Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp53b

Gene Name Gene ID Reads Annotation
usp53b ENSDARG00000076499 16 ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]










Genes with expression patterns similar to usp53b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp53b ENSDARG00000076499 16 6 1.000 - 1.000 1.000 - - 1.000 1.000 1.000 ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
2. tusc3 ENSDARG00000078854 4 2 - - - 1.000 - - 1.000 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
3. BX572077.3 BX572077.3 20 2 - - - 1.000 - - 1.000 - -
4. si:dkey-57b6.4 si:dkey-57b6.4 3 2 - - - 1.000 - - 1.000 - -
5. PLCG2 ENSDARG00000068763 11 2 - - - 1.000 - - 1.000 - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
6. si:ch211-229l10.10 si:ch211-229l10.10 8 1.78 - - 0.780 1.000 - - - - -
7. twsg1b 7 1.728 0.728 - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
8. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1.728 0.728 - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
9. wu:fb63c12 26 1.675 0.728 - 0.947 - - - - - - wu:fb63c12
10. CDKN2B CDKN2B 5 1.637 0.728 - 0.909 - - - - - -
11. nts ENSDARG00000057887 5 1 - - - 1.000 - - - - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
12. CUZD1_2 CUZD1_2 1 1 - - - 1.000 - - - - -
13. CU695006.1 CU695006.1 4 1 - - - - - - 1.000 - -
14. zgc:194189 ENSDARG00000008010 26 1 - - - - - - 1.000 - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
15. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 - - - - - - 1.000 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
16. sorl1 ENSDARG00000013892 13 1 - - - 1.000 - - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
17. IMPG2 IMPG2 1 1 - - - 1.000 - - - - -
18. asb2a_1 asb2a_1 6 1 - - - - - - 1.000 - -
19. scarb2 scarb2 0 1 - - - 1.000 - - - - -
20. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - 1.000 - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
21. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - 1.000 - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
22. CT025887.1 ENSDARG00000114574 1 1 - - - - - - 1.000 - - uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
23. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - - 1.000 - -
24. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - - - - - - 1.000 - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
25. setd1bb ENSDARG00000077244 34 1 - - - - - - 1.000 - - SET domain containing 1B, b [Source:ZFIN;Acc:ZDB-GENE-080522-1]
26. tnni2a.1 ENSDARG00000045592 15 1 - - - - - - 1.000 - - troponin I type 2a (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-60]
27. BRSK2_2 BRSK2_2 3 1 - - - 1.000 - - - - -
28. MFAP4_3 MFAP4_3 7 1 - - - - - - 1.000 - -
29. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - - 1.000 - - - - -
30. gper gper 4 1 - - - 1.000 - - - - -
31. chrna9 ENSDARG00000054680 4 1 - - - - - - 1.000 - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
32. KAZN_1 KAZN_1 13 1 - - - - - - 1.000 - -
33. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - 1.000 - - - - -
34. RNH1_2 RNH1_2 12 1 - - - - - - 1.000 - -
35. si:ch211-106h4.12 ENSDARG00000092920 6 1 - - - 1.000 - - - - - si:ch211-106h4.12 [Source:ZFIN;Acc:ZDB-GENE-070705-12]
36. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - - - 1.000 - - - - -
37. tbx4 ENSDARG00000030058, ENSDARG00000113067 5 1 - - - 1.000 - - - - - T-box 4 [Source:ZFIN;Acc:ZDB-GENE-991124-5]
38. si:ch73-266f23.3 ENSDARG00000096120 1 1 - - - 1.000 - - - - - si:ch73-266f23.3 [Source:ZFIN;Acc:ZDB-GENE-110914-182]
39. SLC16A7 ENSDARG00000098258 4 1 - - - 1.000 - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
40. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - 1.000 - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
41. VGLL2 VGLL2 13 1 - - - - - - 1.000 - -
42. XCR1 XCR1 9 1 - - - - - - 1.000 - -
43. BX323819.1 BX323819.1 9 1 - - - - - - 1.000 - -
44. EXT1_1 EXT1_1 3 1 - - - 1.000 - - - - -
45. cd4 cd4 4 1 - - - 1.000 - - - - -
46. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - - - 1.000 - - - - -
47. GLS2 GLS2 10 1 - - - - - - 1.000 - -
48. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - 1.000 - - - - -
49. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - 1.000 - - - - - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
50. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - 1.000 - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
51. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - 1.000 - - - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
52. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - 1.000 - - - - -
53. KSR1 KSR1 8 1 - - - - - - 1.000 - -
54. snx33 ENSDARG00000014954 45 1 - - - - - - 1.000 - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
55. CU570791.1 ENSDARG00000098597 4 1 - - - 1.000 - - - - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
56. thnsl2 ENSDARG00000032584 59 1 - - - - - - 1.000 - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
57. CR848025.1 ENSDARG00000100501 35 1 - - - 1.000 - - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
58. CR769782.1 CR769782.1 8 1 - - - 1.000 - - - - -
59. MFAP4 ENSDARG00000090783 8 1 - - - 1.000 - - - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
60. itga2b ENSDARG00000018687 0 1 - - - 1.000 - - - - - integrin, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-051031-1]
61. neurod2 ENSDARG00000016854 6 1 - - - 1.000 - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
62. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 1 - - - - - - 1.000 - - moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
63. tmem117 ENSDARG00000088356 0 1 - - - 1.000 - - - - - transmembrane protein 117 [Source:ZFIN;Acc:ZDB-GENE-040426-2809]
64. zgc:173713 17 1 - - - 1.000 - - - - - zgc:173713, transcript variant X2
65. loxhd1b ENSDARG00000074638 6 1 - - - 1.000 - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
66. ppp4r1 ENSDARG00000101316 1 1 - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
67. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - 1.000 - - - - - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
68. casp3b ENSDARG00000055045 54 1 - - - - - - 1.000 - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
69. zgc:195077 ENSDARG00000070852 1 1 - - - - - - 1.000 - - zgc:195077 [Source:ZFIN;Acc:ZDB-GENE-080724-9]
70. adck4 7 1 - - - 1.000 - - - - - aarF domain containing kinase 4, transcript variant X2
71. FJX1 ENSDARG00000035873 22 1 - - - - - - 1.000 - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
72. ZNF337_11 ZNF337_11 11 1 - - - 1.000 - - - - -
73. si:dkey-201i6.6 si:dkey-201i6.6 2 1 - - - - - - 1.000 - -
74. RECK ENSDARG00000090039 15 1 - - - - - - 1.000 - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
75. C4H12orf39 C4H12orf39 73 1 - - - - - - 1.000 - -
76. zgc:153116 ENSDARG00000077205 7 1 - - - 1.000 - - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
77. pmch ENSDARG00000073959 1 1 - - - 1.000 - - - - - pro-melanin-concentrating hormone [Source:ZFIN;Acc:ZDB-GENE-041210-150]
78. SLC22A23_2 SLC22A23_2 0 1 - - - 1.000 - - - - -
79. si:ch211-250n8.1 ENSDARG00000088736 4 1 - - - - - - 1.000 - - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
80. socs1a ENSDARG00000038095 20 1 - - - - - - 1.000 - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
81. si:dkey-1j5.4 ENSDARG00000073747 1 1 - - - - - - 1.000 - - si:dkey-1j5.4 [Source:ZFIN;Acc:ZDB-GENE-130603-91]
82. TXNRD2 TXNRD2 14 1 - - - - - - 1.000 - -
83. cmlc1 ENSDARG00000032976 455 1 - - - - - - 1.000 - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
84. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - - - 1.000 - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
85. ca10b ENSDARG00000009568 8 1 - - - 1.000 - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
86. fam151a ENSDARG00000058218 40 1 - - - - - - 1.000 - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
87. BCAM ENSDARG00000090190 19 1 - - - - - - 1.000 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
88. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - - 1.000 - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
89. myd88 ENSDARG00000010169 86 1 - - - - - - 1.000 - - myeloid differentiation primary response 88 [Source:ZFIN;Acc:ZDB-GENE-040219-3]
90. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - 1.000 - - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
91. mhc1zaa ENSDARG00000092162 2 1 - - - 1.000 - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
92. armc2 ENSDARG00000022660 3 1 - - - 1.000 - - - - - armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
93. si:ch211-262n1.5 12 1 - - - 1.000 - - - - - si:ch211-262n1.5
94. si:dkey-149m13.5 ENSDARG00000094653 1 1 - - - 1.000 - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
95. he1b 11900 1 - - - - - - 1.000 - - hatching enzyme 1b
96. ACTN4 ENSDARG00000099786 25 1 - - - - - - 1.000 - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
97. th2 ENSDARG00000038384 1 1 - - - 1.000 - - - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
98. gpr155a ENSDARG00000090804 27 1 - - - - - - 1.000 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
99. ydjc ENSDARG00000062655 5 1 - - - 1.000 - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
100. lrrc38 lrrc38 20 1 - - - - - - 1.000 - -

There are 412 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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