Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp47

Gene Name Gene ID Reads Annotation
usp47 ENSDARG00000102645 16 ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]










Genes with expression patterns similar to usp47

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp47 ENSDARG00000102645 16 6 1.000 1.000 1.000 - 1.000 - - 1.000 1.000 ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
2. BX000999.2 BX000999.2 2353 2.799 1.000 0.799 - - - - - 1.000 -
3. znf804b ENSDARG00000103396 11 2.504 - 0.799 0.882 - - - - - 0.823 zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
4. bckdhb ENSDARG00000014676 17 1.979 1.000 0.979 - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
5. si:ch73-155e10.1 si:ch73-155e10.1 13 1.831 1.000 - 0.831 - - - - - -
6. scn1a 8 1.799 1.000 0.799 - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
7. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.799 1.000 0.799 - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
8. si:dkey-51d8.6 ENSDARG00000090769 17 1.799 1.000 0.799 - - - - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
9. cradd ENSDARG00000028192 153 1.79 1.000 - - - 0.790 - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
10. KCNN2 ENSDARG00000014939 25 1.782 0.983 0.799 - - - - - - - potassium calcium-activated channel subfamily N member 2 [Source:HGNC Symbol;Acc:HGNC:6291]
11. bcl11aa ENSDARG00000061352 61 1.762 1.000 - 0.762 - - - - - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
12. C3AR1 18 1.755 1.000 - 0.755 - - - - - - C3a anaphylatoxin chemotactic receptor
13. mapk8a ENSDARG00000031888 44 1.748 0.842 0.906 - - - - - - - mitogen-activated protein kinase 8a [Source:ZFIN;Acc:ZDB-GENE-080218-17]
14. eif2b1_1 ENSDARG00000091402, ENSDARG00000114640 36 1.737 - 0.799 - - - - - - 0.938 eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
15. fbxo43 ENSDARG00000104186 40 1.702 1.000 0.702 - - - - - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
16. nanog ENSDARG00000075113 10 1.696 - 0.799 - - 0.897 - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
17. zgc:110434_1 30 1.689 0.871 - - - - - - 0.818 - zgc:110434
18. CU984579.1 ENSDARG00000116863 15 1.681 - 0.799 0.882 - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
19. si:dkey-281i15.9 si:dkey-281i15.9 1 1.681 - 0.799 0.882 - - - - - -
20. ENSDARG00000092910 ENSDARG00000092910 44 1.67 0.871 0.799 - - - - - - -
21. dph2 ENSDARG00000078077 36 1.663 0.838 0.825 - - - - - - - DPH2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030219-100]
22. osbpl6 ENSDARG00000063730 2 1.659 - 0.799 0.860 - - - - - - oxysterol binding protein-like 6 [Source:ZFIN;Acc:ZDB-GENE-070912-206]
23. fibinb ENSDARG00000087196, ENSDARG00000110737 53 1.655 0.773 - 0.882 - - - - - - fin bud initiation factor b [Source:ZFIN;Acc:ZDB-GENE-050417-423]
24. LPHN2_1 LPHN2_1 3 1.631 - 0.799 0.832 - - - - - -
25. arl13a ENSDARG00000052575 25 1.623 0.723 - - - 0.900 - - - - ADP-ribosylation factor-like 13A [Source:ZFIN;Acc:ZDB-GENE-040426-1790]
26. si:dkey-23a23.2 ENSDARG00000023036 123 1.622 0.916 0.706 - - - - - - - si:dkey-23a23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-158]
27. adh8a ENSDARG00000091211, ENSDARG00000113750 19 1.601 - 0.786 0.815 - - - - - - alcohol dehydrogenase 8a [Source:ZFIN;Acc:ZDB-GENE-030529-3]
28. pkp1a ENSDARG00000090598 6 1.59 - - 0.829 - - - - 0.761 - plakophilin 1a [Source:ZFIN;Acc:ZDB-GENE-110411-77]
29. tmem175 ENSDARG00000076376, ENSDARG00000111449 136 1.556 0.765 0.791 - - - - - - - transmembrane protein 175 [Source:ZFIN;Acc:ZDB-GENE-070705-79]
30. CU367845.1 CU367845.1 215 1.555 0.756 0.799 - - - - - - -
31. si:dkey-182i3.9 ENSDARG00000096575 56 1.552 - 0.799 - - - - - - 0.753 si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
32. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1.54 0.741 0.799 - - - - - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
33. ampd2 ampd2 6 1.54 - 0.799 0.741 - - - - - -
34. DLGAP2 DLGAP2 36 1.522 0.723 0.799 - - - - - - -
35. CNTNAP3 ENSDARG00000067824 25 1.512 0.713 0.799 - - - - - - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
36. depdc1b 1 1 1.000 - - - - - - - - DEP domain containing 1B
37. SNORA38 SNORA38 574 1 1.000 - - - - - - - -
38. zgc:163077 ENSDARG00000101593 60 1 1.000 - - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
39. msxa msxa 263 1 1.000 - - - - - - - -
40. si:ch211-132b12.7 ENSDARG00000068374 30 1 1.000 - - - - - - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
41. si:dkey-178e17.2 1 1 1.000 - - - - - - - - si:dkey-178e17.2, transcript variant X2
42. HIST1H2BA ENSDARG00000116654 10 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
43. dand5 ENSDARG00000036471 8 1 1.000 - - - - - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
44. MPPED1 ENSDARG00000088181 117 1 1.000 - - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
45. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
46. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
47. me1 ENSDARG00000053215 107 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
48. si:zfos-1505d6.3 ENSDARG00000089966 3 1 - - - - - - - 1.000 - si:zfos-1505d6.3 [Source:ZFIN;Acc:ZDB-GENE-120214-22]
49. cog1 ENSDARG00000105131 35 1 1.000 - - - - - - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
50. htra1b ENSDARG00000014907 146 1 1.000 - - - - - - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
51. CABZ01044346.1 CABZ01044346.1 12 1 1.000 - - - - - - - -
52. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1 1.000 - - - - - - - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
53. shox2 ENSDARG00000075713 104 1 1.000 - - - - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
54. xdh ENSDARG00000055240 250 1 1.000 - - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
55. BX005001.2 BX005001.2 2 1 - - - - - - - 1.000 -
56. FGFBP3 FGFBP3 993 1 1.000 - - - - - - - -
57. itga8 ENSDARG00000078717 215 1 1.000 - - - - - - - - integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]
58. asic4b ENSDARG00000004243 31 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
59. TRIM8 TRIM8 5 1 - - - - - - - 1.000 -
60. NMUR1 NMUR1 30 1 1.000 - - - - - - - -
61. si:ch1073-296i8.2 ENSDARG00000093773 36 1 1.000 - - - - - - - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]
62. SYNPO 2 1 - - - - - - - 1.000 - synaptopodin, transcript variant X2
63. sdccag3 239 1 1.000 - - - - - - - - serologically defined colon cancer antigen 3, transcript variant X2
64. si:dkey-247m21.3 ENSDARG00000001906 1 1 1.000 - - - - - - - - si:dkey-247m21.3 [Source:ZFIN;Acc:ZDB-GENE-091204-249]
65. drd2l ENSDARG00000014858 1 1 1.000 - - - - - - - - dopamine receptor D2 like [Source:ZFIN;Acc:ZDB-GENE-030910-1]
66. si:ch211-171h4.7 ENSDARG00000088408 168 1 1.000 - - - - - - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
67. scn1a_2 1 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
68. si:dkey-148e22.3 si:dkey-148e22.3 4 1 1.000 - - - - - - - -
69. CECR6 25 1 1.000 - - - - - - - - cat eye syndrome chromosome region, candidate 6
70. KLHL35 ENSDARG00000063577 77 1 1.000 - - - - - - - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
71. paqr7a ENSDARG00000100462 15 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
72. sez6l ENSDARG00000100594 35 1 1.000 - - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
73. FHDC1 ENSDARG00000074812 2 1 1.000 - - - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
74. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
75. CR450785.2 ENSDARG00000111875 1 1 1.000 - - - - - - - -
76. BX511066.3 BX511066.3 1 1 - - - - - - - 1.000 -
77. figf 48 1 1.000 - - - - - - - - c-fos induced growth factor, transcript variant X2
78. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
79. myl2b ENSDARG00000053424 226 1 1.000 - - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
80. zgc:154054 ENSDARG00000099923 19 1 1.000 - - - - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
81. si:dkey-4m13.3 6 1 1.000 - - - - - - - - si:dkey-4m13.3
82. CABZ01066717.2 CABZ01066717.2 10 1 1.000 - - - - - - - -
83. BX119910.3 BX119910.3 7 1 1.000 - - - - - - - -
84. trmt2b ENSDARG00000033967 127 1 1.000 - - - - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
85. ca4b ENSDARG00000042293 5 1 1.000 - - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
86. dapk3 ENSDARG00000074447 12 1 1.000 - - - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
87. CU672227.1 ENSDARG00000105807 15 1 1.000 - - - - - - - -
88. SERINC4 ENSDARG00000044815 45 1 1.000 - - - - - - - - serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
89. ADAMTS15_1 ADAMTS15_1 11 1 1.000 - - - - - - - -
90. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
91. syne3 ENSDARG00000023237 23 1 - - - - - - - 1.000 - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
92. si:dkey-208k4.1 si:dkey-208k4.1 15 1 1.000 - - - - - - - -
93. LRCH4 ENSDARG00000068258 22 1 - - - - - - - 1.000 - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
94. ptchd4 ENSDARG00000008249 17 1 1.000 - - - - - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
95. ftr14l ENSDARG00000078254 2 1 1.000 - - - - - - - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
96. c6ast4 ENSDARG00000052578 6 1 1.000 - - - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
97. opn5 ENSDARG00000070110 18 1 1.000 - - - - - - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
98. pcdh2ab7 7 1 1.000 - - - - - - - - protocadherin 2 alpha b 7
99. pls1 ENSDARG00000039272 39 1 1.000 - - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
100. rab3da ENSDARG00000018107 28 1 1.000 - - - - - - - - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]

There are 954 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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