Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp53b

Gene Name Gene ID Reads Annotation
usp53b ENSDARG00000076499 16 ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]










Genes with expression patterns similar to usp53b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp53b ENSDARG00000076499 16 6 1.000 - 1.000 1.000 - - 1.000 1.000 1.000 ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
2. PLCG2 ENSDARG00000068763 11 2 - - - 1.000 - - 1.000 - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
3. BX572077.3 BX572077.3 20 2 - - - 1.000 - - 1.000 - -
4. tusc3 ENSDARG00000078854 4 2 - - - 1.000 - - 1.000 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
5. si:dkey-57b6.4 si:dkey-57b6.4 3 2 - - - 1.000 - - 1.000 - -
6. si:ch211-229l10.10 si:ch211-229l10.10 8 1.78 - - 0.780 1.000 - - - - -
7. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1.728 0.728 - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
8. twsg1b 7 1.728 0.728 - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
9. wu:fb63c12 26 1.675 0.728 - 0.947 - - - - - - wu:fb63c12
10. CDKN2B CDKN2B 5 1.637 0.728 - 0.909 - - - - - -
11. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - - - 1.000 - -
12. trim35-29 ENSDARG00000055730 24 1 - - - - - - 1.000 - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
13. kcnj1a.2 ENSDARG00000090866 8 1 - - - - - - 1.000 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
14. SNORD35_1 SNORD35_1 0 1 - - - 1.000 - - - - -
15. BX323819.1 BX323819.1 9 1 - - - - - - 1.000 - -
16. RNH1 ENSDARG00000086631 0 1 - - - 1.000 - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
17. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - 1.000 - - - - -
18. PEG3_31 PEG3_31 6 1 - - - 1.000 - - - - -
19. ncs1b ENSDARG00000054186 252 1 - - - - - - 1.000 - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
20. nfixa ENSDARG00000043226 14 1 - - - 1.000 - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
21. MFAP4_3 MFAP4_3 7 1 - - - - - - 1.000 - -
22. MXRA5 MXRA5 58 1 - - - - - - 1.000 - -
23. si:dkey-25o1.2 si:dkey-25o1.2 86 1 - - - 1.000 - - - - -
24. flnb ENSDARG00000092281 10 1 - - - - - - 1.000 - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
25. si:ch73-299h12.1_1 ENSDARG00000102321 8 1 - - - 1.000 - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
26. SLC22A23_2 SLC22A23_2 0 1 - - - 1.000 - - - - -
27. CU570791.1 ENSDARG00000098597 4 1 - - - 1.000 - - - - - NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
28. setd1bb ENSDARG00000077244 34 1 - - - - - - 1.000 - - SET domain containing 1B, b [Source:ZFIN;Acc:ZDB-GENE-080522-1]
29. si:dkey-265c15.5 si:dkey-265c15.5 1 1 - - - 1.000 - - - - -
30. SNORA26 SNORA26 1 1 - - - - - - 1.000 - -
31. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - 1.000 - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
32. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - 1.000 - - - - -
33. NPC1L1 ENSDARG00000099558 0 1 - - - - - - 1.000 - - NPC1 like intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7898]
34. si:ch211-208f21.1 si:ch211-208f21.1 1 1 - - - 1.000 - - - - -
35. RECK ENSDARG00000090039 15 1 - - - - - - 1.000 - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
36. klhl24 klhl24 40 1 - - - - - - 1.000 - -
37. BX323854.1 ENSDARG00000030778 3 1 - - - - - - 1.000 - -
38. MAMDC4 MAMDC4 3 1 - - - 1.000 - - - - -
39. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - 1.000 - - - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
40. ebf1b ENSDARG00000069196 64 1 - - - - - - 1.000 - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
41. TXNRD2 TXNRD2 14 1 - - - - - - 1.000 - -
42. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 - - - - - - 1.000 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
43. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - 1.000 - - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
44. si:dkey-148d16.5 ENSDARG00000096782 0 1 - - - 1.000 - - - - - si:dkey-148d16.5 [Source:ZFIN;Acc:ZDB-GENE-130603-77]
45. CABZ01073069.1 CABZ01073069.1 5 1 - - - 1.000 - - - - -
46. CT583625.1 ENSDARG00000093788 10 1 - - - 1.000 - - - - -
47. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - - 1.000 - -
48. SLC16A7 ENSDARG00000098258 4 1 - - - 1.000 - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
49. si:dkey-201i6.6 si:dkey-201i6.6 2 1 - - - - - - 1.000 - -
50. CR769782.1 CR769782.1 8 1 - - - 1.000 - - - - -
51. cog6 ENSDARG00000103149 39 1 - - - 1.000 - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
52. ppp4r1 ENSDARG00000101316 1 1 - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
53. si:ch211-203l7.3 si:ch211-203l7.3 0 1 - - - - - - 1.000 - -
54. C4H12orf39 C4H12orf39 73 1 - - - - - - 1.000 - -
55. WIPF1 WIPF1 32 1 - - - - - - 1.000 - -
56. KAZN_1 KAZN_1 13 1 - - - - - - 1.000 - -
57. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
58. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1 - - - - - - 1.000 - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
59. HIST1H4H HIST1H4H 26 1 - - - 1.000 - - - - -
60. casp3b ENSDARG00000055045 54 1 - - - - - - 1.000 - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
61. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - 1.000 - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
62. ampd2 ampd2 6 1 - - - 1.000 - - - - -
63. ACTN4 ENSDARG00000099786 25 1 - - - - - - 1.000 - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
64. MFAP4 ENSDARG00000090783 8 1 - - - 1.000 - - - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
65. si:dkey-149m13.5 ENSDARG00000094653 1 1 - - - 1.000 - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
66. TRIM14_12 TRIM14_12 1 1 - - - - - - 1.000 - -
67. dio2 ENSDARG00000094857 17 1 - - - 1.000 - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
68. mhc1zaa ENSDARG00000092162 2 1 - - - 1.000 - - - - - major histocompatibility complex class I ZAA [Source:ZFIN;Acc:ZDB-GENE-030916-1]
69. si:dkey-9a20.8 si:dkey-9a20.8 8 1 - - - 1.000 - - - - -
70. thnsl2 ENSDARG00000032584 59 1 - - - - - - 1.000 - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
71. CT025887.1 ENSDARG00000114574 1 1 - - - - - - 1.000 - - uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
72. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - 1.000 - - - - -
73. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - 1.000 - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
74. CU694952.2 CU694952.2 3 1 - - - 1.000 - - - - -
75. CU183952.2 CU183952.2 6 1 - - - 1.000 - - - - -
76. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - 1.000 - - - - -
77. CU467646.3 ENSDARG00000099076 36 1 - - - - - - 1.000 - - mucin-2-like [Source:NCBI gene;Acc:108179180]
78. ttc6 ENSDARG00000104125 7 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
79. armc2 ENSDARG00000022660 3 1 - - - 1.000 - - - - - armadillo repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-7]
80. tmem117 ENSDARG00000088356 0 1 - - - 1.000 - - - - - transmembrane protein 117 [Source:ZFIN;Acc:ZDB-GENE-040426-2809]
81. cyp1c2 ENSDARG00000101789 3 1 - - - - - - 1.000 - - cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1]
82. arl11l arl11l 31 1 - - - 1.000 - - - - -
83. si:ch211-106h4.12 ENSDARG00000092920 6 1 - - - 1.000 - - - - - si:ch211-106h4.12 [Source:ZFIN;Acc:ZDB-GENE-070705-12]
84. EGFR_1 EGFR_1 2 1 - - - - - - 1.000 - -
85. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - 1.000 - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
86. alg13 ENSDARG00000054374 2 1 - - - - - - 1.000 - - ALG13, UDP-N-acetylglucosaminyltransferase subunit [Source:ZFIN;Acc:ZDB-GENE-060307-1]
87. cmlc1 ENSDARG00000032976 455 1 - - - - - - 1.000 - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
88. si:dkey-183p4.10 ENSDARG00000077907 5 1 - - - 1.000 - - - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
89. gpr75 ENSDARG00000098526 32 1 - - - - - - 1.000 - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
90. ftr09 ENSDARG00000095345 0 1 - - - 1.000 - - - - - finTRIM family, member 9 [Source:ZFIN;Acc:ZDB-GENE-070912-223]
91. KSR1 KSR1 8 1 - - - - - - 1.000 - -
92. si:ch211-250n8.1 ENSDARG00000088736 4 1 - - - - - - 1.000 - - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
93. xrra1 ENSDARG00000089578 18 1 - - - 1.000 - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
94. fam151a ENSDARG00000058218 40 1 - - - - - - 1.000 - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
95. CR848025.1 ENSDARG00000100501 35 1 - - - 1.000 - - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
96. zgc:173716 9 1 - - - - - - 1.000 - - zgc:173716
97. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1 - - - 1.000 - - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
98. snx33 ENSDARG00000014954 45 1 - - - - - - 1.000 - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
99. XCR1 XCR1 9 1 - - - - - - 1.000 - -
100. zgc:154142 ENSDARG00000100792 42 1 - - - - - - 1.000 - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]

There are 412 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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