styx ENSDARG00000057699 48 0.922 - - - - - - - 0.922 - serine/threonine/tyrosine interacting protein [Source:ZFIN;Acc:ZDB-GENE-050522-45]
81. pggt1b ENSDARG00000103464 441 0.921 - - - - - - - 0.921 - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
82. noc4l ENSDARG00000045565 1337 0.92 - - - - - - - 0.920 - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
83. zgc:174895 ENSDARG00000079416, ENSDARG00000113559 451 0.92 - - - - - - - 0.920 - zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]
84. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 0.92 - - - - - - - 0.920 - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
85. fhl1b ENSDARG00000056653 577 0.92 - - - - - - - 0.920 - four and a half LIM domains 1b [Source:ZFIN;Acc:ZDB-GENE-031219-1]
86. si:dkey-266m15.6 ENSDARG00000078508 490 0.919 - - - - - - - 0.919 - si:dkey-266m15.6 [Source:ZFIN;Acc:ZDB-GENE-070705-443]
87. mknk1 ENSDARG00000018411 749 0.919 - - - - - - - 0.919 - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
88. si:dkey-23c22.4 si:dkey-23c22.4 556 0.918 - - - - - - - 0.918 -
89. rab20 ENSDARG00000005049 346 0.917 - - - - - - - 0.917 - RAB20, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030131-9143]
90. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 0.916 0.916 - - - - - - - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
91. CACHD1 ENSDARG00000061590 1287 0.916 - - - - - - - 0.916 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
92. igdcc4 ENSDARG00000076919 1303 0.916 - - - - - - - 0.916 - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
93. usp22 ENSDARG00000040407 398 0.916 - 0.916 - - - - - - - ubiquitin specific peptidase 22 [Source:ZFIN;Acc:ZDB-GENE-060512-211]
94. fbxo7 ENSDARG00000099833 304 0.916 - - - - - - - 0.916 - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
95. ahi1 ENSDARG00000044056 951 0.915 - - - - - - - 0.915 - Abelson helper integration site 1 [Source:ZFIN;Acc:ZDB-GENE-060803-1]
96. nedd4l ENSDARG00000060006 1669 0.915 - - - - - - - 0.915 - neural precursor cell expressed, developmentally down-regulated 4-like [Source:ZFIN;Acc:ZDB-GENE-051118-2]
97. tmem223 ENSDARG00000069494 1528 0.915 - - - - - - - 0.915 - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
98. rbm27 ENSDARG00000060521 185 0.914 - - - - - - - 0.914 - RNA binding motif protein 27 [Source:ZFIN;Acc:ZDB-GENE-110411-31]
99. rint1 ENSDARG00000005547 898 0.914 - - - - - - - 0.914 - RAD50 interactor 1 [Source:ZFIN;Acc:ZDB-GENE-041210-174]
100. magixa ENSDARG00000025108 561 0.914 - - - - - - - 0.914 - MAGI family member, X-linked a [Source:ZFIN;Acc:ZDB-GENE-060503-115]

There are 882 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA