Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp47

Gene Name Gene ID Reads Annotation
usp47 ENSDARG00000102645 16 ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]










Genes with expression patterns similar to usp47

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp47 ENSDARG00000102645 16 6 1.000 1.000 1.000 - 1.000 - - 1.000 1.000 ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
2. BX000999.2 BX000999.2 2353 2.799 1.000 0.799 - - - - - 1.000 -
3. znf804b ENSDARG00000103396 11 2.504 - 0.799 0.882 - - - - - 0.823 zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
4. bckdhb ENSDARG00000014676 17 1.979 1.000 0.979 - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
5. si:ch73-155e10.1 si:ch73-155e10.1 13 1.831 1.000 - 0.831 - - - - - -
6. si:dkey-51d8.6 ENSDARG00000090769 17 1.799 1.000 0.799 - - - - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
7. scn1a 8 1.799 1.000 0.799 - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
8. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.799 1.000 0.799 - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
9. cradd ENSDARG00000028192 153 1.79 1.000 - - - 0.790 - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
10. KCNN2 ENSDARG00000014939 25 1.782 0.983 0.799 - - - - - - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
11. bcl11aa ENSDARG00000061352 61 1.762 1.000 - 0.762 - - - - - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
12. C3AR1 18 1.755 1.000 - 0.755 - - - - - - C3a anaphylatoxin chemotactic receptor
13. mapk8a ENSDARG00000031888 44 1.748 0.842 0.906 - - - - - - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
14. eif2b1_1 ENSDARG00000091402, ENSDARG00000114640 36 1.737 - 0.799 - - - - - - 0.938 eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
15. fbxo43 ENSDARG00000104186 40 1.702 1.000 0.702 - - - - - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
16. nanog ENSDARG00000075113 10 1.696 - 0.799 - - 0.897 - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
17. zgc:110434_1 30 1.689 0.871 - - - - - - 0.818 - zgc:110434
18. CU984579.1 ENSDARG00000116863 15 1.681 - 0.799 0.882 - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
19. si:dkey-281i15.9 si:dkey-281i15.9 1 1.681 - 0.799 0.882 - - - - - -
20. ENSDARG00000092910 ENSDARG00000092910 44 1.67 0.871 0.799 - - - - - - -
21. dph2 ENSDARG00000078077 36 1.663 0.838 0.825 - - - - - - - DPH2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030219-100]
22. osbpl6 ENSDARG00000063730 2 1.659 - 0.799 0.860 - - - - - - oxysterol binding protein-like 6 [Source:ZFIN;Acc:ZDB-GENE-070912-206]
23. fibinb ENSDARG00000087196, ENSDARG00000110737 53 1.655 0.773 - 0.882 - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
24. LPHN2_1 LPHN2_1 3 1.631 - 0.799 0.832 - - - - - -
25. arl13a ENSDARG00000052575 25 1.623 0.723 - - - 0.900 - - - - ADP-ribosylation factor-like 13A [Source:ZFIN;Acc:ZDB-GENE-040426-1790]
26. si:dkey-23a23.2 ENSDARG00000023036 123 1.622 0.916 0.706 - - - - - - - si:dkey-23a23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-158]
27. adh8a ENSDARG00000091211, ENSDARG00000113750 19 1.601 - 0.786 0.815 - - - - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
28. pkp1a ENSDARG00000090598 6 1.59 - - 0.829 - - - - 0.761 - plakophilin 1a [Source:ZFIN;Acc:ZDB-GENE-110411-77]
29. tmem175 ENSDARG00000076376, ENSDARG00000111449 136 1.556 0.765 0.791 - - - - - - - transmembrane protein 175 [Source:ZFIN;Acc:ZDB-GENE-070705-79]
30. CU367845.1 CU367845.1 215 1.555 0.756 0.799 - - - - - - -
31. si:dkey-182i3.9 ENSDARG00000096575 56 1.552 - 0.799 - - - - - - 0.753 si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
32. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1.54 0.741 0.799 - - - - - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
33. ampd2 ampd2 6 1.54 - 0.799 0.741 - - - - - -
34. DLGAP2 DLGAP2 36 1.522 0.723 0.799 - - - - - - -
35. CNTNAP3 ENSDARG00000067824 25 1.512 0.713 0.799 - - - - - - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
36. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1 1.000 - - - - - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
37. si:dkey-60a16.4 si:dkey-60a16.4 14 1 1.000 - - - - - - - -
38. shox2 ENSDARG00000075713 104 1 1.000 - - - - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
39. cyp2aa2 ENSDARG00000104811 77 1 1.000 - - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
40. si:ch211-15j1.1 ENSDARG00000093177 1 1 1.000 - - - - - - - - si:ch211-15j1.1 [Source:ZFIN;Acc:ZDB-GENE-081031-25]
41. xdh ENSDARG00000055240 250 1 1.000 - - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
42. ZNF512B ENSDARG00000071055 7 1 - - - - - - - 1.000 - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
43. znf106b ENSDARG00000091947 108 1 1.000 - - - - - - - - zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
44. scd ENSDARG00000033662 146 1 1.000 - - - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
45. BX928744.1 BX928744.1 15 1 1.000 - - - - - - - -
46. CU672227.1 ENSDARG00000105807 15 1 1.000 - - - - - - - -
47. fam19a5 fam19a5 8 1 1.000 - - - - - - - -
48. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 1 1.000 - - - - - - - - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
49. itga8 ENSDARG00000078717 215 1 1.000 - - - - - - - - integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]
50. AL935181.2 AL935181.2 9 1 1.000 - - - - - - - -
51. c6ast1 ENSDARG00000069216 8 1 1.000 - - - - - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
52. GRM8_1 GRM8_1 85 1 1.000 - - - - - - - -
53. figf 48 1 1.000 - - - - - - - - c-fos induced growth factor, transcript variant X2
54. LRCH4 ENSDARG00000068258 22 1 - - - - - - - 1.000 - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
55. lrrc4bb ENSDARG00000014792 47 1 1.000 - - - - - - - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
56. ch25hl2 ENSDARG00000038728 100 1 1.000 - - - - - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
57. si:zfos-1505d6.3 ENSDARG00000089966 3 1 - - - - - - - 1.000 - si:zfos-1505d6.3 [Source:ZFIN;Acc:ZDB-GENE-120214-22]
58. atxn1b ENSDARG00000060862 345 1 1.000 - - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
59. HIST1H2BA ENSDARG00000116654 10 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
60. oprm1 ENSDARG00000039434 22 1 1.000 - - - - - - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
61. CR318593.1_1 CR318593.1_1 8 1 1.000 - - - - - - - -
62. CABZ01066717.2 CABZ01066717.2 10 1 1.000 - - - - - - - -
63. CABZ01081748.1 ENSDARG00000102139 31 1 1.000 - - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
64. CABZ01064968.2 CABZ01064968.2 20 1 1.000 - - - - - - - -
65. depdc1b 1 1 1.000 - - - - - - - - DEP domain containing 1B
66. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
67. map3k8 ENSDARG00000061710 76 1 1.000 - - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
68. si:ch211-191a6.3 si:ch211-191a6.3 6 1 1.000 - - - - - - - -
69. si:ch211-63o20.7 ENSDARG00000042000 93 1 1.000 - - - - - - - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
70. SLC16A7 ENSDARG00000098258 4 1 1.000 - - - - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
71. syne3 ENSDARG00000023237 23 1 - - - - - - - 1.000 - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
72. cog1 ENSDARG00000105131 35 1 1.000 - - - - - - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
73. pcdh1g26 ENSDARG00000099931 1 1 - - - - - - - 1.000 - protocadherin 1 gamma 26 [Source:ZFIN;Acc:ZDB-GENE-050609-21]
74. pak1_1 ENSDARG00000103959 28 1 1.000 - - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
75. rgs11 ENSDARG00000037646 24 1 1.000 - - - - - - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
76. slc5a2 ENSDARG00000100919 47 1 1.000 - - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
77. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
78. zgc:110191 zgc:110191 359 1 1.000 - - - - - - - -
79. sez6l ENSDARG00000100594 35 1 1.000 - - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
80. prelp ENSDARG00000070597 99 1 1.000 - - - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
81. GPR22_1 GPR22_1 28 1 1.000 - - - - - - - -
82. CR848784.2 ENSDARG00000111157 16 1 1.000 - - - - - - - -
83. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 1 1.000 - - - - - - - -
84. setmar ENSDARG00000074836 29 1 1.000 - - - - - - - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
85. BX511066.3 BX511066.3 1 1 - - - - - - - 1.000 -
86. ciz1a ENSDARG00000089781 20 1 1.000 - - - - - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
87. rab3da ENSDARG00000018107 28 1 1.000 - - - - - - - - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
88. C18H15orf61 C18H15orf61 104 1 1.000 - - - - - - - -
89. CABZ01118678.1 ENSDARG00000091359 2 1 1.000 - - - - - - - - calmodulin-regulated spectrin-associated protein 3-like [Source:NCBI gene;Acc:100007608]
90. msxa msxa 263 1 1.000 - - - - - - - -
91. si:ch211-113a14.10_1 si:ch211-113a14.10_1 59 1 - - - - - - - 1.000 -
92. UNC5CL UNC5CL 4 1 - - - - - - - 1.000 -
93. FHDC1 ENSDARG00000074812 2 1 1.000 - - - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
94. ADAMTS15_1 ADAMTS15_1 11 1 1.000 - - - - - - - -
95. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 1.000 - - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
96. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 1.000 - - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
97. MLLT4 MLLT4 67 1 1.000 - - - - - - - -
98. BX470254.1_1 ENSDARG00000097402 50 1 1.000 - - - - - - - -
99. pls1 ENSDARG00000039272 39 1 1.000 - - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
100. si:ch73-269m14.3 ENSDARG00000096305 28 1 1.000 - - - - - - - - si:ch73-269m14.3 [Source:ZFIN;Acc:ZDB-GENE-120215-13]

There are 954 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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