Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for usp48

Gene Name Gene ID Reads Annotation
usp48 ENSDARG00000090301 1396 ubiquitin specific peptidase 48 [Source:ZFIN;Acc:ZDB-GENE-050522-197]










Genes with expression patterns similar to usp48

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp48 ENSDARG00000090301 1396 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 48 [Source:ZFIN;Acc:ZDB-GENE-050522-197]
2. hdac8 ENSDARG00000003021, ENSDARG00000105159 1729 2.312 - - - - - 0.754 0.739 0.819 - histone deacetylase 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2772]
3. jarid2b ENSDARG00000062268 2206 2.292 - - - 0.781 - - 0.808 - 0.703 jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
4. si:ch211-288g17.3 ENSDARG00000070959 2425 1.703 - - - - - - 0.790 0.913 - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
5. si:dkeyp-113d7.1 ENSDARG00000059109 2145 1.636 - - - - - - 0.777 0.859 - si:dkeyp-113d7.1 [Source:ZFIN;Acc:ZDB-GENE-030131-755]
6. epha7 ENSDARG00000004635, ENSDARG00000112305 1373 1.618 - - - - - - 0.756 0.862 - eph receptor A7 [Source:ZFIN;Acc:ZDB-GENE-030131-3745]
7. drg2 ENSDARG00000006642 1167 1.611 - - - - - - 0.727 0.884 - developmentally regulated GTP binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040808-29]
8. st8sia2 ENSDARG00000018788 2183 1.596 - - - - - - 0.750 0.846 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
9. hcfc1b ENSDARG00000012519 3633 1.561 - - - - - - 0.727 0.834 - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
10. socs6b ENSDARG00000015863 1799 1.56 - - - 0.759 - - - 0.801 - suppressor of cytokine signaling 6b [Source:ZFIN;Acc:ZDB-GENE-030131-1670]
11. SSBP4 ENSDARG00000056483 5156 1.55 - - - - - - 0.708 0.842 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
12. ppp1cc 2361 1.549 - - - - - 0.770 - 0.779 - protein phosphatase 1, catalytic subunit, gamma isozyme
13. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.536 - - - - - - 0.807 - 0.729 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
14. rbm25 rbm25 3629 1.528 - - - - - - 0.805 - 0.723
15. znf292b ENSDARG00000043973 3791 1.523 - - - - - 0.728 0.795 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
16. ezh2 ENSDARG00000010571 3273 1.518 - - - - - 0.786 - - 0.732 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
17. grm4 ENSDARG00000040156 342 1.516 - 0.765 - - - - 0.751 - - glutamate receptor, metabotropic 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5781]
18. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.511 - - - - - 0.708 0.803 - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
19. calm1a ENSDARG00000021811 4791 1.501 - - - - - - 0.778 0.723 - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
20. atad5a ENSDARG00000070568 1840 1.49 - - - - - 0.778 - - 0.712 ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
21. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.49 - - - - - - 0.765 - 0.725 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
22. hnrnpub ENSDARG00000004735 16496 1.485 - - - - - - 0.757 - 0.728 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
23. HNRNPA2B1 HNRNPA2B1 14997 1.481 - - - 0.725 - - 0.756 - -
24. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.481 - - - - - - 0.763 - 0.718 si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
25. marcksa ENSDARG00000004049 2518 1.48 - - - - - - 0.751 - 0.729 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
26. FGFBP3 FGFBP3 993 1.476 - - - 0.703 - - - 0.773 -
27. CDKN1C CDKN1C 667 1.469 - 0.731 - - - - 0.738 - -
28. fyna ENSDARG00000011370 1679 1.467 - - - 0.747 - - 0.720 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
29. nrarpb ENSDARG00000018958 6225 1.46 - - - - - - 0.752 - 0.708 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
30. sf1 ENSDARG00000008188 5142 1.448 - - - 0.747 - - - - 0.701 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
31. sestd1 ENSDARG00000040614 1014 1.435 - - - - - 0.711 0.724 - - SEC14 and spectrin domains 1 [Source:ZFIN;Acc:ZDB-GENE-030801-1]
32. smarcd1 ENSDARG00000019004 6028 1.43 - - - 0.713 - - 0.717 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
33. wu:fq41a10 wu:fq41a10 7009 1.423 - - - 0.702 - - 0.721 - -
34. dpysl5a ENSDARG00000011141 1827 1.423 - - - - - - 0.723 - 0.700 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
35. PHYHIP ENSDARG00000116497 456 1.42 - 0.706 - - - - 0.714 - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
36. reep2 ENSDARG00000031382, ENSDARG00000112622 563 0.942 - - - - - - - 0.942 - receptor accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-125]
37. ankhd1 ENSDARG00000077860 5510 0.916 - - - - - - - 0.916 - ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
38. PARP14 PARP14 164 0.906 - - - - - - - 0.906 -
39. hcst ENSDARG00000092074 172 0.906 - - - - - - - 0.906 - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
40. smyd5 ENSDARG00000071669 1194 0.905 - - - - - - - 0.905 - SMYD family member 5 [Source:ZFIN;Acc:ZDB-GENE-040912-39]
41. zgc:113019 ENSDARG00000099743 994 0.905 - - - - - - - 0.905 - zgc:113019 [Source:ZFIN;Acc:ZDB-GENE-050417-449]
42. hsd17b4 ENSDARG00000101239 301 0.905 - - - - - - - 0.905 - hydroxysteroid (17-beta) dehydrogenase 4 [Source:ZFIN;Acc:ZDB-GENE-040421-1]
43. CABZ01073405.1 CABZ01073405.1 275 0.905 - - - - - - - 0.905 -
44. si:dkeyp-59c12.1 ENSDARG00000038112 186 0.905 - - - - - - - 0.905 - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
45. slc6a11a ENSDARG00000074002 189 0.905 - - - - - - - 0.905 - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
46. ftr23 ENSDARG00000067985 254 0.904 - - - - - - - 0.904 - finTRIM family, member 23 [Source:ZFIN;Acc:ZDB-GENE-070912-322]
47. golga4 ENSDARG00000075331 447 0.904 - - - - - - - 0.904 - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
48. cxxc1l cxxc1l 1035 0.904 - - - - - - - 0.904 -
49. si:dkey-38p12.2 si:dkey-38p12.2 504 0.903 - - - - - - - 0.903 -
50. pir ENSDARG00000056638 722 0.903 - - - - - - - 0.903 - pirin [Source:ZFIN;Acc:ZDB-GENE-040718-288]
51. C6H1orf159 C6H1orf159 406 0.903 - - - - - - - 0.903 -
52. rdh12 ENSDARG00000018069 396 0.903 - - - - - - - 0.903 - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
53. si:dkey-238o14.5 si:dkey-238o14.5 450 0.903 - - - - - - - 0.903 -
54. si:dkey-3h3.3 ENSDARG00000067718 225 0.903 - - - - - - - 0.903 - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
55. TAF4 TAF4 658 0.903 - - - - - - - 0.903 -
56. wscd2 ENSDARG00000061819 304 0.903 - - - - - - - 0.903 - WSC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-124]
57. RIN3 ENSDARG00000077618 745 0.902 - - - - - - - 0.902 - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
58. srebf2 ENSDARG00000063438 1982 0.902 - - - - - - - 0.902 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
59. prelid1b ENSDARG00000044169 501 0.902 - - - - - - - 0.902 - PRELI domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-169]
60. si:dkey-204f11.64 ENSDARG00000094695 586 0.902 - - - - - - - 0.902 - si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
61. kmt2d ENSDARG00000037060 1232 0.902 - - - - - - - 0.902 - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
62. C17H15orf57 C17H15orf57 1366 0.901 - - - - - - - 0.901 -
63. GGT7 ENSDARG00000115805 481 0.901 - - - - - - - 0.901 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
64. MAN2A2 ENSDARG00000063101 922 0.901 - - - - - - - 0.901 - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
65. agk ENSDARG00000009837, ENSDARG00000113514 811 0.901 - - - - - - - 0.901 - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
66. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.901 - - - - - - - 0.901 - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
67. KIF4A KIF4A 3322 0.9 - - - - - - - 0.900 -
68. slc30a9 ENSDARG00000057272 766 0.9 - - - - - - - 0.900 - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
69. TUBGCP6 1991 0.899 - - - - - - - 0.899 - tubulin, gamma complex associated protein 6
70. ufsp2 ENSDARG00000056369, ENSDARG00000115753 998 0.899 - - - - - - - 0.899 - ufm1-specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8726]
71. ncapd3 ENSDARG00000034773, ENSDARG00000111405 823 0.898 - - - - - - - 0.898 - non-SMC condensin II complex, subunit D3 [Source:ZFIN;Acc:ZDB-GENE-040426-737]
72. tfe3b ENSDARG00000019457, ENSDARG00000111231 507 0.898 - - - - - - - 0.898 - transcription factor binding to IGHM enhancer 3b [Source:ZFIN;Acc:ZDB-GENE-010919-3]
73. USP6 USP6 613 0.898 - - - - - - - 0.898 -
74. cnp ENSDARG00000070822 649 0.898 - - - - - - - 0.898 - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
75. slc7a6os ENSDARG00000010596 1599 0.898 - - - - - - - 0.898 - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
76. paxip1 ENSDARG00000005606 1417 0.898 - - - - - - - 0.898 - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
77. nptx1l ENSDARG00000074671 569 0.897 - - - - - - - 0.897 - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
78. myo9b ENSDARG00000077410 1956 0.897 - - - - - - - 0.897 - myosin IXb [Source:ZFIN;Acc:ZDB-GENE-030131-938]
79. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 0.896 - - - - - - - 0.896 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
80. zgc:113443 359 0.895 - - - - - - - 0.895 - zgc:113443, transcript variant X3
81. araf ENSDARG00000054533 1132 0.895 - - - - - - - 0.895 - A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
82. fam96b 2255 0.895 - - - - - - - 0.895 - family with sequence similarity 96, member B
83. exoc7 ENSDARG00000087229 987 0.894 - - - - - - - 0.894 - exocyst complex component 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2752]
84. IGSF3 ENSDARG00000077002, ENSDARG00000115203 564 0.894 - - - - - - - 0.894 - immunoglobulin superfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-243]
85. agtr1b ENSDARG00000045443 232 0.893 - - - - - - - 0.893 - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
86. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.893 - - - - - - - 0.893 - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
87. anxa5b ENSDARG00000016470 2934 0.893 - - - - - - - 0.893 - annexin A5b [Source:ZFIN;Acc:ZDB-GENE-030131-9076]
88. WDR77 2463 0.893 - - - - - - - 0.893 - WD repeat domain 77
89. RNF145 RNF145 1364 0.893 - - - - - - - 0.893 -
90. vps4b ENSDARG00000069175 1922 0.893 - - - - - - - 0.893 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
91. lamp1 1017 0.892 - - - - - - - 0.892 - lysosomal-associated membrane protein 1
92. gpr146 ENSDARG00000059610 810 0.892 - - - - - - - 0.892 - G protein-coupled receptor 146 [Source:ZFIN;Acc:ZDB-GENE-050823-3]
93. epc1 epc1 1164 0.891 - - - - - - - 0.891 -
94. sly1 sly1 2403 0.891 - - - - - - - 0.891 -
95. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 0.891 - - - - - - - 0.891 - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
96. LRP10 ENSDARG00000054539 1895 0.89 - - - - - - - 0.890 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
97. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 0.889 - - - - - - - 0.889 - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
98. PHLPP1 ENSDARG00000078694 2466 0.888 - - - - - - - 0.888 - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
99. si:dkey-193b15.6 si:dkey-193b15.6 1340 0.888 - - - - - - - 0.888 -
100. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 0.887 - - - - - - - 0.887 - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]

There are 987 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA