Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for utp3

Gene Name Gene ID Reads Annotation
utp3 ENSDARG00000056720 922 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]










Genes with expression patterns similar to utp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. utp3 ENSDARG00000056720 922 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
2. fignl1 ENSDARG00000016427 636 2.491 - 0.750 - - - 0.863 0.878 - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
3. pole ENSDARG00000058533, ENSDARG00000115430 381 2.488 0.908 - - - - 0.729 - 0.851 - polymerase (DNA directed), epsilon [Source:ZFIN;Acc:ZDB-GENE-070705-557]
4. prrg4 ENSDARG00000030753 1008 2.411 0.765 - - - - - 0.751 0.895 - proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) [Source:ZFIN;Acc:ZDB-GENE-050417-112]
5. pelo ENSDARG00000055477 1927 2.333 - 0.755 - 0.708 - - - 0.870 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
6. flrt3 ENSDARG00000076895 3516 2.324 - - - - 0.831 0.789 - 0.704 - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
7. qki2 ENSDARG00000010018 2230 2.312 0.705 - - - - 0.708 - 0.899 - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
8. AL954697.2 AL954697.2 1809 2.26 0.850 - - - 0.709 - 0.701 - -
9. cdan1 ENSDARG00000042261 658 1.896 - - - - 0.991 - - 0.905 - codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
10. mier1a ENSDARG00000041072 1690 1.886 - - - - 0.967 - - 0.919 - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
11. arfrp1 ENSDARG00000057857 2840 1.845 0.910 - - - 0.935 - - - - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
12. nek1 ENSDARG00000022350 158 1.84 0.903 - - - - - 0.937 - - NIMA-related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040730-1]
13. ap2m1b ENSDARG00000033899 317 1.839 0.911 - - - - - - 0.928 - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
14. zgc:111974 zgc:111974 1386 1.835 - - - - 0.983 - - 0.852 -
15. smurf2 ENSDARG00000038067 2057 1.832 - - - - 0.987 - - 0.845 - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
16. ddx49 ENSDARG00000012899 1604 1.83 0.859 - - - 0.971 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
17. adi1 ENSDARG00000020448 1402 1.82 - - - - 0.987 - - 0.833 - acireductone dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2799]
18. rassf10a 417 1.811 0.820 - - - 0.991 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
19. exd3 ENSDARG00000063140 119 1.808 0.911 - - - - - - 0.897 - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
20. ehd3 ENSDARG00000007869 3238 1.804 0.865 - - - 0.939 - - - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
21. si:dkey-19e4.5 ENSDARG00000089886 2562 1.8 - - - - 0.983 - - 0.817 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
22. arid1ab ENSDARG00000101891 1722 1.799 - - - - 0.982 0.817 - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
23. gpr37l1a ENSDARG00000006079 422 1.796 0.883 - - - - - - 0.913 - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
24. pdcd2l ENSDARG00000002754 417 1.792 - - - - 0.985 0.807 - - - programmed cell death 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-967]
25. PRRG1 ENSDARG00000043283 2779 1.791 - - - - 0.959 - - 0.832 - proline rich Gla (G-carboxyglutamic acid) 1 [Source:ZFIN;Acc:ZDB-GENE-041010-20]
26. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.788 0.827 - - - 0.961 - - - - ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
27. samd1b ENSDARG00000079062 280 1.786 - - - - - 0.864 0.922 - - sterile alpha motif domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-090313-2]
28. dpy19l1l ENSDARG00000069995 584 1.784 - - - - - - 0.890 0.894 - dpy-19-like 1, like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030521-11]
29. Mar-06 Mar-06 953 1.773 0.902 - - - - - - 0.871 -
30. flot2a ENSDARG00000004830 5276 1.771 0.864 - - - 0.907 - - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
31. ncaph2 ENSDARG00000033757 1042 1.769 - - - - 0.987 - - 0.782 - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
32. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.758 - - - - 0.930 0.828 - - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
33. rrp7a ENSDARG00000098934 1123 1.754 0.901 - - - 0.853 - - - - ribosomal RNA processing 7 homolog A [Source:ZFIN;Acc:ZDB-GENE-050417-38]
34. me3 ENSDARG00000002305 3305 1.749 0.930 - - - - - - 0.819 - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
35. brd8 ENSDARG00000025071 2605 1.745 - 0.785 - - 0.960 - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
36. cwc25 ENSDARG00000003382 2134 1.745 0.861 - - - - - - 0.884 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
37. syt5b ENSDARG00000011640 70 1.74 - - - - - - 0.839 0.901 - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
38. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 1.739 - - - - - 0.841 - 0.898 - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
39. pmela ENSDARG00000091298 5179 1.734 0.861 - - - 0.873 - - - - premelanosome protein a [Source:ZFIN;Acc:ZDB-GENE-030131-9818]
40. si:ch211-161h7.4 ENSDARG00000087238 4399 1.728 0.843 - - - 0.885 - - - - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
41. arhgef1b ENSDARG00000055837 2330 1.728 0.769 - - - 0.959 - - - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
42. cpt1a cpt1a 674 1.726 0.839 - - - - - - 0.887 -
43. med22 ENSDARG00000014148 1307 1.723 - - - - - - 0.811 0.912 - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
44. UIMC1_1 UIMC1_1 430 1.722 - - - - - 0.830 0.892 - -
45. zcchc10 ENSDARG00000091092 1333 1.717 - - - - - 0.805 - 0.912 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
46. atp1a1a.2 ENSDARG00000007739 121 1.717 0.768 - - - - - 0.949 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-001212-2]
47. daxx ENSDARG00000000729 734 1.716 - - - - - 0.788 - 0.928 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
48. dvl2 ENSDARG00000056184 1525 1.716 0.870 - - - - - - 0.846 - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
49. PACS1 PACS1 2061 1.714 - 0.736 - - 0.978 - - - -
50. chst13 chst13 669 1.714 - - - - - 0.784 0.930 - -
51. ctnnd2b ENSDARG00000003779 964 1.713 - - - - 0.988 - - 0.725 - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
52. ranbp1 ENSDARG00000014817 3371 1.713 0.744 - - - 0.969 - - - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
53. lhx2b ENSDARG00000031222 517 1.707 - - - - - - 0.942 0.765 - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
54. fam129ba ENSDARG00000062970 1578 1.706 - - - - 0.978 - - 0.728 - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
55. ppat ENSDARG00000004517 3349 1.705 - - - - 0.917 - - 0.788 - phosphoribosyl pyrophosphate amidotransferase [Source:ZFIN;Acc:ZDB-GENE-041210-323]
56. si:ch211-282k23.2 ENSDARG00000093591 447 1.705 - - - - 0.988 0.717 - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
57. dhx9 ENSDARG00000079725 1241 1.697 - 0.713 - - 0.984 - - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
58. rybpa ENSDARG00000037773 904 1.69 - - - - 0.989 - - 0.701 - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
59. C1H4orf27 C1H4orf27 1961 1.689 0.861 - - - - - - 0.828 -
60. zic5 ENSDARG00000016022 1034 1.687 - - - - - 0.819 - 0.868 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
61. si:dkey-25o16.2 1990 1.686 - 0.736 - - 0.950 - - - - si:dkey-25o16.2, transcript variant X1
62. CABZ01073174.1 CABZ01073174.1 581 1.686 0.789 - - - - - - 0.897 -
63. coil ENSDARG00000040070 863 1.685 - - - - 0.893 0.792 - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
64. nup98 ENSDARG00000074955 3998 1.684 - - - - 0.979 - - 0.705 - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
65. spata2 ENSDARG00000063250 501 1.678 - - - - - 0.727 0.951 - - spermatogenesis associated 2 [Source:ZFIN;Acc:ZDB-GENE-070822-5]
66. capn7 ENSDARG00000102987 386 1.674 0.792 - - - - - - 0.882 - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
67. cplx4c ENSDARG00000094889 253 1.674 - - - - - 0.774 - 0.900 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
68. E2F2 E2F2 871 1.674 - - - - - - 0.748 0.926 -
69. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 1.67 - - - - 0.794 - - 0.876 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
70. vhl ENSDARG00000070617 663 1.667 - - - - - 0.762 - 0.905 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
71. znf839 ENSDARG00000076988 1032 1.664 - - - 0.798 - - 0.866 - - zinc finger protein 839 [Source:ZFIN;Acc:ZDB-GENE-030131-4936]
72. nop16 ENSDARG00000044402 3645 1.663 - - - - 0.859 - - 0.804 - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
73. hiat1b ENSDARG00000043055 757 1.658 - - - - - 0.759 - 0.899 - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
74. zhx2 zhx2 365 1.658 - - - - - 0.765 - 0.893 -
75. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 1.655 0.885 - - - - 0.770 - - - CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
76. hprt1 ENSDARG00000008884, ENSDARG00000117138 2486 1.653 0.934 0.719 - - - - - - - hypoxanthine phosphoribosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1918]
77. arl6ip4 ENSDARG00000105036, ENSDARG00000110324, ENSDARG00000116805 1142 1.653 0.907 - - - - 0.746 - - - ADP-ribosylation factor-like 6 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-405]
78. hmcn2 ENSDARG00000079327, ENSDARG00000086060 1075 1.652 - - - - - 0.712 0.940 - - hemicentin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9765]
79. ireb2 ENSDARG00000021466 699 1.65 - - - - - 0.752 - 0.898 - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
80. rnf13 ENSDARG00000019438 1560 1.65 0.747 - - - - - - 0.903 - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
81. fbl ENSDARG00000053912 5891 1.649 0.857 - - - 0.792 - - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
82. ints1 ENSDARG00000100419 1958 1.646 - 0.705 - - 0.941 - - - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
83. cx34.4 ENSDARG00000075854 168 1.646 - - - - - 0.784 0.862 - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
84. zgc:136474 zgc:136474 658 1.646 - - - 0.880 - - 0.766 - -
85. rapgef1a ENSDARG00000043593 416 1.643 - - - 0.787 - 0.856 - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
86. fstl3 ENSDARG00000025670 41 1.641 - - - - - 0.700 0.941 - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
87. foxo1a ENSDARG00000099555 288 1.64 0.842 - - - - - 0.798 - - forkhead box O1 a [Source:ZFIN;Acc:ZDB-GENE-061013-59]
88. tmem180 tmem180 430 1.638 0.915 - - - - - 0.723 - -
89. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.638 - - - - - - 0.805 0.833 - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
90. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.633 - - - - - 0.788 - 0.845 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
91. kif18a ENSDARG00000008022 546 1.633 - - - - - 0.761 0.872 - - kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
92. SIRT5 ENSDARG00000039684 1124 1.631 0.894 0.737 - - - - - - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
93. rorb ENSDARG00000033498 544 1.629 0.869 - - - - - 0.760 - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
94. FAM126B 588 1.628 - - - - - 0.761 0.867 - - family with sequence similarity 126 member B
95. e2f7 ENSDARG00000008986 1439 1.627 - - - - - - 0.773 0.854 - E2F transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-030131-3527]
96. si:dkey-22o22.2 ENSDARG00000102445 149 1.625 - - - - - 0.781 - 0.844 - si:dkey-22o22.2 [Source:ZFIN;Acc:ZDB-GENE-100922-84]
97. mnd1 ENSDARG00000074451 182 1.623 0.903 - - - - 0.720 - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
98. ORC2 ENSDARG00000101465 399 1.622 - 0.708 - - - - 0.914 - - origin recognition complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-061013-682]
99. kmt2bb ENSDARG00000060697 5230 1.622 - - - - 0.834 - - 0.788 - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
100. ppp4r2a ENSDARG00000026540 1782 1.622 0.871 - - - - 0.751 - - - protein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]

There are 2318 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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