Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp7

Gene Name Gene ID Reads Annotation
usp7 ENSDARG00000073710 7017 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]










Genes with expression patterns similar to usp7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp7 ENSDARG00000073710 7017 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
2. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 3.163 - - 0.782 0.781 - 0.812 0.788 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
3. tmpob ENSDARG00000022978 8121 3.126 - - 0.779 - - 0.741 - 0.849 0.757 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
4. sf1 ENSDARG00000008188 5142 3.068 - - 0.754 0.734 - - 0.808 - 0.772 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
5. hnrnpub ENSDARG00000004735 16496 2.988 0.731 - - 0.728 - 0.724 - - 0.805 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
6. hmgb2b ENSDARG00000053990 11519 2.536 - - - - 0.902 - 0.805 - 0.829 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
7. sumo3a ENSDARG00000028119 13447 2.41 - - - - 0.842 - 0.801 - 0.767 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
8. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.41 - - - 0.793 - - 0.725 0.892 - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
9. CR936437.1 CR936437.1 6465 2.374 - 0.809 0.800 - - - - - 0.765
10. ezh2 ENSDARG00000010571 3273 2.364 0.729 - - - - - 0.811 - 0.824 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
11. TAF15 ENSDARG00000070019 5102 2.362 - - 0.709 - - - 0.822 - 0.831 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
12. psma1 ENSDARG00000101560 5390 2.346 0.734 0.905 - - - - 0.707 - - proteasome subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-040801-15]
13. bcl11ab ENSDARG00000063153 3032 2.34 - - - 0.709 - - 0.840 - 0.791 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
14. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.336 - - - 0.720 - 0.804 0.812 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
15. rbb4 rbb4 15541 2.333 - - - - - 0.769 0.813 - 0.751
16. lypla2 ENSDARG00000053656 8971 2.317 - - - - - 0.762 0.789 - 0.766 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
17. dpf2l ENSDARG00000037291, ENSDARG00000112198 2353 2.299 - - 0.720 - - - - 0.840 0.739 D4, zinc and double PHD fingers family 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-5132]
18. arhgap1 ENSDARG00000024324 6904 2.299 - - - - - 0.735 - 0.824 0.740 Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
19. smc1al ENSDARG00000058203 8838 2.292 - - 0.752 - - - 0.778 - 0.762 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
20. ep300b ENSDARG00000061108 5173 2.289 - - 0.742 - - - 0.700 0.847 - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
21. srrm1 ENSDARG00000001244 4972 2.288 - - 0.796 - - - 0.736 0.756 - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
22. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 2.284 - - - - 0.742 - 0.800 0.742 - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
23. snrpd3l ENSDARG00000076283 7655 2.273 - - - - - 0.767 0.758 - 0.748 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
24. si:ch73-46j18.5 ENSDARG00000092467 6002 2.271 - - 0.755 - - 0.768 0.748 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
25. ipo7 ENSDARG00000035751 7095 2.268 - - - 0.700 0.783 - - 0.785 - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
26. HNRNPAB HNRNPAB 22267 2.265 - - - - - - 0.793 0.741 0.731
27. parp1 ENSDARG00000019529 6787 2.265 0.720 - 0.762 - - - - - 0.783 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
28. puf60a ENSDARG00000032175 5618 2.264 - - - - - 0.707 0.778 - 0.779 poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
29. HIPK1_1 HIPK1_1 8096 2.246 - - - - - 0.727 0.742 - 0.777
30. ylpm1 ENSDARG00000043680 7676 2.243 - - 0.787 0.731 - - 0.725 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
31. PWWP2A ENSDARG00000075526 2163 2.216 - - 0.721 - - 0.703 - - 0.792 PWWP domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-131120-4]
32. sox2 ENSDARG00000070913 2763 2.211 - - 0.714 0.700 - - - 0.797 - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
33. pds5b ENSDARG00000098897 1732 2.206 - - 0.704 - 0.725 - 0.777 - - PDS5 cohesin associated factor B [Source:ZFIN;Acc:ZDB-GENE-091217-2]
34. smek1 ENSDARG00000042187 3509 2.197 - - - - 0.716 - 0.714 - 0.767 SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:ZFIN;Acc:ZDB-GENE-030131-3958]
35. smg7 ENSDARG00000060767 2759 2.195 - - - - - 0.702 0.732 - 0.761 SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
36. hnrpl 6412 2.184 - - 0.702 - - - 0.709 - 0.773 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
37. tle2 5014 2.18 - - - 0.735 - 0.720 0.725 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
38. mta2 ENSDARG00000013031 2932 2.141 - - 0.703 0.731 - - 0.707 - - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
39. KIF4A KIF4A 3322 2.137 - - 0.707 - 0.722 - 0.708 - -
40. srcap ENSDARG00000005236 1740 2.119 - - - - 0.715 - 0.702 - 0.702 Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
41. h2afy2_1 ENSDARG00000087897 9887 1.849 - 0.997 - - - - 0.852 - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
42. mrpl11 ENSDARG00000013075 2927 1.811 - 0.999 - - - - - 0.812 - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
43. FP085405.1 FP085405.1 5189 1.805 - 0.961 - - - - 0.844 - -
44. nhp2 ENSDARG00000069422 9925 1.774 - - - - 0.958 - 0.816 - - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
45. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.754 - 0.999 - - - - - - 0.755 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
46. sltm ENSDARG00000052728 6234 1.751 - - - - - 0.867 0.884 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
47. ube2i2 ube2i2 4828 1.722 - 0.997 - - - - 0.725 - -
48. nfyba ENSDARG00000039185 1804 1.7 - 0.998 - - 0.702 - - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
49. abce1 ENSDARG00000007216 7502 1.678 - 0.962 - - - - 0.716 - - ATP-binding cassette, sub-family E (OABP), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1995]
50. akirin2 ENSDARG00000058729 13245 1.672 - - - - 0.855 - 0.817 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
51. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 1.663 - - - - - - 0.912 - 0.751 ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
52. HIST1H4C HIST1H4C 6190 1.659 - 0.952 - - - - - - 0.707
53. TNRC6A ENSDARG00000079688 14433 1.657 - - 0.783 - - - 0.874 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
54. siah1 ENSDARG00000030871 1590 1.654 - - - - - 0.820 - 0.834 - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
55. nucks1a ENSDARG00000078473 28285 1.652 - - 0.827 - 0.825 - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
56. gna11b ENSDARG00000053326 5118 1.648 - - - - - - 0.858 - 0.790 guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
57. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.642 - - - - - - 0.806 - 0.836 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
58. HNRNPA2B1 HNRNPA2B1 14997 1.642 - - - 0.781 - - 0.861 - -
59. khsrp ENSDARG00000026489 15738 1.636 - - - - - - 0.822 0.814 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
60. safb ENSDARG00000020467 5608 1.633 - - - - - 0.791 - - 0.842 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
61. rbm4.1 ENSDARG00000036386 625 1.632 - - - - - - - 0.854 0.778 RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
62. nhlh2 ENSDARG00000025495 1860 1.631 - - - - - - - 0.894 0.737 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
63. CREBZF ENSDARG00000089787 4261 1.625 - - - - - - - 0.823 0.802 CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
64. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.623 - - - - - - 0.816 - 0.807 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
65. CYTH2 ENSDARG00000028800 2349 1.618 - - - - - - - 0.811 0.807 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
66. cwc22 ENSDARG00000014008 2385 1.616 - - - - 0.726 - - 0.890 - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
67. TNKS TNKS 2775 1.614 - - - - - - 0.806 - 0.808
68. kif11 ENSDARG00000010948 4973 1.614 - - - - - - - 0.876 0.738 kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
69. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.614 - - - - - - 0.862 - 0.752 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
70. carm1 ENSDARG00000018698 5599 1.61 - - - - - - 0.769 0.841 - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
71. srsf6a ENSDARG00000013729 8576 1.609 - 0.810 - - - - 0.799 - - serine/arginine-rich splicing factor 6a [Source:ZFIN;Acc:ZDB-GENE-040426-2824]
72. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.607 - - - - - - - 0.828 0.779 actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
73. snrpc ENSDARG00000009871 9567 1.604 - - - - - - 0.806 - 0.798 small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
74. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.602 - - 0.747 - - - 0.855 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
75. TNRC6C_2 TNRC6C_2 2444 1.602 - - 0.788 - - - - 0.814 -
76. eif4h ENSDARG00000042252 6742 1.6 - - - - - - - 0.809 0.791 eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
77. ppp2r1a ppp2r1a 11291 1.598 - - - - - - 0.853 0.745 -
78. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 1.596 0.747 0.849 - - - - - - - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
79. GIGYF1_1 GIGYF1_1 1865 1.596 - - - - - - 0.870 - 0.726
80. top1l ENSDARG00000070545 40529 1.594 - - - 0.773 - - 0.821 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
81. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.591 - - - - 0.861 - - - 0.730 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
82. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.582 - - - - - - 0.768 - 0.814 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
83. bnip3la ENSDARG00000025468 3097 1.582 - - - - - - 0.704 0.878 - BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
84. RSF1_2 RSF1_2 1343 1.58 - - - - - - - 0.827 0.753
85. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.58 0.759 - - - - - - - 0.821 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
86. CORO1C CORO1C 5554 1.576 0.715 - - - - - - 0.861 -
87. psmb6 ENSDARG00000002240 8015 1.575 - - - - - - - 0.782 0.793 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
88. tet3 ENSDARG00000062646 6672 1.575 - - - - - - 0.825 0.750 - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
89. fam76b ENSDARG00000012432 2722 1.574 - - - - - - - 0.832 0.742 family with sequence similarity 76, member B [Source:ZFIN;Acc:ZDB-GENE-030131-6955]
90. pacsin1b ENSDARG00000042128 1051 1.568 - - - - - - - 0.784 0.784 protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
91. lhx1a ENSDARG00000014018 958 1.567 - - - - - - - 0.852 0.715 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
92. ssbp4 ENSDARG00000056483 10196 1.567 0.732 - - - - - 0.835 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
93. h2afva ENSDARG00000068820 16427 1.567 - 0.750 - - - - 0.817 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
94. ZNF70_2 ZNF70_2 1866 1.567 - - - 0.715 - - - 0.852 -
95. anp32a ENSDARG00000006487 28249 1.564 - - - - - 0.764 0.800 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
96. u2af1 ENSDARG00000015325 3217 1.56 - - - - - - 0.771 - 0.789 U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
97. dla ENSDARG00000010791 9281 1.558 - - - - - - - 0.784 0.774 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
98. lsm14aa ENSDARG00000006600 2298 1.558 - - - - - 0.719 0.839 - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
99. Sep-06 Sep-06 5465 1.557 - - - - - - 0.826 - 0.731
100. BX004812.1 ENSDARG00000096968 5467 1.555 - 0.833 - - - - - 0.722 -

There are 1309 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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