Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for usp53b

Gene Name Gene ID Reads Annotation
usp53b ENSDARG00000076499 16 ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]










Genes with expression patterns similar to usp53b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp53b ENSDARG00000076499 16 6 1.000 - 1.000 1.000 - - 1.000 1.000 1.000 ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
2. si:dkey-57b6.4 si:dkey-57b6.4 3 2 - - - 1.000 - - 1.000 - -
3. BX572077.3 BX572077.3 20 2 - - - 1.000 - - 1.000 - -
4. PLCG2 ENSDARG00000068763 11 2 - - - 1.000 - - 1.000 - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
5. tusc3 ENSDARG00000078854 4 2 - - - 1.000 - - 1.000 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
6. si:ch211-229l10.10 si:ch211-229l10.10 8 1.78 - - 0.780 1.000 - - - - -
7. twsg1b 7 1.728 0.728 - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
8. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1.728 0.728 - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
9. wu:fb63c12 26 1.675 0.728 - 0.947 - - - - - - wu:fb63c12
10. CDKN2B CDKN2B 5 1.637 0.728 - 0.909 - - - - - -
11. PEG3_31 PEG3_31 6 1 - - - 1.000 - - - - -
12. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - 1.000 - - - - -
13. mhc1zaa ENSDARG00000092162 2 1 - - - 1.000 - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
14. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 - - - - - - 1.000 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
15. si:dkey-201i6.6 si:dkey-201i6.6 2 1 - - - - - - 1.000 - -
16. TRIM14_10 TRIM14_10 9 1 - - - - - - 1.000 - -
17. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - - - 1.000 - -
18. si:dkey-228c11.4 si:dkey-228c11.4 5 1 - - - 1.000 - - - - -
19. ydjc ENSDARG00000062655 5 1 - - - 1.000 - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
20. CABZ01073069.1 CABZ01073069.1 5 1 - - - 1.000 - - - - -
21. csrp1b ENSDARG00000030980 2 1 - - - 1.000 - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
22. gpr75 ENSDARG00000098526 32 1 - - - - - - 1.000 - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
23. si:ch73-299h12.1_1 ENSDARG00000102321 8 1 - - - 1.000 - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
24. cacng5a ENSDARG00000003326 17 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
25. aste1 5 1 - - - - - - 1.000 - - asteroid homolog 1 (Drosophila)
26. CMTM8 CMTM8 71 1 - - - - - - 1.000 - -
27. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - 1.000 - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
28. MAMDC4 MAMDC4 3 1 - - - 1.000 - - - - -
29. ACTN4 ENSDARG00000099786 25 1 - - - - - - 1.000 - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
30. trim35-29 ENSDARG00000055730 24 1 - - - - - - 1.000 - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
31. armc2 ENSDARG00000022660 3 1 - - - 1.000 - - - - - armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
32. U5 U5 0 1 - - - 1.000 - - - - -
33. si:dkey-183p4.10 ENSDARG00000077907 5 1 - - - 1.000 - - - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
34. xrra1 ENSDARG00000089578 18 1 - - - 1.000 - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
35. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - 1.000 - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
36. FJX1 ENSDARG00000035873 22 1 - - - - - - 1.000 - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
37. sorl1 ENSDARG00000013892 13 1 - - - 1.000 - - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
38. akap1a ENSDARG00000089802 5 1 - - - - - - 1.000 - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
39. CT025887.1 ENSDARG00000114574 1 1 - - - - - - 1.000 - - uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
40. socs1a ENSDARG00000038095 20 1 - - - - - - 1.000 - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
41. WIPF1 WIPF1 32 1 - - - - - - 1.000 - -
42. zgc:153116 ENSDARG00000077205 7 1 - - - 1.000 - - - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
43. lrmp ENSDARG00000045574 26 1 - - - - - - 1.000 - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
44. SNORD35_1 SNORD35_1 0 1 - - - 1.000 - - - - -
45. CR848025.1 ENSDARG00000100501 35 1 - - - 1.000 - - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
46. MFAP4 ENSDARG00000090783 8 1 - - - 1.000 - - - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
47. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - - - 1.000 - - - - -
48. casp3b ENSDARG00000055045 54 1 - - - - - - 1.000 - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
49. KSR1 KSR1 8 1 - - - - - - 1.000 - -
50. HIST1H4H HIST1H4H 26 1 - - - 1.000 - - - - -
51. ca10b ENSDARG00000009568 8 1 - - - 1.000 - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
52. C4H12orf39 C4H12orf39 73 1 - - - - - - 1.000 - -
53. XCR1 XCR1 9 1 - - - - - - 1.000 - -
54. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - 1.000 - - - - -
55. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - 1.000 - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
56. CU695006.1 CU695006.1 4 1 - - - - - - 1.000 - -
57. arl11l arl11l 31 1 - - - 1.000 - - - - -
58. atp2b1b ENSDARG00000007788 56 1 - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
59. CU570791.1 ENSDARG00000098597 4 1 - - - 1.000 - - - - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
60. radil ENSDARG00000079779 14 1 - - - - - - 1.000 - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
61. KAZN_1 KAZN_1 13 1 - - - - - - 1.000 - -
62. lmod2b ENSDARG00000045864 63 1 - - - - - - 1.000 - - leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
63. thnsl2 ENSDARG00000032584 59 1 - - - - - - 1.000 - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
64. scarb2 scarb2 0 1 - - - 1.000 - - - - -
65. gper gper 4 1 - - - 1.000 - - - - -
66. mfsd10 ENSDARG00000086786 304 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
67. si:dkey-149m13.5 ENSDARG00000094653 1 1 - - - 1.000 - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
68. si:dkey-279j5.1 ENSDARG00000101459 17 1 - - - - - - 1.000 - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
69. si:ch211-119o8.8 si:ch211-119o8.8 0 1 - - - 1.000 - - - - -
70. CU183952.2 CU183952.2 6 1 - - - 1.000 - - - - -
71. loxhd1b ENSDARG00000074638 6 1 - - - 1.000 - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
72. si:ch211-203l7.3 si:ch211-203l7.3 0 1 - - - - - - 1.000 - -
73. tbx4 ENSDARG00000030058, ENSDARG00000113067 5 1 - - - 1.000 - - - - - T-box 4 [Source:ZFIN;Acc:ZDB-GENE-991124-5]
74. klhl24 klhl24 40 1 - - - - - - 1.000 - -
75. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - 1.000 - - - - -
76. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - - - 1.000 - - - - -
77. cyp1c2 ENSDARG00000101789 3 1 - - - - - - 1.000 - - cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1]
78. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 1 - - - - - - 1.000 - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
79. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - 1.000 - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
80. GRIK2 ENSDARG00000113771 3 1 - - - 1.000 - - - - - glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]
81. ttc6 ENSDARG00000104125 7 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
82. CR762484.2 CR762484.2 42 1 - - - - - - 1.000 - -
83. BCAM ENSDARG00000090190 19 1 - - - - - - 1.000 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
84. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - 1.000 - - - - - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
85. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - 1.000 - - - - -
86. MXRA5 MXRA5 58 1 - - - - - - 1.000 - -
87. CU467646.3 ENSDARG00000099076 36 1 - - - - - - 1.000 - - mucin-2-like [Source:NCBI gene;Acc:108179180]
88. kcnj1a.2 ENSDARG00000090866 8 1 - - - - - - 1.000 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
89. PLA2G10 PLA2G10 9 1 - - - - - - 1.000 - -
90. ncs1b ENSDARG00000054186 252 1 - - - - - - 1.000 - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
91. asb2a_1 asb2a_1 6 1 - - - - - - 1.000 - -
92. cmlc1 ENSDARG00000032976 455 1 - - - - - - 1.000 - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
93. EP400 ENSDARG00000100965 45 1 - - - 1.000 - - - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
94. GLS2 GLS2 10 1 - - - - - - 1.000 - -
95. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - 1.000 - - - - -
96. ponzr6 ENSDARG00000036382 16 1 - - - - - - 1.000 - - plac8 onzin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-081104-326]
97. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - 1.000 - - - - -
98. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - - 1.000 - -
99. VGLL2 VGLL2 13 1 - - - - - - 1.000 - -
100. th2 ENSDARG00000038384 1 1 - - - 1.000 - - - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]

There are 412 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA