Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for usp45

Gene Name Gene ID Reads Annotation
usp45 ENSDARG00000075013 227 ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]










Genes with expression patterns similar to usp45

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp45 ENSDARG00000075013 227 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
2. CABZ01066717.1 CABZ01066717.1 351 1.955 - 0.991 - - - - - 0.964 -
3. BX000999.4_1 BX000999.4_1 222 1.915 - 0.953 - - - - - 0.962 -
4. si:dkey-228i19.34 si:dkey-228i19.34 43 1.86 0.863 0.997 - - - - - - -
5. NUDT12 ENSDARG00000100813 378 1.826 - 0.851 - - - - - 0.975 - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
6. vhl ENSDARG00000070617 663 1.81 0.846 - - - - - - 0.964 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
7. TMEM71 TMEM71 696 1.788 - 0.884 - - - - - 0.904 -
8. capn7 ENSDARG00000102987 386 1.768 - 0.809 - - - - - 0.959 - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
9. zgc:165582 ENSDARG00000074362 198 1.768 0.847 0.921 - - - - - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
10. C16H8orf76 C16H8orf76 329 1.739 - - - - - - 0.786 0.953 -
11. mgaa ENSDARG00000078784 1344 1.736 - - - - - - 0.832 0.904 - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
12. exd3 ENSDARG00000063140 119 1.711 - - - - - - 0.746 0.965 - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
13. SMAD4_1 SMAD4_1 377 1.693 0.833 0.860 - - - - - - -
14. CR847925.1 CR847925.1 835 1.681 - 0.738 - - - - - 0.943 -
15. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1.68 0.863 - - - - - 0.817 - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
16. CR388231.3 ENSDARG00000105601 2404 1.678 0.758 - - - - - - 0.920 -
17. pogza ENSDARG00000054778 1495 1.664 - - - - - - 0.714 0.950 - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
18. smfn ENSDARG00000009806 1280 1.663 - 0.704 - - - - - 0.959 - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
19. pdf ENSDARG00000013950 293 1.657 - 0.939 - - - 0.718 - - - peptide deformylase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050913-42]
20. hmgcrb ENSDARG00000105206 2080 1.648 - 0.830 - - - - - 0.818 - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
21. dnttip2 ENSDARG00000057648 2381 1.642 - 0.721 - - - - - 0.921 - deoxynucleotidyltransferase, terminal, interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080513-5]
22. spock3 ENSDARG00000070266, ENSDARG00000110158 934 1.63 - 0.930 - - - - - 0.700 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
23. sas sas 1783 1.622 - 0.873 - - - - 0.749 - -
24. rfc2 ENSDARG00000014274 1533 1.617 - 0.717 - - - - - 0.900 - replication factor C (activator 1) 2 [Source:ZFIN;Acc:ZDB-GENE-050306-29]
25. mafk ENSDARG00000100947 1460 1.6 - - - - - - 0.743 0.857 - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
26. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.578 - 0.764 - - - - 0.814 - - target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
27. glg1b ENSDARG00000101210 177 1.569 - - - - - 0.806 0.763 - - golgi glycoprotein 1b [Source:ZFIN;Acc:ZDB-GENE-060825-255]
28. ncaph2 ENSDARG00000033757 1042 1.56 - 0.754 - - - - - 0.806 - non-SMC condensin II complex, subunit H2 [Source:ZFIN;Acc:ZDB-GENE-041210-172]
29. s1pr5b ENSDARG00000052192 52 1.548 0.817 - - - - 0.731 - - - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
30. slc6a11a ENSDARG00000074002 189 1.537 - - 0.720 - - - 0.817 - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
31. cdc42ep4a ENSDARG00000101457, ENSDARG00000114480 1226 1.533 - 0.796 - - - - - 0.737 - CDC42 effector protein (Rho GTPase binding) 4a [Source:ZFIN;Acc:ZDB-GENE-040704-22]
32. sirt2 ENSDARG00000011488 5389 1.514 - 0.772 - - - - - 0.742 - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
33. crfb16 ENSDARG00000075181 40 1.49 0.759 - - - - 0.731 - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
34. ino80e ENSDARG00000022939, ENSDARG00000101892 216 1.469 0.732 - - - - - 0.737 - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
35. ube2d2l ENSDARG00000099749 1462 1.465 - 0.735 - - - - - 0.730 - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
36. synm ENSDARG00000062350, ENSDARG00000113948, ENSDARG00000114029 483 1.44 - - - - - - 0.702 0.738 - synemin, intermediate filament protein [Source:ZFIN;Acc:ZDB-GENE-050419-81]
37. pspc1 ENSDARG00000006621 966 1.434 - 0.730 - - - - - 0.704 - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
38. dhrs13a.1 ENSDARG00000026322 336 1.426 - 0.726 - - - - - - 0.700 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-58]
39. si:ch1073-155h21.1 ENSDARG00000007582 137 0.998 - 0.998 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
40. MAP3K2 ENSDARG00000062884 34 0.997 - 0.997 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
41. ppapdc2 ppapdc2 67 0.997 - 0.997 - - - - - - -
42. cd74a ENSDARG00000009087 20 0.997 - 0.997 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
43. U3_5 U3_5 67 0.997 - 0.997 - - - - - - -
44. CABZ01109624.1 CABZ01109624.1 25 0.997 - 0.997 - - - - - - -
45. smdt1 smdt1 99 0.997 - 0.997 - - - - - - -
46. si:ch211-39a7.1 ENSDARG00000037427 31 0.997 - 0.997 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
47. ZP2 ZP2 14 0.997 - 0.997 - - - - - - -
48. kcnk13a ENSDARG00000008212 136 0.996 - 0.996 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
49. CT573322.1 CT573322.1 38 0.996 - 0.996 - - - - - - -
50. SLC38A9 ENSDARG00000032769 35 0.996 - 0.996 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
51. si:ch211-105d18.6 si:ch211-105d18.6 59 0.995 - 0.995 - - - - - - -
52. unc13d ENSDARG00000078249 91 0.995 - 0.995 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
53. zgc:109744 ENSDARG00000070800 262 0.995 - 0.995 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
54. C12H10orf2 C12H10orf2 245 0.995 - 0.995 - - - - - - -
55. si:dkey-154p10.3 ENSDARG00000068366 153 0.994 - 0.994 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
56. plce1 ENSDARG00000087921 44 0.994 - 0.994 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
57. CR388047.3 ENSDARG00000117023 89 0.993 - 0.993 - - - - - - -
58. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.993 - 0.993 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
59. pgap2 ENSDARG00000044596 60 0.993 - 0.993 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
60. si:dkey-114b16.4 si:dkey-114b16.4 35 0.993 - 0.993 - - - - - - -
61. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.993 - 0.993 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
62. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.993 - 0.993 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
63. CABZ01114089.1 CABZ01114089.1 127 0.993 - 0.993 - - - - - - -
64. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.993 - 0.993 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
65. cyp2aa1 ENSDARG00000099003 297 0.992 - 0.992 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
66. TEAD1 TEAD1 43 0.991 - 0.991 - - - - - - -
67. CR376783.1 ENSDARG00000074235 259 0.99 - 0.990 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
68. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.989 - 0.989 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
69. fam63b 484 0.987 - 0.987 - - - - - - - family with sequence similarity 63, member B
70. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.986 - 0.986 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
71. TM2D2 ENSDARG00000035515 561 0.986 - 0.986 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
72. foxn4 ENSDARG00000010591 2332 0.985 - 0.985 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
73. casp3b ENSDARG00000055045 54 0.985 - 0.985 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
74. casp2 ENSDARG00000062052 559 0.984 - 0.984 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
75. rnf34a ENSDARG00000038300 179 0.983 - 0.983 - - - - - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
76. UBASH3B UBASH3B 292 0.982 - 0.982 - - - - - - -
77. gtf3c3 ENSDARG00000043247 202 0.982 - - - - - - - 0.982 - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
78. si:dkeyp-123a12.2 ENSDARG00000115029 78 0.981 - 0.981 - - - - - - - si:dkeyp-123a12.2 [Source:ZFIN;Acc:ZDB-GENE-041210-271]
79. NUDT8 ENSDARG00000007722 329 0.981 - 0.981 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
80. alg9 ENSDARG00000012840 631 0.981 - 0.981 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
81. siae ENSDARG00000040527, ENSDARG00000111850 186 0.981 - - - - - - - 0.981 - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
82. trmt1l ENSDARG00000042057 466 0.98 - 0.980 - - - - - - - tRNA methyltransferase 1-like [Source:ZFIN;Acc:ZDB-GENE-041014-189]
83. cflara ENSDARG00000055966 464 0.98 - 0.980 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
84. tmem192 ENSDARG00000037484, ENSDARG00000116740 269 0.98 - 0.980 - - - - - - - transmembrane protein 192 [Source:ZFIN;Acc:ZDB-GENE-040426-2254]
85. obfc1 obfc1 156 0.979 - - - - - - - 0.979 -
86. cmasb 499 0.979 - 0.979 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
87. slc25a40 ENSDARG00000015856 359 0.979 - - - - - - - 0.979 - solute carrier family 25, member 40 [Source:ZFIN;Acc:ZDB-GENE-040718-52]
88. si:ch211-215d8.2 ENSDARG00000093233 784 0.978 - 0.978 - - - - - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
89. kcnj1a.4 ENSDARG00000090635 356 0.978 - 0.978 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
90. fam57ba ENSDARG00000026875 504 0.978 - 0.978 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
91. pnpla2 ENSDARG00000089390 129 0.977 - 0.977 - - - - - - - patatin-like phospholipase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120913-3]
92. nipsnap1 ENSDARG00000005320 330 0.976 - 0.976 - - - - - - - nipsnap homolog 1 (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-991008-17]
93. DENND1A ENSDARG00000014592 436 0.975 - - - - - - - 0.975 - DENN/MADD domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-060404-6]
94. lingo4b ENSDARG00000078527 235 0.975 - - - - - - - 0.975 - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
95. rab33ba ENSDARG00000052290 914 0.975 - 0.975 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
96. acad11 ENSDARG00000045411 350 0.975 - 0.975 - - - - - - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
97. tbcelb ENSDARG00000019525 299 0.975 - 0.975 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
98. CR954963.1 ENSDARG00000097153 1135 0.975 - - - - - - - 0.975 -
99. ATP5J 343 0.974 - 0.974 - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
100. cacng6a ENSDARG00000036457 344 0.974 - 0.974 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]

There are 1486 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA