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Results for usp42

Gene Name Gene ID Reads Annotation
usp42 ENSDARG00000077300 926 ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]










Genes with expression patterns similar to usp42

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp42 ENSDARG00000077300 926 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
2. lppr3a lppr3a 1294 2.356 - 0.709 - 0.877 - - - - 0.770
3. aftpha ENSDARG00000069249 867 2.341 - - - 0.834 - 0.779 0.728 - - aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
4. sephs1 ENSDARG00000058292 3347 2.31 - - - 0.844 - 0.764 - - 0.702 selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
5. creb1a ENSDARG00000053586 5068 2.3 - 0.757 - - - - 0.813 - 0.730 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
6. si:ch211-113e8.11 ENSDARG00000076585 721 2.261 - - - 0.771 - 0.701 0.789 - - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
7. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.684 - - - 0.870 - - 0.814 - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
8. gpm6bb ENSDARG00000001676 2005 1.682 - - - 0.889 - - 0.793 - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
9. marcksa ENSDARG00000004049 2518 1.655 - - - 0.891 - - - - 0.764 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
10. ercc3 ENSDARG00000002402 340 1.648 - - - 0.864 - - - - 0.784 excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
11. suv420h2 2186 1.642 - - - 0.901 - - 0.741 - - suppressor of variegation 4-20 homolog 2 (Drosophila)
12. ENSDARG00000058760 ENSDARG00000058760 1076 1.638 - - - 0.854 - - 0.784 - -
13. gipc1 ENSDARG00000104483 2913 1.637 - 0.725 - 0.912 - - - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
14. taf1 ENSDARG00000035330 912 1.629 - 0.805 - 0.824 - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
15. LDLRAD4 LDLRAD4 1237 1.612 - - - 0.838 - - - - 0.774
16. hoxc6b ENSDARG00000101954 967 1.611 - 0.802 - - - - 0.809 - - homeobox C6b [Source:ZFIN;Acc:ZDB-GENE-000822-1]
17. ccnh ENSDARG00000007657 745 1.609 - 0.729 - 0.880 - - - - - cyclin H [Source:ZFIN;Acc:ZDB-GENE-050320-13]
18. tmem104 ENSDARG00000088560 859 1.608 - 0.763 - 0.845 - - - - - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
19. klc2 3058 1.599 - - - 0.791 - 0.808 - - - kinesin light chain 2
20. sin3ab ENSDARG00000059812 2140 1.596 - - - 0.741 - - 0.855 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
21. garem ENSDARG00000017242 912 1.594 - 0.748 - - - - 0.846 - - GRB2 associated, regulator of MAPK1 [Source:ZFIN;Acc:ZDB-GENE-040426-767]
22. aatf ENSDARG00000025467, ENSDARG00000109548 796 1.59 - 0.809 - - - - 0.781 - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
23. CABIN1 ENSDARG00000079326 905 1.59 - - - 0.854 - 0.736 - - - calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
24. ube2w ENSDARG00000044923 438 1.589 0.782 - - - - - 0.807 - - ubiquitin-conjugating enzyme E2W (putative) [Source:ZFIN;Acc:ZDB-GENE-050506-94]
25. sgce ENSDARG00000012138 912 1.586 - - - 0.875 - 0.711 - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
26. SPTBN4_1 ENSDARG00000092624 473 1.581 - - - 0.866 - - - - 0.715 spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
27. znf395b ENSDARG00000024195 342 1.573 - - - 0.749 - 0.824 - - - zinc finger protein 395b [Source:ZFIN;Acc:ZDB-GENE-041001-193]
28. mdkb ENSDARG00000020708 5393 1.569 - - - 0.853 - - 0.716 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
29. ppp1r11 ENSDARG00000036063 587 1.565 0.750 - - - - - 0.815 - - protein phosphatase 1, regulatory (inhibitor) subunit 11 [Source:ZFIN;Acc:ZDB-GENE-050417-99]
30. hif1an ENSDARG00000031915 2098 1.558 - - - 0.836 - - - - 0.722 hypoxia inducible factor 1 subunit alpha inhibitor [Source:ZFIN;Acc:ZDB-GENE-030826-19]
31. armc1l ENSDARG00000020887 1219 1.557 - - - 0.852 - - - - 0.705 armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
32. hmga1b ENSDARG00000070951 377 1.555 - - - - - - 0.784 0.771 - high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
33. tdrd3 ENSDARG00000025421 633 1.555 - - - 0.843 - - - 0.712 - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
34. ccne2 ENSDARG00000098529 4695 1.552 - - - - - 0.721 0.831 - - cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
35. ssb ENSDARG00000029252 3394 1.55 0.771 0.779 - - - - - - - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
36. nfil3-2 658 1.545 0.700 - - 0.845 - - - - - nuclear factor, interleukin 3 regulated, member 2, transcript variant X1
37. smn1 ENSDARG00000018494 1024 1.544 0.756 - - 0.788 - - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
38. kif5bb 1645 1.543 - - - - - - 0.828 - 0.715 kinesin family member 5B, b
39. plxna3 ENSDARG00000007172 1412 1.536 - - - 0.763 - - 0.773 - - plexin A3 [Source:ZFIN;Acc:ZDB-GENE-070613-1]
40. HOOK2 ENSDARG00000039309, ENSDARG00000099235 812 1.534 0.744 - - - - - 0.790 - - hook microtubule-tethering protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1636]
41. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 1.534 - 0.776 - - - 0.758 - - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
42. TBC1D24 ENSDARG00000069339 1300 1.531 - - - 0.763 - - 0.768 - - TBC1 domain family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050809-65]
43. prrc2c ENSDARG00000057583, ENSDARG00000116399 1673 1.531 0.803 - - - - - - - 0.728 proline-rich coiled-coil 2C [Source:ZFIN;Acc:ZDB-GENE-081104-156]
44. CCNJL ENSDARG00000077116 1197 1.529 - - - 0.772 - - - - 0.757 cyclin J-like [Source:ZFIN;Acc:ZDB-GENE-030131-9888]
45. TMEM185A TMEM185A 5505 1.529 - 0.725 - 0.804 - - - - -
46. RANBP2 ENSDARG00000093125 1854 1.523 - 0.772 - 0.751 - - - - - RAN binding protein 2 [Source:HGNC Symbol;Acc:HGNC:9848]
47. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.512 - - 0.772 - - - - 0.740 - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
48. fezf2 ENSDARG00000070677 224 1.511 - - - 0.771 - - - 0.740 - FEZ family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-001103-3]
49. pnkd ENSDARG00000071032 447 1.497 - 0.727 - 0.770 - - - - - PNKD, MBL domain containing [Source:ZFIN;Acc:ZDB-GENE-050208-278]
50. paip2b ENSDARG00000008706 4255 1.492 - 0.715 - - - - 0.777 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
51. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 1.49 - - - 0.775 - - - - 0.715 POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
52. nin ENSDARG00000060298 1558 1.489 - - - - - - - 0.713 0.776 ninein (GSK3B interacting protein) [Source:ZFIN;Acc:ZDB-GENE-070725-1]
53. mrpl44 ENSDARG00000094277 1778 1.483 - 0.711 - 0.772 - - - - - mitochondrial ribosomal protein L44 [Source:ZFIN;Acc:ZDB-GENE-050913-59]
54. ldb1a ENSDARG00000010137 3035 1.482 - - - 0.745 - - - - 0.737 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
55. DACT3_1 DACT3_1 1235 1.477 - - - - - - 0.714 - 0.763
56. dio3b ENSDARG00000095767 521 1.477 - 0.724 - 0.753 - - - - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
57. cenpk ENSDARG00000039616 744 1.469 - - - - - - 0.753 0.716 - centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
58. tfdp1a ENSDARG00000019293, ENSDARG00000111589 1118 1.467 - 0.741 - 0.726 - - - - - transcription factor Dp-1, a [Source:ZFIN;Acc:ZDB-GENE-040426-2883]
59. rfc1 ENSDARG00000054799 1416 1.466 - - - - - 0.703 0.763 - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
60. C21H5orf24 C21H5orf24 333 1.464 - - - - - - - 0.763 0.701
61. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 1.463 - 0.703 - - - - - - 0.760 ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
62. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.462 - 0.720 - - - - - - 0.742 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
63. dnaja2l ENSDARG00000010745 2367 1.459 - - - - - - 0.729 - 0.730 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
64. LPHN2 LPHN2 1971 1.457 - - - 0.755 - - - - 0.702
65. rbpjb ENSDARG00000052091 3122 1.456 - 0.753 - - - - - - 0.703 recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
66. tnrc5 412 1.455 - 0.748 - - - - - 0.707 - trinucleotide repeat containing 5
67. mynn ENSDARG00000007271 991 1.455 - - - - - 0.708 0.747 - - myoneurin [Source:ZFIN;Acc:ZDB-GENE-030131-5378]
68. TAF15 ENSDARG00000070019 5102 1.455 - - 0.718 - - - - - 0.737 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
69. VPS37B_1 VPS37B_1 1816 1.454 - 0.719 - 0.735 - - - - -
70. kifap3a ENSDARG00000008639 721 1.448 - - - 0.735 - - - 0.713 - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
71. nup93 ENSDARG00000003487, ENSDARG00000111433 2474 1.448 - - 0.714 - - 0.734 - - - nucleoporin 93 [Source:ZFIN;Acc:ZDB-GENE-990415-46]
72. cdk12 ENSDARG00000063726 1220 1.444 - - - - - - - 0.729 0.715 cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
73. kdm5c ENSDARG00000006124 4389 1.443 - 0.701 - - - - 0.742 - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
74. golga7ba ENSDARG00000036295 1460 1.439 - - - 0.720 - - - - 0.719 golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
75. chrac1 ENSDARG00000042337 2590 1.437 - - - 0.736 - - - - 0.701 chromatin accessibility complex 1 [Source:ZFIN;Acc:ZDB-GENE-050227-18]
76. THEG ENSDARG00000078644 121 1.435 - 0.733 - - - - 0.702 - - theg spermatid protein [Source:ZFIN;Acc:ZDB-GENE-070912-59]
77. GK2 GK2 813 1.435 - 0.708 - - - - 0.727 - -
78. RNF4 ENSDARG00000090993 688 1.433 - - - 0.704 - - 0.729 - - ring finger protein 4 [Source:ZFIN;Acc:ZDB-GENE-041008-246]
79. cpsf5 cpsf5 1841 1.432 - - - - - - - 0.718 0.714
80. psmd1 ENSDARG00000003189 4373 1.43 - - 0.721 - - - 0.709 - - proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
81. dpysl3 ENSDARG00000002587 4381 1.43 - 0.714 - - - - - - 0.716 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
82. wu:fb30e12 wu:fb30e12 1254 1.427 - - - 0.712 - - - - 0.715
83. si:dkey-117m1.4 ENSDARG00000093120 1666 1.427 - - - 0.714 - - 0.713 - - si:dkey-117m1.4 [Source:ZFIN;Acc:ZDB-GENE-090313-177]
84. celf3a ENSDARG00000034668 2432 1.422 - - - - - - 0.709 - 0.713 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
85. gdi1 ENSDARG00000056122 4106 1.422 - - - - - 0.710 0.712 - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
86. gpatch2 1221 1.419 - 0.717 - - - - 0.702 - - G patch domain containing 2, transcript variant X1
87. tbl1xr1b ENSDARG00000008966 2203 1.415 - - - - - - 0.701 - 0.714 transducin (beta)-like 1 X-linked receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1192]
88. anapc7 ENSDARG00000063005 1139 0.918 - - - 0.918 - - - - - anaphase promoting complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-081104-113]
89. DHX32 DHX32 181 0.918 - - - 0.918 - - - - -
90. dcp1a ENSDARG00000100136 714 0.917 - - - 0.917 - - - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
91. wdhd1 ENSDARG00000015998 775 0.91 - - - 0.910 - - - - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
92. FBXL3 FBXL3 1769 0.906 - - - 0.906 - - - - -
93. plagx ENSDARG00000036855 3768 0.897 - - - 0.897 - - - - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
94. noc4l ENSDARG00000045565 1337 0.896 - - - 0.896 - - - - - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
95. phf10 ENSDARG00000070084 1210 0.893 - - - 0.893 - - - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
96. rybpa ENSDARG00000037773 904 0.892 - - - 0.892 - - - - - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
97. creb1b ENSDARG00000093420 524 0.891 - - - 0.891 - - - - - cAMP responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-355]
98. C1H10orf12 C1H10orf12 1663 0.889 - - - 0.889 - - - - -
99. orc3 ENSDARG00000008805 444 0.888 - - - 0.888 - - - - - origin recognition complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6247]
100. kmt2bb ENSDARG00000060697 5230 0.888 - - - 0.888 - - - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]

There are 1304 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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