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Results for usp44

Gene Name Gene ID Reads Annotation
usp44 ENSDARG00000089861 1532 ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]










Genes with expression patterns similar to usp44

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp44 ENSDARG00000089861 1532 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 44 [Source:ZFIN;Acc:ZDB-GENE-040426-774]
2. numb ENSDARG00000027279 2905 2.603 - - 0.996 - 0.876 0.731 - - - numb homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060422-1]
3. LPL_1 LPL_1 1150 1.917 - - 0.998 - 0.919 - - - -
4. cbx4 ENSDARG00000099441 372 1.814 - 0.896 - - 0.918 - - - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
5. TACC2 1702 1.808 - 0.812 0.996 - - - - - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
6. ATOX1 ENSDARG00000087693 4016 1.806 - - 0.988 - 0.818 - - - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
7. PKP3 PKP3 391 1.796 - 0.799 0.997 - - - - - -
8. mycla ENSDARG00000006003 1866 1.766 - 0.851 - - 0.915 - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
9. thoc3 ENSDARG00000056517 909 1.759 - 0.854 - - 0.905 - - - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
10. ing4 ENSDARG00000030716 5908 1.756 - - 0.983 - 0.773 - - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
11. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.739 - - 0.970 - - - 0.769 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
12. exoc5 ENSDARG00000060323 2450 1.732 - - 0.998 - - 0.734 - - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
13. abcf2a ENSDARG00000038785 2065 1.723 - - - - 0.909 - 0.814 - - ATP-binding cassette, sub-family F (GCN20), member 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8714]
14. PEG3_5 PEG3_5 1624 1.718 - 0.720 0.998 - - - - - -
15. papolg ENSDARG00000012141 1445 1.681 0.752 - - - 0.929 - - - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
16. dusp2 ENSDARG00000098108 353 1.668 - 0.829 - - - 0.839 - - - dual specificity phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-188]
17. nudt2 ENSDARG00000058728 371 1.656 - 0.784 - - 0.872 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
18. leo1 ENSDARG00000055357 1644 1.649 - 0.782 - - 0.867 - - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
19. ywhaqa ENSDARG00000042539 7034 1.649 - - 0.897 - 0.752 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-040122-5]
20. strumpellin 212 1.647 - 0.908 - - - 0.739 - - - strumpellin
21. wu:fq41a10 wu:fq41a10 7009 1.645 - - - - 0.923 - 0.722 - -
22. fam13a ENSDARG00000075564 1905 1.644 - 0.764 - - 0.880 - - - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
23. eif3ja ENSDARG00000012603 6324 1.644 - - - - 0.922 - 0.722 - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
24. PEG3_38 PEG3_38 521 1.639 - - - - 0.906 0.733 - - -
25. tfap4 ENSDARG00000103923 2203 1.639 - - - - 0.903 - 0.736 - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
26. psmd12 ENSDARG00000052377 7763 1.635 - 0.737 0.898 - - - - - - proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
27. chuk ENSDARG00000011662 1668 1.605 - - - - 0.850 0.755 - - - conserved helix-loop-helix ubiquitous kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1069]
28. cul4b ENSDARG00000060510 6053 1.597 - - - - 0.870 - 0.727 - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
29. plxna1 plxna1 1357 1.597 0.714 - - - 0.883 - - - -
30. pak2b ENSDARG00000018476 4331 1.596 - - - - 0.888 - 0.708 - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
31. POLD4 POLD4 626 1.595 - - - - - 0.887 - - 0.708
32. BX000701.2 ENSDARG00000105074 1123 1.593 - 0.742 - - 0.851 - - - - gastrula zinc finger protein XlCGF7.1-like [Source:NCBI gene;Acc:101884528]
33. mrpl40 ENSDARG00000043554 2198 1.589 - - - - 0.815 - 0.774 - - mitochondrial ribosomal protein L40 [Source:ZFIN;Acc:ZDB-GENE-040912-37]
34. pi4k2b ENSDARG00000013881 1337 1.584 - 0.740 - - 0.844 - - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
35. sema3gb ENSDARG00000013607 1531 1.579 - - - - 0.874 0.705 - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
36. psma4 ENSDARG00000045928 5112 1.575 - - - - 0.860 - 0.715 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
37. sumo3a ENSDARG00000028119 13447 1.575 - - 0.864 - - - 0.711 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
38. dip2ba ENSDARG00000005350, ENSDARG00000111011, ENSDARG00000111214 1640 1.571 - - - - 0.837 - 0.734 - - disco-interacting protein 2 homolog Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2305]
39. sp1 ENSDARG00000088347 1697 1.568 - - - 0.717 0.851 - - - - sp1 transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-2829]
40. ankrd9 ENSDARG00000028804 392 1.559 - 0.774 - - - 0.785 - - - ankyrin repeat domain 9 [Source:ZFIN;Acc:ZDB-GENE-041114-3]
41. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.554 - - - - 0.831 - 0.723 - - actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
42. hcls1 ENSDARG00000012729 1547 1.548 - - - - 0.809 0.739 - - - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
43. hsp90aa1.2 ENSDARG00000024746 5210 1.544 - - - - 0.780 - 0.764 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]
44. zfand3 ENSDARG00000052833 2682 1.543 - - - - 0.814 - 0.729 - - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
45. sema3e ENSDARG00000036571, ENSDARG00000116446 115 1.529 0.739 0.790 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:ZFIN;Acc:ZDB-GENE-030131-7864]
46. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.508 - - - - - - 0.767 0.741 - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
47. CCDC134_1 CCDC134_1 200 1.489 - 0.749 - - - - - 0.740 -
48. JHDM1D JHDM1D 2277 1.489 - 0.781 - - 0.708 - - - -
49. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 1.482 - - - 0.759 - - 0.723 - - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
50. actr1 ENSDARG00000011611 3879 1.48 - 0.774 - - - - 0.706 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
51. foxp1b ENSDARG00000014181 2594 1.479 - 0.743 - - - 0.736 - - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
52. NECAB3 ENSDARG00000074794 379 1.473 0.711 0.762 - - - - - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
53. ube2i ube2i 13024 1.471 - - 0.700 - - - 0.771 - -
54. ints1 ENSDARG00000100419 1958 1.467 - 0.735 - - - - 0.732 - - integrator complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6523]
55. kal1a kal1a 684 1.463 - 0.748 - - - - 0.715 - -
56. kpnb3 ENSDARG00000040245 7967 1.461 - - - - - 0.733 0.728 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
57. rassf10a 417 1.456 - 0.743 - - - 0.713 - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10a
58. emx1 ENSDARG00000039569 787 1.455 - 0.742 - - - 0.713 - - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
59. hoxd4a ENSDARG00000059276 1516 1.453 - - - - - 0.736 0.717 - - homeobox D4a [Source:ZFIN;Acc:ZDB-GENE-980526-214]
60. gng12a ENSDARG00000003375 1250 1.451 - 0.750 - - - - - 0.701 - guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555]
61. cers2b ENSDARG00000058992 5319 1.44 - - - - 0.724 0.716 - - - ceramide synthase 2b [Source:ZFIN;Acc:ZDB-GENE-110408-40]
62. mgst3 mgst3 3982 1.426 - - - - 0.717 0.709 - - -
63. las1l ENSDARG00000062457, ENSDARG00000114475 3987 1.425 - 0.705 - - - - 0.720 - - LAS1-like, ribosome biogenesis factor [Source:ZFIN;Acc:ZDB-GENE-030131-3625]
64. cox16 ENSDARG00000039136 1066 1.414 0.706 - - - - - - 0.708 - cytochrome c oxidase assembly factor COX16 [Source:ZFIN;Acc:ZDB-GENE-050417-60]
65. tcf7l1b ENSDARG00000007369 2785 1.409 - 0.703 - - - - 0.706 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
66. nat9 ENSDARG00000071425, ENSDARG00000111763 1462 0.998 - - 0.998 - - - - - - N-acetyltransferase 9 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-030131-5097]
67. pih1d2 ENSDARG00000014849 389 0.998 - - 0.998 - - - - - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
68. si:dkey-57a22.11 ENSDARG00000092651 660 0.998 - - 0.998 - - - - - - si:dkey-57a22.11 [Source:ZFIN;Acc:ZDB-GENE-081104-423]
69. zgc:195282 ENSDARG00000079488 475 0.998 - - 0.998 - - - - - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
70. eaf1 ENSDARG00000070795, ENSDARG00000113962 834 0.998 - - 0.998 - - - - - - ELL associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-109]
71. fam102aa ENSDARG00000102566 903 0.998 - - 0.998 - - - - - - family with sequence similarity 102, member Aa [Source:ZFIN;Acc:ZDB-GENE-081104-233]
72. taf1b ENSDARG00000028937 879 0.998 - - 0.998 - - - - - - TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2]
73. trim36 ENSDARG00000062794 785 0.998 - - 0.998 - - - - - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
74. CU638868.1 ENSDARG00000115797 487 0.998 - - 0.998 - - - - - - transmembrane protein 26a [Source:NCBI gene;Acc:794507]
75. atpaf1 ENSDARG00000042799 1309 0.997 - - 0.997 - - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-030219-10]
76. C19H1orf85 C19H1orf85 1587 0.997 - - 0.997 - - - - - -
77. suv420h2 2186 0.997 - - 0.997 - - - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
78. si:ch73-303g23.4 si:ch73-303g23.4 386 0.997 - - 0.997 - - - - - -
79. dlg1l ENSDARG00000102216 1960 0.997 - - 0.997 - - - - - - discs, large (Drosophila) homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-050222-3]
80. tmem223 ENSDARG00000069494 1528 0.997 - - 0.997 - - - - - - transmembrane protein 223 [Source:ZFIN;Acc:ZDB-GENE-040801-113]
81. plekhh1 ENSDARG00000053835 2123 0.997 - - 0.997 - - - - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
82. si:ch73-7i4.1 ENSDARG00000094554 771 0.997 - - 0.997 - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
83. si:dkey-94l16.4 ENSDARG00000090142 791 0.997 - - 0.997 - - - - - - si:dkey-94l16.4 [Source:ZFIN;Acc:ZDB-GENE-121214-291]
84. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 0.997 - - 0.997 - - - - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
85. acox1 ENSDARG00000014727 660 0.997 - - 0.997 - - - - - - acyl-CoA oxidase 1, palmitoyl [Source:ZFIN;Acc:ZDB-GENE-041010-219]
86. mfsd11 ENSDARG00000102828 1043 0.997 - - 0.997 - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
87. brms1la ENSDARG00000006235 2011 0.997 - - 0.997 - - - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
88. si:ch211-209n20.57 si:ch211-209n20.57 1188 0.997 - - 0.997 - - - - - -
89. bre bre 1233 0.997 - - 0.997 - - - - - -
90. abi1b ENSDARG00000062991 1564 0.997 - - 0.997 - - - - - - abl-interactor 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1182]
91. ck2b ck2b 781 0.997 - - 0.997 - - - - - -
92. sp3b ENSDARG00000007812 2928 0.997 - - 0.997 - - - - - - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
93. kifc3 ENSDARG00000054978 1220 0.997 - - 0.997 - - - - - - kinesin family member C3 [Source:ZFIN;Acc:ZDB-GENE-030131-3724]
94. mbtps1 ENSDARG00000014634, ENSDARG00000109507, ENSDARG00000110774 2290 0.996 - - 0.996 - - - - - - membrane-bound transcription factor peptidase, site 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4909]
95. CABZ01013938.1 CABZ01013938.1 4497 0.996 - - 0.996 - - - - - -
96. fosl2 ENSDARG00000040623 2041 0.996 - - 0.996 - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]
97. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.996 - - 0.996 - - - - - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
98. pip5k1aa ENSDARG00000100396 1644 0.996 - - 0.996 - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
99. dhx38 ENSDARG00000100013 1854 0.996 - - 0.996 - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
100. hug 4100 0.995 - - 0.995 - - - - - - HuG, transcript variant X2

There are 1470 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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