Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for valopb

Gene Name Gene ID Reads Annotation
valopb ENSDARG00000054181, ENSDARG00000110871 2 vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]










Genes with expression patterns similar to valopb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. valopb ENSDARG00000054181, ENSDARG00000110871 2 3 - 1.000 - 1.000 - 1.000 - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
2. si:ch211-13o20.1 si:ch211-13o20.1 30 2 - - - 1.000 - 1.000 - - -
3. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 2 - 1.000 - - - 1.000 - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
4. pcdh2g12 5 2 - 1.000 - - - 1.000 - - - protocadherin 2 gamma 12
5. C25H11orf74 C25H11orf74 161 1.978 - 0.978 - - - 1.000 - - -
6. tmem174 ENSDARG00000035388 2 1.976 - - - 0.976 - 1.000 - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
7. CT573248.1 ENSDARG00000074029 10 1.925 - - - 1.000 - 0.925 - - -
8. si:dkey-79c1.1 ENSDARG00000093179 11 1.796 - - - 0.796 - 1.000 - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
9. igfbp6b ENSDARG00000090833 37 1.717 - 0.717 - - - 1.000 - - - insulin-like growth factor binding protein 6b [Source:ZFIN;Acc:ZDB-GENE-090521-2]
10. glipr2 ENSDARG00000041724 41 1.623 - 0.887 - - - 0.736 - - - GLI pathogenesis-related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4424]
11. XAF1 ENSDARG00000068939 12 1.533 - 0.707 - - - 0.826 - - - XIAP associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-060929-840]
12. aspdh ENSDARG00000038297 39 1 - - - 1.000 - - - - - aspartate dehydrogenase domain containing [Source:ZFIN;Acc:ZDB-GENE-040912-102]
13. rspo4 ENSDARG00000038593 3 1 - - - - - 1.000 - - - R-spondin 4 [Source:ZFIN;Acc:ZDB-GENE-110103-2]
14. si:dkey-105f21.1 si:dkey-105f21.1 5 1 - - - - - 1.000 - - -
15. si:rp71-68n21.9 ENSDARG00000067751 7 1 - - - - - 1.000 - - - si:rp71-68n21.9 [Source:ZFIN;Acc:ZDB-GENE-081105-100]
16. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - 1.000 - - -
17. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
18. si:dkey-190j3.4 ENSDARG00000100743 1 1 - - - - - 1.000 - - - si:dkey-190j3.4 [Source:ZFIN;Acc:ZDB-GENE-070424-218]
19. si:dkey-266h18.3 si:dkey-266h18.3 4 1 - 1.000 - - - - - - -
20. CU633740.1 CU633740.1 8 1 - - - - - 1.000 - - -
21. ZBED1_4 ZBED1_4 2 1 - 1.000 - - - - - - -
22. rnf217 ENSDARG00000060944 10 1 - - - - - 1.000 - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
23. si:ch73-44m9.2 ENSDARG00000094821 101 1 - 1.000 - - - - - - - si:ch73-44m9.2 [Source:ZFIN;Acc:ZDB-GENE-081031-72]
24. crygm2d13 ENSDARG00000057460 1093 1 - - - - - 1.000 - - - crystallin, gamma M2d13 [Source:ZFIN;Acc:ZDB-GENE-040718-105]
25. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - 1.000 - - - si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
26. diaph3 ENSDARG00000090785 16 1 - - - - - 1.000 - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
27. si:ch211-53m15.1 si:ch211-53m15.1 28 1 - - - - - 1.000 - - -
28. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
29. blnk ENSDARG00000042722 56 1 - 1.000 - - - - - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
30. crx ENSDARG00000011989, ENSDARG00000113850 330 1 - - - - - 1.000 - - - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]
31. msh6 ENSDARG00000104541 197 1 - - - - - 1.000 - - - mutS homolog 6 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-020905-3]
32. v2rh13 ENSDARG00000088192 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h13 [Source:ZFIN;Acc:ZDB-GENE-050419-264]
33. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 - - - - - 1.000 - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
34. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - 1.000 - - - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
35. zgc:174919 zgc:174919 24 1 - 1.000 - - - - - - -
36. chp1 ENSDARG00000052859 34 1 - 1.000 - - - - - - - calcineurin-like EF-hand protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4086]
37. si:dkeyp-89c11.1 si:dkeyp-89c11.1 11 1 - 1.000 - - - - - - -
38. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
39. GPR113 GPR113 0 1 - - - - - 1.000 - - -
40. cnga3b ENSDARG00000012297 2 1 - - - 1.000 - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
41. ZDHHC12 ZDHHC12 29 1 - 1.000 - - - - - - -
42. RAB27B ENSDARG00000087762 3 1 - - - 1.000 - - - - - RAB27B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-120215-85]
43. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 1 - 1.000 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
44. si:dkeyp-46h3.6 ENSDARG00000087363 14 1 - - - - - 1.000 - - - si:dkeyp-46h3.6 [Source:ZFIN;Acc:ZDB-GENE-060503-90]
45. gnal ENSDARG00000045415 164 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type [Source:ZFIN;Acc:ZDB-GENE-041114-26]
46. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - 1.000 - - - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
47. zgc:103559 ENSDARG00000038293 1 1 - - - - - 1.000 - - - zgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
48. BX682552.2_1 BX682552.2_1 37 1 - - - - - 1.000 - - -
49. FAM155A ENSDARG00000075858 1 1 - - - - - 1.000 - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
50. cel.2 ENSDARG00000029822 0 1 - - - - - 1.000 - - - carboxyl ester lipase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061110-10]
51. opn1mw4 ENSDARG00000000638 2 1 - 1.000 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]
52. sftpbb ENSDARG00000067566 13 1 - - - - - 1.000 - - - surfactant protein Bb [Source:ZFIN;Acc:ZDB-GENE-060526-155]
53. CR735107.4 CR735107.4 0 1 - - - - - 1.000 - - -
54. abch1 ENSDARG00000071341 1 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family H, member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-42]
55. si:dkey-162h11.3 41 1 - - - - - 1.000 - - - si:dkey-162h11.3, transcript variant X2
56. sstr3 ENSDARG00000014477 14 1 - 1.000 - - - - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
57. PPP2R2A PPP2R2A 50 1 - 1.000 - - - - - - -
58. trim35-38 trim35-38 3 1 - 1.000 - - - - - - -
59. LRRTM4 2 1 - - - - - 1.000 - - - leucine rich repeat transmembrane neuronal 4
60. PIK3CA ENSDARG00000075456 39 1 - - - - - 1.000 - - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha [Source:ZFIN;Acc:ZDB-GENE-130409-1]
61. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 - - - - - 1.000 - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
62. olfch1 ENSDARG00000100026 3 1 - - - - - 1.000 - - - olfactory receptor C family, h1 [Source:ZFIN;Acc:ZDB-GENE-060503-819]
63. slc23a3 ENSDARG00000088891 47 1 - - - - - 1.000 - - - solute carrier family 23, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-714]
64. gcgrb ENSDARG00000036272 54 1 - - - - - 1.000 - - - glucagon receptor b [Source:ZFIN;Acc:ZDB-GENE-050516-2]
65. si:ch73-91k6.1 18 1 - 1.000 - - - - - - - si:ch73-91k6.1
66. LECT2 LECT2 4 1 - 1.000 - - - - - - -
67. CR354540.1 ENSDARG00000004051 10 1 - - - - - 1.000 - - - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
68. CABZ01023601.1 CABZ01023601.1 1 1 - - - - - 1.000 - - -
69. CABZ01034126.1 CABZ01034126.1 2 1 - 1.000 - - - - - - -
70. klc1a ENSDARG00000009796 10 1 - - - - - 1.000 - - - kinesin light chain 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1599]
71. si:ch211-101n13.1 si:ch211-101n13.1 68 1 - 1.000 - - - - - - -
72. si:ch211-238e22.8 ENSDARG00000104804, ENSDARG00000105161 0 1 - - - - - 1.000 - - - si:ch211-238e22.8 [Source:ZFIN;Acc:ZDB-GENE-050419-231]
73. mctp1b ENSDARG00000060871 20 1 - 1.000 - - - - - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
74. polr2b ENSDARG00000098783 90 1 - 1.000 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
75. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - 1.000 - - -
76. si:dkeyp-53e4.3 si:dkeyp-53e4.3 0 1 - - - - - 1.000 - - -
77. si:ch73-25f10.6 ENSDARG00000091932 1 1 - 1.000 - - - - - - - si:ch73-25f10.6 [Source:ZFIN;Acc:ZDB-GENE-100922-192]
78. CABZ01071909.1 ENSDARG00000117524 2 1 - 1.000 - - - - - - -
79. si:dkey-60a16.4 si:dkey-60a16.4 14 1 - - - 1.000 - - - - -
80. fam221a ENSDARG00000027599 1 1 - - - 1.000 - - - - - family with sequence similarity 221, member A [Source:ZFIN;Acc:ZDB-GENE-050320-27]
81. stxbp4 ENSDARG00000076997 20 1 - - - - - 1.000 - - - syntaxin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-110420-5]
82. TRIM14_3 TRIM14_3 7 1 - - - 1.000 - - - - -
83. FAM149A ENSDARG00000073709 7 1 - - - - - 1.000 - - - family with sequence similarity 149 member A [Source:ZFIN;Acc:ZDB-GENE-081107-36]
84. abcc13 ENSDARG00000062519 2 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
85. CABZ01034707.1 CABZ01034707.1 122 1 - 1.000 - - - - - - -
86. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - - 1.000 - - -
87. si:dkeyp-75d2.5 si:dkeyp-75d2.5 21 1 - - - - - 1.000 - - -
88. slco1f4 ENSDARG00000101014 0 1 - - - - - 1.000 - - - solute carrier organic anion transporter family, member 1F4 [Source:ZFIN;Acc:ZDB-GENE-070112-2172]
89. si:dkey-39e8.5 si:dkey-39e8.5 2 1 - - - - - 1.000 - - -
90. CU570691.1 ENSDARG00000088908 5 1 - - - - - 1.000 - - -
91. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
92. PEG3_17 PEG3_17 15 1 - - - - - 1.000 - - -
93. fgf22 ENSDARG00000076510, ENSDARG00000114053, ENSDARG00000115407 3 1 - - - - - 1.000 - - - fibroblast growth factor 22 [Source:ZFIN;Acc:ZDB-GENE-050208-380]
94. pdgfrb ENSDARG00000100897 0 1 - - - - - 1.000 - - - platelet-derived growth factor receptor, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030805-2]
95. CABZ01067727.1 CABZ01067727.1 2 1 - - - - - 1.000 - - -
96. slc9a5 ENSDARG00000078560 76 1 - 1.000 - - - - - - - solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5 [Source:ZFIN;Acc:ZDB-GENE-080225-43]
97. robo2 ENSDARG00000014891, ENSDARG00000078366 23 1 - 1.000 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
98. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - 1.000 - - -
99. si:ch211-272h9.2 si:ch211-272h9.2 1 1 - - - - - 1.000 - - -
100. eif4e1b ENSDARG00000014565 12 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]

There are 632 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA