Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for uspl1

Gene Name Gene ID Reads Annotation
uspl1 ENSDARG00000034825, ENSDARG00000109866 457 ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]










Genes with expression patterns similar to uspl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
2. NPBWR2 NPBWR2 132 1.878 - 0.930 - - - - 0.948 - -
3. ZBTB11 ENSDARG00000017886 817 1.869 - 0.942 - - - - 0.927 - - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
4. zgc:136254 ENSDARG00000068465 27 1.831 - 0.903 - - - - 0.928 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
5. MPPED1 ENSDARG00000088181 117 1.824 - 0.896 - - - - 0.928 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
6. c1qtnf3 c1qtnf3 387 1.814 - 0.894 - - - 0.920 - - -
7. rab9a ENSDARG00000045027 201 1.808 - - - - - 0.925 0.883 - - RAB9A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-293]
8. dennd1b ENSDARG00000101868 328 1.798 - - - - - 0.878 0.920 - - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
9. PDXK PDXK 224 1.784 - 0.871 - - - 0.913 - - -
10. zgc:175214 ENSDARG00000022891 1013 1.781 - - - - - 0.877 0.904 - - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
11. tmem53 ENSDARG00000038789 411 1.778 - - - - - 0.923 0.855 - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
12. ccnd2b ENSDARG00000070408 411 1.773 - - - - - 0.909 0.864 - - cyclin D2, b [Source:ZFIN;Acc:ZDB-GENE-050420-354]
13. elp5 ENSDARG00000067918 541 1.754 - - - - - 0.872 0.882 - - elongator acetyltransferase complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-061215-33]
14. tefb ENSDARG00000098103 370 1.747 - - - - - 0.904 0.843 - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
15. guk1a ENSDARG00000030340 517 1.746 - - - - - 0.878 0.868 - - guanylate kinase 1a [Source:ZFIN;Acc:ZDB-GENE-040625-130]
16. si:ch211-113p18.3 ENSDARG00000087835 377 1.738 - 0.853 - - - - 0.885 - - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
17. TOB2 TOB2 254 1.732 - 0.851 - - - 0.881 - - -
18. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.731 - - - - - 0.884 0.847 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
19. ppcs ENSDARG00000061889 224 1.729 - 0.808 - - - - 0.921 - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
20. cmasb 499 1.696 - - - - - 0.844 0.852 - - cytidine monophosphate N-acetylneuraminic acid synthetase b
21. ccnt2a ENSDARG00000036685 168 1.696 0.758 - - - - 0.938 - - - cyclin T2a [Source:ZFIN;Acc:ZDB-GENE-030131-5779]
22. FUZ ENSDARG00000079730 821 1.695 - - - - - 0.789 0.906 - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
23. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 1.694 - 0.919 - - - - 0.775 - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
24. stk16 ENSDARG00000037777 255 1.69 - 0.788 - - - - 0.902 - - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
25. xrcc1 ENSDARG00000009494 1346 1.684 - 0.777 - - - 0.907 - - - X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:ZFIN;Acc:ZDB-GENE-040822-30]
26. cdc20 ENSDARG00000100741 3264 1.683 - - - - - 0.934 0.749 - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
27. si:ch211-193k19.1 ENSDARG00000035660 636 1.681 - - - - - 0.904 0.777 - - si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
28. CR790368.1 ENSDARG00000100936 20 1.677 - - - 0.749 - - 0.928 - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
29. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 1.674 - - - - - 0.821 0.853 - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
30. rabac1 ENSDARG00000004171 2708 1.673 - - - - - 0.836 0.837 - - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
31. tctex1d2 ENSDARG00000054255 320 1.668 - - - 0.732 - - 0.936 - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
32. CIR1 ENSDARG00000099733 66 1.665 - - - 0.736 - 0.929 - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
33. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 1.664 - - - 0.730 - - 0.934 - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
34. grp ENSDARG00000043074 747 1.66 - - - - - 0.926 0.734 - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
35. ptgs2b ENSDARG00000010276 692 1.659 - - - - - 0.835 0.824 - - prostaglandin-endoperoxide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-041014-323]
36. si:dkey-176f19.6 si:dkey-176f19.6 373 1.656 - 0.731 - - - - 0.925 - -
37. AIM1L AIM1L 899 1.654 - - - - - 0.897 0.757 - -
38. nr1d2b ENSDARG00000009594 1144 1.648 - - - - - 0.891 0.757 - - nuclear receptor subfamily 1, group D, member 2b [Source:ZFIN;Acc:ZDB-GENE-990415-244]
39. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 1.641 - - - - - 0.924 0.717 - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
40. tmem50a ENSDARG00000015757 3244 1.641 - - - - - 0.758 0.883 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
41. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 1.632 - - - - - 0.748 0.884 - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]
42. vps36 ENSDARG00000057021 636 1.625 - 0.775 - - - 0.850 - - - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
43. magt1 ENSDARG00000058062 3903 1.621 - - - - - 0.850 0.771 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
44. tfcp2 ENSDARG00000060306 1024 1.619 - 0.793 - - - - 0.826 - - transcription factor CP2 [Source:ZFIN;Acc:ZDB-GENE-030131-2523]
45. gnai2b ENSDARG00000017294 686 1.616 - 0.907 - - - 0.709 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
46. si:dkeyp-104h9.5 ENSDARG00000073801 722 1.615 - - - - - 0.890 0.725 - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
47. nipa2 ENSDARG00000055912 1574 1.609 - - - - - 0.786 0.823 - - NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]
48. iqsec2 iqsec2 304 1.608 - 0.900 - - - - 0.708 - -
49. ap5s1 ENSDARG00000076755 318 1.599 - - - 0.726 - - 0.873 - - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
50. brd1b ENSDARG00000051798 1712 1.598 - - - - - 0.838 - - 0.760 bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
51. dchs1b ENSDARG00000079850 831 1.592 0.727 - - - - 0.865 - - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
52. samd13 ENSDARG00000062977 331 1.582 - 0.826 - - - - 0.756 - - sterile alpha motif domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060929-676]
53. KHDRBS3 ENSDARG00000101020 408 1.578 - 0.804 - 0.774 - - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
54. smg7 ENSDARG00000060767 2759 1.575 - - - - - 0.833 0.742 - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
55. pvrl1b 1645 1.574 - - - - - 0.853 0.721 - - poliovirus receptor-related 1b
56. coa5 ENSDARG00000094833 1988 1.572 - - - - - 0.862 0.710 - - cytochrome C oxidase assembly factor 5 [Source:ZFIN;Acc:ZDB-GENE-060825-53]
57. tuft1a ENSDARG00000061242, ENSDARG00000115368 330 1.567 - - - - - 0.857 0.710 - - tuftelin 1a [Source:ZFIN;Acc:ZDB-GENE-061103-184]
58. dusp7 ENSDARG00000101413 1307 1.566 - 0.802 - - - 0.764 - - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
59. tmem238 tmem238 1403 1.557 - - - - - 0.760 0.797 - -
60. tmem176l.3a ENSDARG00000098387 168 1.55 - 0.705 - - - - 0.845 - - transmembrane protein 176l.3a [Source:ZFIN;Acc:ZDB-GENE-080829-13]
61. CORIN ENSDARG00000101281 654 1.545 - - - 0.749 - 0.796 - - - corin, serine peptidase [Source:ZFIN;Acc:ZDB-GENE-060224-3]
62. myeov2 3351 1.54 - - - - - 0.812 0.728 - - myeloma overexpressed 2
63. safb ENSDARG00000020467 5608 1.531 - - - - - 0.809 - - 0.722 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
64. emc3 ENSDARG00000020607 3406 1.519 - - - - - 0.777 0.742 - - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
65. si:ch211-10a23.2 ENSDARG00000060656 471 1.519 - 0.817 - - - - - - 0.702 si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
66. PDGFC ENSDARG00000077588 1064 1.516 - 0.738 - - - - 0.778 - - platelet derived growth factor c [Source:ZFIN;Acc:ZDB-GENE-071217-2]
67. hmg20a ENSDARG00000031198 1763 1.513 - 0.787 - - - - - - 0.726 high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
68. mir203a 1519 1.511 - 0.805 - - - - 0.706 - - microRNA 203a
69. znf770 ENSDARG00000070786 796 1.51 - - - 0.792 - - 0.718 - - zinc finger protein 770 [Source:ZFIN;Acc:ZDB-GENE-030131-1505]
70. gpx7 ENSDARG00000091511 3045 1.509 - - - - - 0.785 0.724 - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
71. esyt3 ENSDARG00000006422 335 1.506 - 0.762 - - - - - 0.744 - extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
72. pank4 ENSDARG00000098453, ENSDARG00000114951 662 1.501 0.710 - - - - 0.791 - - - pantothenate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1592]
73. LPHN2 LPHN2 1971 1.499 - - - - - - 0.740 - 0.759
74. r3hdm1 ENSDARG00000101458 5241 1.496 - - - - - - 0.758 - 0.738 R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
75. sec23ip ENSDARG00000061413 804 1.485 - 0.704 - - - - 0.781 - - SEC23 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5259]
76. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 1.482 - - - - - 0.737 0.745 - - si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
77. adam17a ENSDARG00000043213 1305 1.477 - 0.767 - - - 0.710 - - - ADAM metallopeptidase domain 17a [Source:ZFIN;Acc:ZDB-GENE-030131-2862]
78. scamp5 scamp5 797 1.472 0.747 0.725 - - - - - - -
79. CCDC106 CCDC106 1908 1.472 - - - 0.729 - - 0.743 - -
80. ercc1 ENSDARG00000031680 900 1.464 - - - 0.716 - - 0.748 - - excision repair cross-complementation group 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2606]
81. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.462 - - - - - 0.717 0.745 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
82. rfx1b ENSDARG00000075904 1175 1.455 - - - - - 0.740 0.715 - - regulatory factor X, 1b (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-041008-101]
83. vps25 ENSDARG00000059079 3747 1.452 - - - - - 0.740 0.712 - - vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-30]
84. ptpn23a ENSDARG00000070124 1206 1.446 - - - - - 0.731 0.715 - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
85. sh2d3ca ENSDARG00000028099 1037 1.433 - - - 0.718 - - 0.715 - - SH2 domain containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080102-1]
86. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.417 0.715 - - - - 0.702 - - -
87. egfl6 ENSDARG00000045958 335 1.404 - 0.701 - - - - 0.703 - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
88. CABZ01067945.1 CABZ01067945.1 469 0.975 - - - - - 0.975 - - -
89. gsk3aa ENSDARG00000029501 957 0.97 - - - - - - 0.970 - - glycogen synthase kinase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-796]
90. chchd6a ENSDARG00000003206 421 0.968 - - - - - 0.968 - - - coiled-coil-helix-coiled-coil-helix domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-040930-2]
91. POLDIP3 ENSDARG00000099375 832 0.964 - - - - - - 0.964 - - polymerase (DNA-directed), delta interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-120201-2]
92. si:dkey-161j23.7 ENSDARG00000092882 180 0.963 - - - - - - 0.963 - - si:dkey-161j23.7 [Source:ZFIN;Acc:ZDB-GENE-091204-391]
93. macc1 ENSDARG00000040717 1669 0.963 - - - - - 0.963 - - - metastasis associated in colon cancer 1 [Source:ZFIN;Acc:ZDB-GENE-091006-3]
94. gripap1 ENSDARG00000063069 171 0.963 - - - - - - 0.963 - - GRIP1 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-922]
95. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 0.963 - - - - - 0.963 - - - ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
96. prdm4 ENSDARG00000017366 454 0.962 - - - - - 0.962 - - - PR domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-131]
97. si:rp71-1g18.1 ENSDARG00000053792, ENSDARG00000111192 437 0.959 - 0.959 - - - - - - - si:rp71-1g18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5470]
98. spsb3a ENSDARG00000077737 527 0.959 - - - - - - 0.959 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
99. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 0.959 - - - - - 0.959 - - - RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
100. CR847998.1 ENSDARG00000104784 518 0.958 - 0.958 - - - - - - -

There are 1830 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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