Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp53b

Gene Name Gene ID Reads Annotation
usp53b ENSDARG00000076499 16 ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]










Genes with expression patterns similar to usp53b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp53b ENSDARG00000076499 16 6 1.000 - 1.000 1.000 - - 1.000 1.000 1.000 ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
2. tusc3 ENSDARG00000078854 4 2 - - - 1.000 - - 1.000 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
3. PLCG2 ENSDARG00000068763 11 2 - - - 1.000 - - 1.000 - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
4. BX572077.3 BX572077.3 20 2 - - - 1.000 - - 1.000 - -
5. si:dkey-57b6.4 si:dkey-57b6.4 3 2 - - - 1.000 - - 1.000 - -
6. si:ch211-229l10.10 si:ch211-229l10.10 8 1.78 - - 0.780 1.000 - - - - -
7. twsg1b 7 1.728 0.728 - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
8. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1.728 0.728 - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
9. wu:fb63c12 26 1.675 0.728 - 0.947 - - - - - - wu:fb63c12
10. CDKN2B CDKN2B 5 1.637 0.728 - 0.909 - - - - - -
11. armc2 ENSDARG00000022660 3 1 - - - 1.000 - - - - - armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
12. he1b 11900 1 - - - - - - 1.000 - - hatching enzyme 1b
13. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - - - 1.000 - - - - -
14. pvalb5 ENSDARG00000032836 242 1 - - - - - - 1.000 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
15. BX548011.3 ENSDARG00000113526 2 1 - - - 1.000 - - - - -
16. si:ch211-262n1.5 12 1 - - - 1.000 - - - - - si:ch211-262n1.5
17. lrrc38 lrrc38 20 1 - - - - - - 1.000 - -
18. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - 1.000 - - - - -
19. akap1a ENSDARG00000089802 5 1 - - - - - - 1.000 - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
20. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - 1.000 - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
21. SLC22A23_2 SLC22A23_2 0 1 - - - 1.000 - - - - -
22. MXRA5 MXRA5 58 1 - - - - - - 1.000 - -
23. BRSK2_2 BRSK2_2 3 1 - - - 1.000 - - - - -
24. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - 1.000 - - - - -
25. BTBD17_1 BTBD17_1 42 1 - - - - - - 1.000 - -
26. ppp4r1 ENSDARG00000101316 1 1 - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
27. tmem117 ENSDARG00000088356 0 1 - - - 1.000 - - - - - transmembrane protein 117 [Source:ZFIN;Acc:ZDB-GENE-040426-2809]
28. si:ch211-250o15.5 si:ch211-250o15.5 1 1 - - - - - - 1.000 - -
29. PLA2G10 PLA2G10 9 1 - - - - - - 1.000 - -
30. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - - - - - - 1.000 - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
31. mhc1zaa ENSDARG00000092162 2 1 - - - 1.000 - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
32. CU681840.1 CU681840.1 3 1 - - - - - - 1.000 - -
33. si:dkey-228c11.4 si:dkey-228c11.4 5 1 - - - 1.000 - - - - -
34. ydjc ENSDARG00000062655 5 1 - - - 1.000 - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
35. zgc:194189 ENSDARG00000008010 26 1 - - - - - - 1.000 - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
36. ncs1b ENSDARG00000054186 252 1 - - - - - - 1.000 - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
37. mfsd10 ENSDARG00000086786 304 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
38. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
39. BCAM ENSDARG00000090190 19 1 - - - - - - 1.000 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
40. ZNF337_11 ZNF337_11 11 1 - - - 1.000 - - - - -
41. nfixa ENSDARG00000043226 14 1 - - - 1.000 - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
42. si:dkey-183p4.10 ENSDARG00000077907 5 1 - - - 1.000 - - - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
43. SNORD35_1 SNORD35_1 0 1 - - - 1.000 - - - - -
44. KSR1 KSR1 8 1 - - - - - - 1.000 - -
45. CT583625.1 ENSDARG00000093788 10 1 - - - 1.000 - - - - -
46. ACTN4 ENSDARG00000099786 25 1 - - - - - - 1.000 - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
47. trim35-29 ENSDARG00000055730 24 1 - - - - - - 1.000 - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
48. or115-1 ENSDARG00000018521 1 1 - - - 1.000 - - - - - odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
49. NPC1L1 ENSDARG00000099558 0 1 - - - - - - 1.000 - - NPC1 like intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7898]
50. ampd2 ampd2 6 1 - - - 1.000 - - - - -
51. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - 1.000 - - - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
52. U5 U5 0 1 - - - 1.000 - - - - -
53. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - - 1.000 - -
54. CABZ01025394.1 CABZ01025394.1 1 1 - - - 1.000 - - - - -
55. BX323819.1 BX323819.1 9 1 - - - - - - 1.000 - -
56. chrm2a ENSDARG00000098612 5 1 - - - 1.000 - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
57. casp3b ENSDARG00000055045 54 1 - - - - - - 1.000 - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
58. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 1 - - - - - - 1.000 - - moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
59. zgc:173716 9 1 - - - - - - 1.000 - - zgc:173716
60. cmlc1 ENSDARG00000032976 455 1 - - - - - - 1.000 - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
61. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - 1.000 - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
62. zgc:173713 17 1 - - - 1.000 - - - - - zgc:173713, transcript variant X2
63. si:ch73-266f23.3 ENSDARG00000096120 1 1 - - - 1.000 - - - - - si:ch73-266f23.3 [Source:ZFIN;Acc:ZDB-GENE-110914-182]
64. si:ch211-133l5.8 ENSDARG00000027676 23 1 - - - 1.000 - - - - - si:ch211-133l5.8 [Source:ZFIN;Acc:ZDB-GENE-081104-118]
65. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - 1.000 - - - - - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
66. HIST1H4H HIST1H4H 26 1 - - - 1.000 - - - - -
67. MFAP4 ENSDARG00000090783 8 1 - - - 1.000 - - - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
68. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - - - 1.000 - -
69. cd4 cd4 4 1 - - - 1.000 - - - - -
70. st3gal1l ENSDARG00000079310 10 1 - - - - - - 1.000 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
71. ponzr6 ENSDARG00000036382 16 1 - - - - - - 1.000 - - plac8 onzin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-081104-326]
72. ccbe1 ENSDARG00000086158 0 1 - - - 1.000 - - - - - collagen and calcium binding EGF domains 1 [Source:ZFIN;Acc:ZDB-GENE-090506-7]
73. adck4 7 1 - - - 1.000 - - - - - aarF domain containing kinase 4, transcript variant X2
74. CR848025.1 ENSDARG00000100501 35 1 - - - 1.000 - - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
75. ENDOD1_1 ENDOD1_1 0 1 - - - - - - 1.000 - -
76. lmod2b ENSDARG00000045864 63 1 - - - - - - 1.000 - - leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
77. glis1b ENSDARG00000027933 14 1 - - - 1.000 - - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
78. VGLL2 VGLL2 13 1 - - - - - - 1.000 - -
79. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 1 - - - - - - 1.000 - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
80. ebf1b ENSDARG00000069196 64 1 - - - - - - 1.000 - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
81. CR762484.2 CR762484.2 42 1 - - - - - - 1.000 - -
82. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - 1.000 - - - - -
83. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1 - - - - - - 1.000 - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
84. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - 1.000 - - - - -
85. loxhd1b ENSDARG00000074638 6 1 - - - 1.000 - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
86. CABZ01073069.1 CABZ01073069.1 5 1 - - - 1.000 - - - - -
87. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - - - 1.000 - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
88. itga2b ENSDARG00000018687 0 1 - - - 1.000 - - - - - integrin, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-051031-1]
89. BX511065.1 BX511065.1 214 1 - - - - - - 1.000 - -
90. qkib ENSDARG00000002026 15 1 - - - - - - 1.000 - - QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]
91. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - 1.000 - - - - -
92. TRIM14_12 TRIM14_12 1 1 - - - - - - 1.000 - -
93. zgc:195077 ENSDARG00000070852 1 1 - - - - - - 1.000 - - zgc:195077 [Source:ZFIN;Acc:ZDB-GENE-080724-9]
94. si:dkey-148d16.5 ENSDARG00000096782 0 1 - - - 1.000 - - - - - si:dkey-148d16.5 [Source:ZFIN;Acc:ZDB-GENE-130603-77]
95. gltpb ENSDARG00000077962 5 1 - - - 1.000 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
96. cog6 ENSDARG00000103149 39 1 - - - 1.000 - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
97. nts ENSDARG00000057887 5 1 - - - 1.000 - - - - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
98. ROCK2 ROCK2 8 1 - - - - - - 1.000 - -
99. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - - 1.000 - - - - -
100. ascl1b ENSDARG00000009702, ENSDARG00000101628 1 1 - - - 1.000 - - - - - achaete-scute family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-980526-174]

There are 412 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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