Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for vamp2

Gene Name Gene ID Reads Annotation
vamp2 ENSDARG00000056877 2158 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]










Genes with expression patterns similar to vamp2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vamp2 ENSDARG00000056877 2158 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
2. stx1b ENSDARG00000000503 2724 4.126 0.889 0.761 0.757 - - 0.842 - 0.877 - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
3. nadl1.1 1200 4.108 0.850 0.729 - - - 0.822 - 0.957 0.750 neural adhesion molecule L1.1, transcript variant X1
4. TUBB8P7 TUBB8P7 1353 3.443 0.835 0.700 - - - 0.908 1.000 - -
5. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.413 0.859 0.809 - - - 0.883 - - 0.862 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
6. slc1a2b ENSDARG00000102453 3136 3.368 0.832 0.740 - - - 0.849 - 0.947 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
7. dnajc5aa ENSDARG00000042948 2885 3.365 0.835 - - - - 0.946 - 0.811 0.773 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
8. lhx1a ENSDARG00000014018 958 3.348 0.842 - 0.707 - - 0.933 - - 0.866 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
9. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 3.348 0.832 - - - 0.786 - - 0.898 0.832 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
10. fzd3a ENSDARG00000021664 1958 3.297 0.792 - - - - 0.782 - 0.869 0.854 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
11. cadm3 ENSDARG00000057013 1545 3.276 0.721 - - - - 0.786 - 0.960 0.809 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
12. hmgb3a ENSDARG00000056725 15668 3.225 0.829 - - - - 0.739 - 0.907 0.750 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
13. inab ENSDARG00000053248 3239 3.216 0.837 0.752 - - - 0.874 - - 0.753 internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
14. Sep-03 Sep-03 1124 3.21 0.766 - - - - 0.828 - 0.799 0.817
15. nova2 ENSDARG00000017673 7685 3.181 0.896 0.719 - - - 0.862 - - 0.704 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
16. gap43 ENSDARG00000099744 4114 3.172 0.840 0.766 - - - 0.740 - - 0.826 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
17. dnaja2l ENSDARG00000010745 2367 3.138 0.717 - - - - 0.754 - 0.860 0.807 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
18. myt1b ENSDARG00000102879 5411 3.019 0.774 - 0.801 - - 0.722 - - 0.722 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
19. vamp1 ENSDARG00000031283 3094 2.788 0.897 - - - - 0.894 0.997 - - vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
20. lgi2a ENSDARG00000111069 965 2.695 - 0.748 - - - 0.948 0.999 - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
21. PRRT2 ENSDARG00000103588 913 2.595 0.715 - - - - 0.902 - 0.978 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
22. tuba1c ENSDARG00000055216 8384 2.593 0.922 - - - - 0.809 - - 0.862 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
23. ELOVL4 ELOVL4 3026 2.574 0.902 0.799 - - - - - - 0.873
24. dpysl3 ENSDARG00000002587 4381 2.572 0.868 - - - - 0.906 - - 0.798 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
25. elavl4 ENSDARG00000045639 998 2.569 - - 0.780 - - 0.937 - - 0.852 ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
26. tmem35 ENSDARG00000052567 5685 2.532 0.855 - - - - 0.802 - - 0.875 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
27. nbeaa ENSDARG00000070080 862 2.527 0.856 - - - - 0.813 - - 0.858 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
28. sox19b ENSDARG00000040266 532 2.52 0.742 - - - - 0.856 - 0.922 - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
29. scn2b ENSDARG00000101713 796 2.515 0.783 0.753 - - - 0.979 - - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
30. SPOCK1 ENSDARG00000074644 794 2.511 0.840 - - - - 0.968 - - 0.703 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
31. gng3 ENSDARG00000009553 2530 2.507 0.794 0.735 - - - 0.978 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
32. dbx2 2971 2.49 0.799 0.730 - - - 0.961 - - - developing brain homeobox 2
33. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.49 0.795 - - - - 0.839 - - 0.856 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
34. negr1 ENSDARG00000021607 1051 2.481 0.797 - - - - 0.875 - - 0.809 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
35. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.48 0.807 - 0.742 - - 0.931 - - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
36. syt11b ENSDARG00000056105 578 2.48 0.766 - - - - 0.909 - - 0.805 synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
37. atp1a3a ENSDARG00000018259 5393 2.471 0.820 0.705 - - - 0.946 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
38. rbfox3 rbfox3 1443 2.462 0.813 0.704 - - - 0.945 - - -
39. mllt11 ENSDARG00000071026 2518 2.459 0.899 - - - - 0.775 - - 0.785 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
40. stmn2b ENSDARG00000070537 1586 2.449 0.863 0.777 - - - 0.809 - - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
41. lfng ENSDARG00000037879 11783 2.44 0.861 - - - - 0.802 - - 0.777 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
42. ARHGAP22 ENSDARG00000076434 1406 2.439 - 0.856 - - - 0.873 - - 0.710 Rho GTPase activating protein 22 [Source:HGNC Symbol;Acc:HGNC:30320]
43. sox2 ENSDARG00000070913 2763 2.437 0.932 0.714 - - 0.791 - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
44. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.433 0.809 0.843 - - - 0.781 - - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
45. scn8aa ENSDARG00000005775 792 2.427 0.798 0.764 - - - 0.865 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
46. ctnnd2b ENSDARG00000003779 964 2.425 0.820 - - - - 0.862 - - 0.743 catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
47. dync1i1 ENSDARG00000060948 554 2.425 0.759 - - - - 0.919 - - 0.747 dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
48. snap25a ENSDARG00000020609 4537 2.395 0.877 0.710 - - - 0.808 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
49. PPP2R5B ENSDARG00000054931 213 2.392 0.809 - - - - 0.858 - - 0.725 protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
50. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.388 0.779 0.715 - - - 0.894 - - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
51. CHL1 CHL1 1553 2.386 0.789 0.756 - - - 0.841 - - -
52. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.386 0.861 0.714 - - - - - 0.811 - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
53. nhlh2 ENSDARG00000025495 1860 2.381 0.737 - - - - 0.928 - - 0.716 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
54. si:ch211-152f6.6 si:ch211-152f6.6 278 2.369 0.804 0.744 - - - 0.821 - - -
55. nes ENSDARG00000088805 2710 2.368 0.882 0.720 - - - 0.766 - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
56. nrarpb ENSDARG00000018958 6225 2.363 0.828 - - - - 0.733 - - 0.802 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
57. atp6v0cb ENSDARG00000036577 3472 2.351 0.821 - - - - 0.769 - - 0.761 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
58. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.346 - 0.735 - - - 0.812 - - 0.799 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
59. slc32a1 ENSDARG00000059775 1092 2.345 0.837 0.734 - - - 0.774 - - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
60. pcdh1gc5 ENSDARG00000104826 10052 2.343 0.833 0.788 - - - 0.722 - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
61. aplp1 ENSDARG00000098368 2317 2.328 0.826 - - - - - - 0.710 0.792 amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
62. CABZ01028287.1 CABZ01028287.1 626 2.324 0.772 - - - - 0.739 - - 0.813
63. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.321 - 0.881 - - - 0.702 - - 0.738
64. slc18a3a ENSDARG00000006356 1285 2.32 0.814 0.717 - - - 0.789 - - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
65. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 2.316 0.735 0.770 - - - - - - 0.811 neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
66. marcksl1b ENSDARG00000035715 37390 2.309 0.803 - - - - - - 0.755 0.751 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
67. SNAP91 ENSDARG00000098809 556 2.306 0.772 0.720 - - - 0.814 - - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
68. rrm1 ENSDARG00000014017 7296 2.3 0.845 - - - - - - 0.737 0.718 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
69. jag1a ENSDARG00000030289 1275 2.29 0.779 0.714 - - - 0.797 - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
70. scrt2 ENSDARG00000056175 4331 2.288 0.823 0.731 - - - 0.734 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
71. dlb ENSDARG00000004232 5120 2.271 0.768 0.705 - - - - - - 0.798 deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
72. hes6 ENSDARG00000019335 4754 2.262 0.776 0.773 - - - 0.713 - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
73. tfdp2 ENSDARG00000042835 1985 2.258 0.781 - - - - 0.720 - - 0.757 transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
74. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.251 0.753 - - - - 0.739 - - 0.759 neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
75. bri3bp ENSDARG00000010108 6295 2.25 - - - - - 0.720 - 0.771 0.759 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
76. adam23a ENSDARG00000062323 580 2.243 0.712 0.731 - - - 0.800 - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
77. MAP1A MAP1A 847 2.23 0.788 0.709 - - - 0.733 - - -
78. GADD45G GADD45G 382 2.22 0.741 - - - - 0.757 - - 0.722
79. rtn1b ENSDARG00000021143 1682 2.192 0.731 - - - - 0.706 - - 0.755 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
80. LANCL2 ENSDARG00000045465 1221 2.163 0.708 - - - - 0.729 - - 0.726 LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
81. prkag1 ENSDARG00000003818 2800 1.961 - - - - - - 0.998 0.963 - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2188]
82. elmo1 ENSDARG00000098753 6966 1.955 - - - - - - 0.998 0.957 - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
83. arf6b ENSDARG00000052928 4585 1.922 - - - - - - 0.997 0.925 - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
84. zbtb18 ENSDARG00000028228 3653 1.89 - - - - - - 0.999 - 0.891 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
85. fstl5 ENSDARG00000040198 213 1.867 - - - - - 0.904 - 0.963 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
86. meis1 meis1 6937 1.858 0.861 - - - - - 0.997 - -
87. slc8a2b ENSDARG00000100592 598 1.836 0.846 - - - - 0.990 - - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
88. LDLRAD4 LDLRAD4 1237 1.834 - - - - - - - 0.968 0.866
89. GATAD2B ENSDARG00000005834 3855 1.824 - - - - - - - 0.945 0.879 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
90. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.822 0.879 - - - - 0.943 - - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
91. irx3a ENSDARG00000101076 3106 1.819 0.820 - - - - - 0.999 - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
92. nefmb ENSDARG00000043697 2052 1.818 0.859 - - - - 0.959 - - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
93. kif5aa ENSDARG00000098936 2428 1.806 0.807 - - - - - 0.999 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
94. tubb5 ENSDARG00000037997 18691 1.8 0.875 - - - - - - 0.925 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
95. pcdh10b ENSDARG00000102824 732 1.792 - - - - - 0.824 - 0.968 - protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
96. snrnp27 ENSDARG00000035625 9080 1.791 - - - - - - 0.997 0.794 - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
97. epb41a ENSDARG00000099283 860 1.786 - - - - - 0.809 - 0.977 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
98. CABZ01111990.1 CABZ01111990.1 4374 1.782 0.901 - - - - 0.881 - - -
99. celf4 ENSDARG00000070045 1537 1.781 0.899 - - - - 0.882 - - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
100. AP3B2 1874 1.777 - - - - - - - 0.965 0.812 adaptor related protein complex 3 beta 2 subunit, transcript variant X2

There are 1767 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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