Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for valopb

Gene Name Gene ID Reads Annotation
valopb ENSDARG00000054181, ENSDARG00000110871 2 vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]










Genes with expression patterns similar to valopb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. valopb ENSDARG00000054181, ENSDARG00000110871 2 3 - 1.000 - 1.000 - 1.000 - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
2. si:ch211-13o20.1 si:ch211-13o20.1 30 2 - - - 1.000 - 1.000 - - -
3. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 2 - 1.000 - - - 1.000 - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
4. pcdh2g12 5 2 - 1.000 - - - 1.000 - - - protocadherin 2 gamma 12
5. C25H11orf74 C25H11orf74 161 1.978 - 0.978 - - - 1.000 - - -
6. tmem174 ENSDARG00000035388 2 1.976 - - - 0.976 - 1.000 - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
7. CT573248.1 ENSDARG00000074029 10 1.925 - - - 1.000 - 0.925 - - -
8. si:dkey-79c1.1 ENSDARG00000093179 11 1.796 - - - 0.796 - 1.000 - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
9. igfbp6b ENSDARG00000090833 37 1.717 - 0.717 - - - 1.000 - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
10. glipr2 ENSDARG00000041724 41 1.623 - 0.887 - - - 0.736 - - - GLI pathogenesis-related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4424]
11. XAF1 ENSDARG00000068939 12 1.533 - 0.707 - - - 0.826 - - - XIAP associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-060929-840]
12. si:dkey-60a16.4 si:dkey-60a16.4 14 1 - - - 1.000 - - - - -
13. nog2 ENSDARG00000043066 233 1 - 1.000 - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
14. CR749167.1 ENSDARG00000100165 38 1 - - - - - 1.000 - - -
15. fam221a ENSDARG00000027599 1 1 - - - 1.000 - - - - - family with sequence similarity 221, member A [Source:ZFIN;Acc:ZDB-GENE-050320-27]
16. CABZ01023601.1 CABZ01023601.1 1 1 - - - - - 1.000 - - -
17. H2AFX_1 H2AFX_1 28 1 - - - - - 1.000 - - -
18. U6_29 U6_29 0 1 - - - - - 1.000 - - -
19. cx30.9 ENSDARG00000070362 17 1 - - - - - 1.000 - - - connexin 30.9 [Source:ZFIN;Acc:ZDB-GENE-050616-2]
20. BX005472.1 BX005472.1 2 1 - - - 1.000 - - - - -
21. si:ch211-259i2.2 si:ch211-259i2.2 45 1 - 1.000 - - - - - - -
22. sstr3 ENSDARG00000014477 14 1 - 1.000 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
23. si:dkey-162h11.3 41 1 - - - - - 1.000 - - - si:dkey-162h11.3, transcript variant X2
24. FAM155A ENSDARG00000075858 1 1 - - - - - 1.000 - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
25. si:dkey-52l1.1 si:dkey-52l1.1 1 1 - - - - - 1.000 - - -
26. CU550716.4 CU550716.4 14 1 - - - - - 1.000 - - -
27. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
28. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - - - 1.000 - - -
29. si:ch211-249h16.8 ENSDARG00000093630 1 1 - - - - - 1.000 - - - si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36]
30. UBASH3B_1 UBASH3B_1 28 1 - - - - - 1.000 - - -
31. PHF1 ENSDARG00000057439 1 1 - 1.000 - - - - - - - PHD finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-100922-277]
32. mst1rb ENSDARG00000004871, ENSDARG00000116535 1 1 - - - - - 1.000 - - - macrophage stimulating 1 receptor b [Source:ZFIN;Acc:ZDB-GENE-071218-3]
33. PEG3_17 PEG3_17 15 1 - - - - - 1.000 - - -
34. snai3 ENSDARG00000031243 31 1 - 1.000 - - - - - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
35. opn1mw4 ENSDARG00000000638 2 1 - 1.000 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]
36. si:dkeyp-35f11.2 si:dkeyp-35f11.2 0 1 - - - - - 1.000 - - -
37. crx ENSDARG00000011989, ENSDARG00000113850 330 1 - - - - - 1.000 - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
38. si:dkey-270m17.3 si:dkey-270m17.3 1 1 - 1.000 - - - - - - -
39. KLHDC3 ENSDARG00000102772 14 1 - 1.000 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
40. ribc1 ENSDARG00000055739 32 1 - - - - - 1.000 - - - RIB43A domain with coiled-coils 1 [Source:ZFIN;Acc:ZDB-GENE-081031-7]
41. CR848836.4 CR848836.4 4 1 - 1.000 - - - - - - -
42. BX248496.1 BX248496.1 0 1 - - - - - 1.000 - - -
43. v2rh13 ENSDARG00000088192 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h13 [Source:ZFIN;Acc:ZDB-GENE-050419-264]
44. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - 1.000 - - -
45. CU633740.1 CU633740.1 8 1 - - - - - 1.000 - - -
46. SNORD65_1 SNORD65_1 25 1 - 1.000 - - - - - - -
47. CABZ01079251.1 ENSDARG00000100498 38 1 - 1.000 - - - - - - - myeloid-associated differentiation marker-like [Source:NCBI gene;Acc:100536607]
48. CU915778.1 ENSDARG00000099025 40 1 - - - - - 1.000 - - -
49. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - 1.000 - - - - - - -
50. TRIM14_3 TRIM14_3 7 1 - - - 1.000 - - - - -
51. si:ch73-44m9.2 ENSDARG00000094821 101 1 - 1.000 - - - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
52. slco1f4 ENSDARG00000101014 0 1 - - - - - 1.000 - - - solute carrier organic anion transporter family, member 1F4 [Source:ZFIN;Acc:ZDB-GENE-070112-2172]
53. CU570691.1 ENSDARG00000088908 5 1 - - - - - 1.000 - - -
54. akt3a ENSDARG00000104810 21 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
55. CR354382.1 CR354382.1 42 1 - - - - - 1.000 - - -
56. QSOX2 ENSDARG00000077174 26 1 - - - - - 1.000 - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
57. spi1b ENSDARG00000000767 88 1 - 1.000 - - - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
58. zgc:92275 ENSDARG00000034048 9 1 - - - - - 1.000 - - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
59. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - 1.000 - - - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
60. C13H10orf53 C13H10orf53 3 1 - - - - - 1.000 - - -
61. cacng5a ENSDARG00000003326 17 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
62. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
63. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
64. LINS LINS 42 1 - 1.000 - - - - - - -
65. zgc:154125 ENSDARG00000071463 7 1 - - - - - 1.000 - - - zgc:154125 [Source:ZFIN;Acc:ZDB-GENE-061013-717]
66. si:ch73-91k6.1 18 1 - 1.000 - - - - - - - si:ch73-91k6.1
67. msh6 ENSDARG00000104541 197 1 - - - - - 1.000 - - - mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
68. si:dkey-199f5.4 ENSDARG00000110483 4 1 - - - - - 1.000 - - - si:dkey-199f5.4 [Source:ZFIN;Acc:ZDB-GENE-100922-53]
69. BX927317.3 ENSDARG00000117757 1 1 - - - 1.000 - - - - -
70. si:ch211-280c4.3 si:ch211-280c4.3 0 1 - - - - - 1.000 - - -
71. si:dkey-39e8.5 si:dkey-39e8.5 2 1 - - - - - 1.000 - - -
72. si:ch211-197e7.1 ENSDARG00000095200 1 1 - - - - - 1.000 - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
73. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - 1.000 - - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
74. CABZ01067727.1 CABZ01067727.1 2 1 - - - - - 1.000 - - -
75. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - 1.000 - - - - - - -
76. C3AR1 18 1 - - - - - 1.000 - - - C3a anaphylatoxin chemotactic receptor
77. pdx1 ENSDARG00000002779, ENSDARG00000109275 28 1 - - - - - 1.000 - - - pancreatic and duodenal homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-990415-122]
78. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6
79. si:ch211-222b21.5 si:ch211-222b21.5 10 1 - - - - - 1.000 - - -
80. si:ch73-233m11.2 ENSDARG00000091859 2 1 - - - 1.000 - - - - - si:ch73-233m11.2 [Source:ZFIN;Acc:ZDB-GENE-081104-266]
81. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
82. zgc:195075 ENSDARG00000060049 4 1 - - - 1.000 - - - - - zgc:195075 [Source:ZFIN;Acc:ZDB-GENE-080723-70]
83. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
84. SNORD89 SNORD89 1 1 - - - - - 1.000 - - -
85. abcc13 ENSDARG00000062519 2 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
86. tcf23 ENSDARG00000087381 6 1 - - - - - 1.000 - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
87. FNBP1_1 FNBP1_1 3 1 - 1.000 - - - - - - -
88. entpd8 ENSDARG00000005565 18 1 - - - - - 1.000 - - - ectonucleoside triphosphate diphosphohydrolase 8 [Source:ZFIN;Acc:ZDB-GENE-040724-142]
89. CT868708.1 ENSDARG00000097601 2 1 - - - - - 1.000 - - -
90. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
91. ccr12.2 ccr12.2 2 1 - - - - - 1.000 - - -
92. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - 1.000 - - - - - - -
93. chp1 ENSDARG00000052859 34 1 - 1.000 - - - - - - - calcineurin-like EF-hand protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4086]
94. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - 1.000 - - - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
95. zgc:175248 ENSDARG00000104153 1 1 - - - 1.000 - - - - - zgc:175248 [Source:ZFIN;Acc:ZDB-GENE-080204-93]
96. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - 1.000 - - -
97. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - - 1.000 - - -
98. gcdhl gcdhl 38 1 - - - - - 1.000 - - -
99. cx55.5 13 1 - - - - - 1.000 - - - connexin 55.5, transcript variant X1
100. cep78 ENSDARG00000039229 1 1 - - - - - 1.000 - - - centrosomal protein 78 [Source:ZFIN;Acc:ZDB-GENE-070905-1]

There are 632 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA