Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for vamp1

Gene Name Gene ID Reads Annotation
vamp1 ENSDARG00000031283 3094 vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]










Genes with expression patterns similar to vamp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. vamp1 ENSDARG00000031283 3094 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vesicle-associated membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2725]
2. kif5aa ENSDARG00000098936 2428 3.52 0.869 0.758 - - - 0.899 0.994 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
3. vamp2 ENSDARG00000056877 2158 2.788 0.897 - - - - 0.894 0.997 - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
4. TUBB8P7 TUBB8P7 1353 2.781 0.850 - - - - 0.936 0.995 - -
5. TUBB8P7_1 TUBB8P7_1 2722 2.751 0.957 0.823 - - - 0.971 - - -
6. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.748 0.897 0.900 - - - 0.951 - - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
7. lgi2a ENSDARG00000111069 965 2.704 - - - - - 0.874 0.993 0.837 - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
8. cdk5r1b ENSDARG00000045087 2075 2.695 0.807 0.900 - - - 0.988 - - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
9. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.671 0.873 0.866 - - - 0.932 - - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
10. cspg5a ENSDARG00000069981 1699 2.657 0.885 0.870 - - - 0.902 - - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
11. aplp1 ENSDARG00000098368 2317 2.647 0.863 0.907 - - - 0.877 - - - amyloid beta (A4) precursor-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-040319-1]
12. gfap ENSDARG00000025301 5584 2.645 0.936 - - - - 0.958 - - 0.751 glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
13. mllt11 ENSDARG00000071026 2518 2.644 0.947 0.736 - - - 0.961 - - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
14. ppp3ca ENSDARG00000004988 615 2.639 0.920 0.926 - - - 0.793 - - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
15. adam11 ENSDARG00000079204 298 2.609 0.883 0.850 - - - 0.876 - - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
16. INA INA 950 2.597 0.867 0.741 - - - 0.989 - - -
17. lfng ENSDARG00000037879 11783 2.59 0.857 0.802 - - - 0.931 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
18. snap25a ENSDARG00000020609 4537 2.585 0.914 0.705 - - - 0.966 - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
19. gap43 ENSDARG00000099744 4114 2.582 0.923 0.723 - - - 0.936 - - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
20. rab3ab ENSDARG00000043835 1267 2.578 0.916 0.709 - - - 0.953 - - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
21. adcyap1b ENSDARG00000027740 1539 2.568 0.868 0.781 - - - 0.919 - - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
22. rheb ENSDARG00000090213 1432 2.562 0.818 0.846 - - - 0.898 - - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
23. nbeaa ENSDARG00000070080 862 2.559 0.935 0.758 - - - 0.866 - - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
24. epha4b ENSDARG00000011600 3110 2.559 0.917 0.710 - - - 0.932 - - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
25. cplx2l ENSDARG00000018997 3975 2.554 0.913 0.858 - - - - - - 0.783 complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
26. Sep-03 Sep-03 1124 2.55 0.718 0.902 - - - 0.930 - - -
27. calb1 ENSDARG00000031598 252 2.549 0.800 - - - - 0.867 - 0.882 - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
28. EPB41L1 EPB41L1 1896 2.545 0.881 0.718 - - - 0.946 - - -
29. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.529 0.893 0.705 - - - 0.931 - - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
30. fgf13b ENSDARG00000056633 455 2.528 0.850 0.713 - - - 0.965 - - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
31. C7H4orf48 C7H4orf48 1455 2.498 0.809 0.793 - - - 0.896 - - -
32. pou4f1 ENSDARG00000005559 821 2.484 0.885 - - - - 0.868 - 0.731 - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
33. msi1 ENSDARG00000010710 2634 2.481 0.763 0.784 - - - 0.934 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
34. sh3gl2 sh3gl2 1305 2.456 0.775 0.732 - - - 0.949 - - -
35. scrt1a ENSDARG00000100821 2687 2.449 0.754 0.722 - - - 0.973 - - - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
36. eno2 ENSDARG00000014287 2162 2.425 0.865 0.730 - - - 0.830 - - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
37. hnrnpab hnrnpab 72354 2.397 0.723 - - - - 0.823 0.851 - -
38. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.36 0.726 0.847 - - - 0.787 - - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
39. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.357 0.722 0.751 - - - 0.884 - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
40. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.35 0.705 0.731 - - - 0.914 - - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
41. NPAS3 ENSDARG00000109820 362 2.342 0.802 - - - 0.741 0.799 - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
42. ptprnb ENSDARG00000077047 2743 2.335 0.845 - - - - 0.775 - 0.715 - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
43. rgs20 ENSDARG00000038859 331 2.306 0.702 - - - - 0.778 - 0.826 - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
44. cldn19 ENSDARG00000044569 281 2.282 0.734 0.722 - - - 0.826 - - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
45. st8sia5 ENSDARG00000036584 529 2.259 0.790 0.720 - - - 0.749 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
46. syt12 ENSDARG00000101776 215 2.246 0.737 - - - 0.746 0.763 - - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
47. efna3b ENSDARG00000098295 319 2.205 0.706 0.737 - - - 0.762 - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
48. C19H7orf41 C19H7orf41 2243 2.192 0.747 0.710 - - - 0.735 - - -
49. SPOCK1 ENSDARG00000074644 794 1.935 0.966 - - - - 0.969 - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
50. tuba1c ENSDARG00000055216 8384 1.918 0.942 - - - - 0.976 - - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
51. stx1b ENSDARG00000000503 2724 1.901 0.910 - - - - 0.991 - - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
52. nefmb ENSDARG00000043697 2052 1.897 0.954 - - - - 0.943 - - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
53. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.889 0.942 - - - - 0.947 - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
54. scrt2 ENSDARG00000056175 4331 1.887 0.934 - - - - 0.953 - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
55. zbtb18 ENSDARG00000028228 3653 1.886 - - - - - 0.892 0.994 - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
56. dnajc5aa ENSDARG00000042948 2885 1.876 0.897 - - - - 0.979 - - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
57. nadl1.1 1200 1.875 0.928 - - - - 0.947 - - - neural adhesion molecule L1.1, transcript variant X1
58. pax6a ENSDARG00000103379 3061 1.872 0.881 - - - - 0.991 - - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
59. scn8aa ENSDARG00000005775 792 1.871 0.895 - - - - 0.976 - - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
60. inab ENSDARG00000053248 3239 1.87 0.881 - - - - 0.989 - - - internexin neuronal intermediate filament protein, alpha b [Source:ZFIN;Acc:ZDB-GENE-990415-83]
61. stmn2b ENSDARG00000070537 1586 1.868 0.913 - - - - 0.955 - - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
62. slc1a3a ENSDARG00000104431 9888 1.865 0.919 - - - - 0.946 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
63. dpysl3 ENSDARG00000002587 4381 1.865 0.891 - - - - 0.974 - - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
64. JPH3 ENSDARG00000102204 283 1.864 0.941 - - - - 0.923 - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
65. nova2 ENSDARG00000017673 7685 1.861 0.882 - - - - 0.979 - - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
66. negr1 ENSDARG00000021607 1051 1.852 0.919 - - - - 0.933 - - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
67. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 1.852 0.939 - - - - 0.913 - - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
68. ckbb ENSDARG00000043257 3503 1.849 0.866 - - - - 0.983 - - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
69. atp1a3a ENSDARG00000018259 5393 1.847 0.880 - - - - 0.967 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
70. amph ENSDARG00000007663 599 1.847 0.940 - - - - 0.907 - - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
71. kcnc3a ENSDARG00000055855 1821 1.845 0.862 - - - - 0.983 - - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
72. dbx2 2971 1.839 0.949 - - - - 0.890 - - - developing brain homeobox 2
73. nefma ENSDARG00000021351 790 1.839 0.896 - - - - 0.943 - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
74. sncb ENSDARG00000104945 8197 1.837 0.854 - - - - 0.983 - - - synuclein, beta [Source:ZFIN;Acc:ZDB-GENE-040426-1615]
75. irx3a ENSDARG00000101076 3106 1.837 0.842 - - - - - 0.995 - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
76. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.836 0.894 - - - - 0.942 - - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
77. AGO1 ENSDARG00000092644 4521 1.832 0.903 - - - - 0.929 - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
78. UBE2QL1 ENSDARG00000079276 3474 1.828 0.917 - - - - 0.911 - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
79. adam23a ENSDARG00000062323 580 1.825 0.886 - - - - 0.939 - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
80. C8H1orf106 C8H1orf106 2690 1.821 0.944 - - - - 0.877 - - -
81. atp6v0cb ENSDARG00000036577 3472 1.82 0.870 - - - - 0.950 - - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
82. clstn3 ENSDARG00000073883 590 1.818 0.850 - - - - 0.968 - - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
83. slc8a2b ENSDARG00000100592 598 1.816 0.909 - - - - 0.907 - - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
84. prrt1 ENSDARG00000062208 368 1.816 0.968 - - - - 0.848 - - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
85. scube2 ENSDARG00000037362 2833 1.813 0.919 - - - - 0.894 - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
86. MAPK8IP1_1 MAPK8IP1_1 186 1.813 0.953 - - - - 0.860 - - -
87. bhlhe22 ENSDARG00000058039 1673 1.812 0.965 - - - - 0.847 - - - basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
88. rbfox3 rbfox3 1443 1.811 0.853 - - - - 0.958 - - -
89. meis1 meis1 6937 1.81 0.815 - - - - - 0.995 - -
90. slc1a2b ENSDARG00000102453 3136 1.81 0.849 - - - - 0.961 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
91. gng3 ENSDARG00000009553 2530 1.809 0.916 - - - - 0.893 - - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
92. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.809 0.867 - - - - 0.942 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
93. pcdh1gc5 ENSDARG00000104826 10052 1.808 0.869 - - - - 0.939 - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
94. MAP1B ENSDARG00000060434, ENSDARG00000113782 1983 1.806 0.867 - - - - 0.939 - - - microtubule-associated protein 1B [Source:ZFIN;Acc:ZDB-GENE-130530-690]
95. neurog1 ENSDARG00000056130 3924 1.806 0.907 - - - - 0.899 - - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
96. sncgb ENSDARG00000109715 1014 1.799 0.861 - - - - 0.938 - - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
97. EFCC1 ENSDARG00000077826 1359 1.799 0.892 - - - - 0.907 - - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
98. MAP1A MAP1A 847 1.799 0.863 - - - - 0.936 - - -
99. vim ENSDARG00000010008 3551 1.798 0.867 - - - - 0.931 - - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
100. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 1.796 0.857 - - - - 0.939 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]

There are 1708 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA