Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for usp8

Gene Name Gene ID Reads Annotation
usp8 ENSDARG00000063719 643 ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]










Genes with expression patterns similar to usp8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp8 ENSDARG00000063719 643 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
2. gpatch1 ENSDARG00000033418 1349 1.812 - - 0.989 - - - 0.823 - - G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040914-65]
3. LPHN2 LPHN2 1971 1.782 - - 0.973 - - 0.809 - - -
4. gbas gbas 735 1.779 - - 0.994 - - - - 0.785 -
5. rrbp1b ENSDARG00000041703, ENSDARG00000115474 4598 1.777 - - 0.922 - - 0.855 - - - ribosome binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030429-36]
6. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 1.756 - - 0.993 - - 0.763 - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
7. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.741 - - 0.966 - - 0.775 - - - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
8. C16H1orf172 C16H1orf172 909 1.736 - 0.756 0.980 - - - - - -
9. taldo1 ENSDARG00000103369 3804 1.735 - - 0.847 - - 0.888 - - - transaldolase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3277]
10. rab1bb ENSDARG00000056479, ENSDARG00000109723 551 1.729 - 0.851 - - - - - 0.878 - RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]
11. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 1.724 - - 0.989 - - - 0.735 - - peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
12. PGBD4_3 PGBD4_3 861 1.714 - - 0.990 - - 0.724 - - -
13. zgc:101583 ENSDARG00000026682, ENSDARG00000112271 971 1.712 - - - - - 0.801 - 0.911 - zgc:101583 [Source:ZFIN;Acc:ZDB-GENE-041212-75]
14. sash1a ENSDARG00000007179 2497 1.709 - - 0.967 - - - 0.742 - - SAM and SH3 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9960]
15. f2rl1.2 ENSDARG00000077540 822 1.705 - - 0.997 - - 0.708 - - - coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070615-24]
16. metap1 ENSDARG00000033440, ENSDARG00000110334 6569 1.7 - - 0.966 - - - 0.734 - - methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
17. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.694 - - 0.958 - - - 0.736 - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
18. wu:fc26g07 wu:fc26g07 1165 1.694 - - 0.991 - - - 0.703 - -
19. ubr1 ENSDARG00000060480 71 1.69 - 0.793 - - - - - 0.897 - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
20. ptpn13 ENSDARG00000103699 2866 1.665 - - 0.962 - - - 0.703 - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
21. ube2v1 ENSDARG00000041875 5739 1.637 - - 0.914 - - - 0.723 - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
22. hoxa11a ENSDARG00000104162 283 1.63 - 0.752 - - - - - 0.878 - homeobox A11a [Source:ZFIN;Acc:ZDB-GENE-000823-8]
23. ASPH ENSDARG00000055945 214 1.629 - - - - - 0.737 - 0.892 - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
24. als2b ENSDARG00000076924 738 1.626 - 0.861 - - - - - 0.765 - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
25. CR735107.2 CR735107.2 476 1.61 - 0.832 - - - 0.778 - - -
26. TSG101 TSG101 1686 1.608 - 0.723 - - - 0.885 - - -
27. si:dkey-211g8.5 ENSDARG00000092259 224 1.602 - - - - - 0.742 - 0.860 - si:dkey-211g8.5 [Source:ZFIN;Acc:ZDB-GENE-060503-718]
28. si:ch73-22o12.1 ENSDARG00000062831 251 1.584 0.814 0.770 - - - - - - - si:ch73-22o12.1 [Source:ZFIN;Acc:ZDB-GENE-110411-27]
29. wdr59 ENSDARG00000088817 1005 1.582 - 0.753 - - - - 0.829 - - WD repeat domain 59 [Source:ZFIN;Acc:ZDB-GENE-120215-187]
30. tmem206 ENSDARG00000012271 508 1.569 - - - - - 0.792 - 0.777 - transmembrane protein 206 [Source:ZFIN;Acc:ZDB-GENE-040426-1173]
31. mfsd5 ENSDARG00000015997 570 1.568 0.824 - - - - - 0.744 - - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
32. tspan13a ENSDARG00000068883 678 1.566 - 0.777 - - - 0.789 - - - tetraspanin 13a [Source:ZFIN;Acc:ZDB-GENE-040718-19]
33. vgll4b ENSDARG00000103730 5266 1.555 - - 0.710 - - 0.845 - - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
34. smim15 ENSDARG00000086699, ENSDARG00000114331 1945 1.552 - 0.820 - - - - - 0.732 - small integral membrane protein 15 [Source:ZFIN;Acc:ZDB-GENE-070410-48]
35. rgs19 ENSDARG00000077385 783 1.55 - - - - - 0.703 - 0.847 - regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
36. tacc1 ENSDARG00000073753 1127 1.541 - 0.733 - - - - 0.808 - - transforming, acidic coiled-coil containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-090521-5]
37. oser1 ENSDARG00000024669 676 1.535 - 0.706 - - - 0.829 - - - oxidative stress responsive serine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1325]
38. chkb ENSDARG00000063167 440 1.533 - 0.708 - - - - - 0.825 - choline kinase beta [Source:ZFIN;Acc:ZDB-GENE-030131-2928]
39. sb:cb252 sb:cb252 2480 1.53 - 0.707 0.823 - - - - - -
40. gng12a ENSDARG00000003375 1250 1.526 0.736 - - - - - - 0.790 - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
41. VAV2 ENSDARG00000044718, ENSDARG00000114652 422 1.521 - 0.720 - - - 0.801 - - - vav 2 guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-091204-420]
42. BX005175.1 ENSDARG00000112442 441 1.519 0.709 0.810 - - - - - - - protein kinase C, delta b [Source:NCBI gene;Acc:100150844]
43. vdac1 ENSDARG00000045132 8051 1.519 - - 0.791 - - - 0.728 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
44. sbds ENSDARG00000027803 846 1.515 - 0.725 - - - - 0.790 - - SBDS, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-040426-1116]
45. arcn1a ENSDARG00000002792 2847 1.496 - 0.775 0.721 - - - - - - archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
46. usp33 ENSDARG00000016163 651 1.492 - - - - - 0.792 0.700 - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
47. tnfsf10l ENSDARG00000004196, ENSDARG00000110725 1756 1.487 - - 0.708 - - - 0.779 - - TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]
48. trappc2 ENSDARG00000097660 760 1.479 - - - - - - 0.726 0.753 - trafficking protein particle complex 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1266]
49. pgm3 ENSDARG00000024654 366 1.479 - - - - - 0.715 0.764 - - phosphoglucomutase 3 [Source:ZFIN;Acc:ZDB-GENE-041024-13]
50. ECI2 ENSDARG00000102412 848 1.478 - - - - - 0.727 0.751 - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
51. rps6ka1 ENSDARG00000033437 366 1.464 - - - - - - 0.707 0.757 - ribosomal protein S6 kinase a, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060929-516]
52. cxcl-c5c cxcl-c5c 182 1.422 - 0.700 - - - 0.722 - - -
53. cpeb3 ENSDARG00000060103 2367 1.413 - 0.703 - - - - 0.710 - - cytoplasmic polyadenylation element binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-090312-68]
54. pycr1 pycr1 1258 0.997 - - 0.997 - - - - - -
55. utp6 ENSDARG00000098433, ENSDARG00000114878, ENSDARG00000116788 1262 0.996 - - 0.996 - - - - - - UTP6, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-769]
56. pkib ENSDARG00000053110 527 0.996 - - 0.996 - - - - - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
57. pld1b ENSDARG00000057125 325 0.996 - - 0.996 - - - - - - phospholipase D1b [Source:ZFIN;Acc:ZDB-GENE-070510-3]
58. U1_25 U1_25 283 0.996 - - 0.996 - - - - - -
59. gata1b ENSDARG00000059130 151 0.996 - - 0.996 - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
60. smad4 smad4 2519 0.996 - - 0.996 - - - - - -
61. mfsd4a mfsd4a 179 0.996 - - 0.996 - - - - - -
62. pank1b ENSDARG00000010098 3202 0.996 - - 0.996 - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
63. zgc:171673 ENSDARG00000102473 256 0.996 - - 0.996 - - - - - - zgc:171673 [Source:ZFIN;Acc:ZDB-GENE-071004-20]
64. lrp12 ENSDARG00000098845 999 0.996 - - 0.996 - - - - - - low density lipoprotein receptor-related protein 12 [Source:ZFIN;Acc:ZDB-GENE-060503-399]
65. vipas39 ENSDARG00000103690 280 0.996 - - 0.996 - - - - - - VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog [Source:ZFIN;Acc:ZDB-GENE-040520-1]
66. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.996 - - 0.996 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
67. zgc:113227 ENSDARG00000058874 266 0.995 - - 0.995 - - - - - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
68. PPP1R16B ENSDARG00000079860 390 0.995 - - 0.995 - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
69. MED8 ENSDARG00000114425 459 0.995 - - 0.995 - - - - - - mediator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2091]
70. cln6a ENSDARG00000077584 1090 0.995 - - 0.995 - - - - - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
71. nrg1 ENSDARG00000104314 1081 0.995 - - 0.995 - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
72. qki2 ENSDARG00000010018 2230 0.995 - - 0.995 - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
73. SNX19 SNX19 350 0.995 - - 0.995 - - - - - -
74. clybl ENSDARG00000029729 690 0.995 - - 0.995 - - - - - - citrate lyase beta like [Source:ZFIN;Acc:ZDB-GENE-030516-6]
75. sema3fa ENSDARG00000011163 759 0.995 - - 0.995 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
76. PATZ1 ENSDARG00000076584 1116 0.995 - - 0.995 - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
77. CU467832.1 CU467832.1 635 0.995 - - 0.995 - - - - - -
78. RAB39B RAB39B 482 0.995 - - 0.995 - - - - - -
79. dyrk1ab ENSDARG00000023814 1769 0.995 - - 0.995 - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
80. hemk1 ENSDARG00000078894 397 0.995 - - 0.995 - - - - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
81. fut8 fut8 652 0.994 - - 0.994 - - - - - -
82. CLIP4 ENSDARG00000096961 363 0.994 - - 0.994 - - - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
83. si:dkey-176f19.6 si:dkey-176f19.6 373 0.994 - - 0.994 - - - - - -
84. zgc:91860 ENSDARG00000041599, ENSDARG00000110489 669 0.994 - - 0.994 - - - - - - zgc:91860 [Source:ZFIN;Acc:ZDB-GENE-040704-34]
85. gins4 ENSDARG00000016044 671 0.994 - - 0.994 - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
86. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 0.994 - - 0.994 - - - - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
87. klhl15 ENSDARG00000001930 793 0.994 - - 0.994 - - - - - - kelch-like family member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-99]
88. DNAJC16 ENSDARG00000059699 507 0.994 - - 0.994 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
89. lipt1 ENSDARG00000025233 385 0.994 - - 0.994 - - - - - - lipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
90. mrpl22 ENSDARG00000109961 1374 0.993 - - 0.993 - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
91. orc1 ENSDARG00000039217, ENSDARG00000115400 795 0.993 - - 0.993 - - - - - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
92. phf12a ENSDARG00000074303 1025 0.993 - - 0.993 - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
93. inip ENSDARG00000028523 1925 0.993 - - 0.993 - - - - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
94. fignl1 ENSDARG00000016427 636 0.993 - - 0.993 - - - - - - fidgetin-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1862]
95. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 0.992 - - 0.992 - - - - - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
96. wdhd1 ENSDARG00000015998 775 0.992 - - 0.992 - - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
97. pdzrn3b ENSDARG00000073869 1566 0.992 - - 0.992 - - - - - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
98. znf410 ENSDARG00000008218 1807 0.992 - - 0.992 - - - - - - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
99. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.992 - - 0.992 - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
100. slain2 ENSDARG00000032114 798 0.992 - - 0.992 - - - - - - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]

There are 1374 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA