Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for usp53b

Gene Name Gene ID Reads Annotation
usp53b ENSDARG00000076499 16 ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]










Genes with expression patterns similar to usp53b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp53b ENSDARG00000076499 16 6 1.000 - 1.000 1.000 - - 1.000 1.000 1.000 ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
2. si:dkey-57b6.4 si:dkey-57b6.4 3 2 - - - 1.000 - - 1.000 - -
3. PLCG2 ENSDARG00000068763 11 2 - - - 1.000 - - 1.000 - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
4. BX572077.3 BX572077.3 20 2 - - - 1.000 - - 1.000 - -
5. tusc3 ENSDARG00000078854 4 2 - - - 1.000 - - 1.000 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
6. si:ch211-229l10.10 si:ch211-229l10.10 8 1.78 - - 0.780 1.000 - - - - -
7. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1.728 0.728 - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
8. twsg1b 7 1.728 0.728 - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
9. wu:fb63c12 26 1.675 0.728 - 0.947 - - - - - - wu:fb63c12
10. CDKN2B CDKN2B 5 1.637 0.728 - 0.909 - - - - - -
11. CUZD1_2 CUZD1_2 1 1 - - - 1.000 - - - - -
12. si:dkey-201i6.6 si:dkey-201i6.6 2 1 - - - - - - 1.000 - -
13. RNH1_2 RNH1_2 12 1 - - - - - - 1.000 - -
14. U5 U5 0 1 - - - 1.000 - - - - -
15. si:dkey-149m13.5 ENSDARG00000094653 1 1 - - - 1.000 - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
16. nts ENSDARG00000057887 5 1 - - - 1.000 - - - - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
17. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - 1.000 - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
18. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - - 1.000 - -
19. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - 1.000 - - - - -
20. XCR1 XCR1 9 1 - - - - - - 1.000 - -
21. MAMDC4 MAMDC4 3 1 - - - 1.000 - - - - -
22. CT027682.3 CT027682.3 0 1 - - - - - - 1.000 - -
23. atp2b1b ENSDARG00000007788 56 1 - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
24. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - - - 1.000 - -
25. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - 1.000 - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
26. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - - - 1.000 - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
27. EP400 ENSDARG00000100965 45 1 - - - 1.000 - - - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
28. PLA2G10 PLA2G10 9 1 - - - - - - 1.000 - -
29. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - 1.000 - - - - -
30. si:ch211-250n8.1 ENSDARG00000088736 4 1 - - - - - - 1.000 - - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
31. cacng5a ENSDARG00000003326 17 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
32. ccbe1 ENSDARG00000086158 0 1 - - - 1.000 - - - - - collagen and calcium binding EGF domains 1 [Source:ZFIN;Acc:ZDB-GENE-090506-7]
33. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - 1.000 - - - - -
34. AL954173.3 AL954173.3 1 1 - - - 1.000 - - - - -
35. glis1b ENSDARG00000027933 14 1 - - - 1.000 - - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
36. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - 1.000 - - - - -
37. myd88 ENSDARG00000010169 86 1 - - - - - - 1.000 - - myeloid differentiation primary response 88 [Source:ZFIN;Acc:ZDB-GENE-040219-3]
38. cd4 cd4 4 1 - - - 1.000 - - - - -
39. CR769782.1 CR769782.1 8 1 - - - 1.000 - - - - -
40. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1 - - - - - - 1.000 - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
41. MXRA5 MXRA5 58 1 - - - - - - 1.000 - -
42. CR762484.2 CR762484.2 42 1 - - - - - - 1.000 - -
43. itga2b ENSDARG00000018687 0 1 - - - 1.000 - - - - - integrin, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-051031-1]
44. SLC22A23_2 SLC22A23_2 0 1 - - - 1.000 - - - - -
45. CT025887.1 ENSDARG00000114574 1 1 - - - - - - 1.000 - - uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
46. lrmp ENSDARG00000045574 26 1 - - - - - - 1.000 - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
47. cog6 ENSDARG00000103149 39 1 - - - 1.000 - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
48. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - 1.000 - - - - -
49. KLHDC3 ENSDARG00000102772 14 1 - - - - - - 1.000 - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
50. BX548011.3 ENSDARG00000113526 2 1 - - - 1.000 - - - - -
51. neurod2 ENSDARG00000016854 6 1 - - - 1.000 - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
52. si:dkey-148d16.5 ENSDARG00000096782 0 1 - - - 1.000 - - - - - si:dkey-148d16.5 [Source:ZFIN;Acc:ZDB-GENE-130603-77]
53. GPR97_1 GPR97_1 2 1 - - - - - - 1.000 - -
54. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - - 1.000 - -
55. si:dkey-183p4.10 ENSDARG00000077907 5 1 - - - 1.000 - - - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
56. CU570791.1 ENSDARG00000098597 4 1 - - - 1.000 - - - - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
57. BX511065.1 BX511065.1 214 1 - - - - - - 1.000 - -
58. tbx4 ENSDARG00000030058, ENSDARG00000113067 5 1 - - - 1.000 - - - - - T-box 4 [Source:ZFIN;Acc:ZDB-GENE-991124-5]
59. ca10b ENSDARG00000009568 8 1 - - - 1.000 - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
60. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - - - 1.000 - - - - -
61. ENDOD1_1 ENDOD1_1 0 1 - - - - - - 1.000 - -
62. ampd2 ampd2 6 1 - - - 1.000 - - - - -
63. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 1 - - - 1.000 - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
64. ncs1b ENSDARG00000054186 252 1 - - - - - - 1.000 - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
65. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - - 1.000 - -
66. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - - 1.000 - - - - -
67. UBAC2_1 UBAC2_1 23 1 - - - - - - 1.000 - -
68. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - - - 1.000 - - - - -
69. si:dkey-11d20.4 si:dkey-11d20.4 6 1 - - - - - - 1.000 - -
70. adck4 7 1 - - - 1.000 - - - - - aarF domain containing kinase 4, transcript variant X2
71. VGLL2 VGLL2 13 1 - - - - - - 1.000 - -
72. si:ch73-299h12.1_1 ENSDARG00000102321 8 1 - - - 1.000 - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
73. PEG3_31 PEG3_31 6 1 - - - 1.000 - - - - -
74. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - 1.000 - - - - -
75. si:ch211-106h4.12 ENSDARG00000092920 6 1 - - - 1.000 - - - - - si:ch211-106h4.12 [Source:ZFIN;Acc:ZDB-GENE-070705-12]
76. gpr75 ENSDARG00000098526 32 1 - - - - - - 1.000 - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
77. flnb ENSDARG00000092281 10 1 - - - - - - 1.000 - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
78. KSR1 KSR1 8 1 - - - - - - 1.000 - -
79. kcnab1 kcnab1 10 1 - - - - - - 1.000 - -
80. KAZN_1 KAZN_1 13 1 - - - - - - 1.000 - -
81. GLS2 GLS2 10 1 - - - - - - 1.000 - -
82. si:dkey-279j5.1 ENSDARG00000101459 17 1 - - - - - - 1.000 - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
83. casp3b ENSDARG00000055045 54 1 - - - - - - 1.000 - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
84. BX323819.1 BX323819.1 9 1 - - - - - - 1.000 - -
85. trim35-29 ENSDARG00000055730 24 1 - - - - - - 1.000 - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
86. arl11l arl11l 31 1 - - - 1.000 - - - - -
87. pvalb5 ENSDARG00000032836 242 1 - - - - - - 1.000 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
88. scarb2 scarb2 0 1 - - - 1.000 - - - - -
89. ydjc ENSDARG00000062655 5 1 - - - 1.000 - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
90. ascl1b ENSDARG00000009702, ENSDARG00000101628 1 1 - - - 1.000 - - - - - achaete-scute family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-980526-174]
91. thnsl2 ENSDARG00000032584 59 1 - - - - - - 1.000 - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
92. setd1bb ENSDARG00000077244 34 1 - - - - - - 1.000 - - SET domain containing 1B, b [Source:ZFIN;Acc:ZDB-GENE-080522-1]
93. TRIM14_10 TRIM14_10 9 1 - - - - - - 1.000 - -
94. lrrc38 lrrc38 20 1 - - - - - - 1.000 - -
95. radil ENSDARG00000079779 14 1 - - - - - - 1.000 - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
96. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - 1.000 - - - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
97. CABZ01025394.1 CABZ01025394.1 1 1 - - - 1.000 - - - - -
98. armc2 ENSDARG00000022660 3 1 - - - 1.000 - - - - - armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
99. si:dkey-22h13.2 ENSDARG00000112725 3 1 - - - 1.000 - - - - - si:dkey-22h13.2 [Source:ZFIN;Acc:ZDB-GENE-120703-42]
100. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - - 1.000 - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]

There are 412 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA