Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for usp30

Gene Name Gene ID Reads Annotation
usp30 ENSDARG00000056842 178 ubiquitin specific peptidase 30 [Source:ZFIN;Acc:ZDB-GENE-060526-335]










Genes with expression patterns similar to usp30

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp30 ENSDARG00000056842 178 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 30 [Source:ZFIN;Acc:ZDB-GENE-060526-335]
2. RCVRN RCVRN 66 2.559 0.930 0.737 - - - - 0.892 - -
3. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 2.468 0.817 0.717 - - - - - 0.934 - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
4. bik ENSDARG00000045549 18 1.748 0.938 - - - - - 0.810 - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
5. vstm4a ENSDARG00000010154 129 1.741 0.941 0.800 - - - - - - - V-set and transmembrane domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-060810-69]
6. tsen2 ENSDARG00000091851 1467 1.713 0.783 - - - - - - 0.930 - TSEN2 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-060929-918]
7. vhl ENSDARG00000070617 663 1.696 0.833 - - - - - 0.863 - - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
8. CU929036.1 CU929036.1 7 1.675 0.938 0.737 - - - - - - -
9. nlrx1 ENSDARG00000073724 286 1.66 0.825 0.835 - - - - - - - NLR family member X1 [Source:ZFIN;Acc:ZDB-GENE-071119-3]
10. alox5ap ENSDARG00000054755, ENSDARG00000113460 52 1.652 0.947 - - - - 0.705 - - - arachidonate 5-lipoxygenase-activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-9322]
11. CABZ01069022.1 ENSDARG00000105692 16 1.648 0.911 0.737 - - - - - - - si:cabz01069022.1 [Source:NCBI gene;Acc:100332864]
12. CT956064.4 CT956064.4 541 1.642 - 0.766 - - - - - 0.876 -
13. atxn7l2b ENSDARG00000056268 226 1.641 0.734 - - - - 0.907 - - - ataxin 7-like 2b [Source:ZFIN;Acc:ZDB-GENE-040718-403]
14. si:dkey-78o7.6 si:dkey-78o7.6 137 1.626 - 0.904 - - - 0.722 - - -
15. fam86a fam86a 174 1.611 - 0.737 - - - - 0.874 - -
16. METTL9 ENSDARG00000060001 262 1.599 - - - - - - 0.739 0.860 - methyltransferase like 9 [Source:ZFIN;Acc:ZDB-GENE-061013-752]
17. skilb ENSDARG00000022904 300 1.582 - 0.700 - - - - - 0.882 - SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
18. mir34 176 1.579 0.875 0.704 - - - - - - - microRNA 34
19. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.577 - 0.829 - - - - 0.748 - - phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
20. bfb ENSDARG00000005616, ENSDARG00000110364 30 1.567 - 0.819 - - - - 0.748 - - complement component bfb [Source:ZFIN;Acc:ZDB-GENE-990415-34]
21. apaf1 ENSDARG00000021239 1185 1.549 - 0.710 - - - - - 0.839 - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
22. ino80e ENSDARG00000022939, ENSDARG00000101892 216 1.548 0.740 - - - - 0.808 - - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
23. cryba2a ENSDARG00000030349 1342 1.547 - 0.737 - - - - 0.810 - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
24. pycrl pycrl 80 1.547 - - - - - 0.732 0.815 - -
25. SERTAD4 ENSDARG00000089795 791 1.542 - - - - - - 0.815 0.727 - SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
26. traf4b ENSDARG00000038964 346 1.53 0.796 - - - - - 0.734 - - tnf receptor-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-040305-2]
27. slc22a5 ENSDARG00000101021 20 1.528 - - - - - 0.718 0.810 - - solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-091012-1]
28. C22H19orf60 C22H19orf60 221 1.523 - 0.763 - - - - 0.760 - -
29. mark3 mark3 1375 1.523 - - - - - - 0.713 0.810 -
30. CCNJ ENSDARG00000059917 115 1.512 - - - - - 0.718 0.794 - - cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
31. xkr8.2 ENSDARG00000076820 51 1.492 - - - - - 0.718 0.774 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
32. med19b ENSDARG00000009472 936 1.488 0.759 - - - 0.729 - - - - mediator complex subunit 19b [Source:ZFIN;Acc:ZDB-GENE-040727-4]
33. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.487 0.729 - - - - - 0.758 - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
34. ptpn22 ENSDARG00000104197 266 1.486 - 0.724 - - - 0.762 - - - protein tyrosine phosphatase, non-receptor type 22 [Source:ZFIN;Acc:ZDB-GENE-060503-458]
35. si:ch211-209j10.6 ENSDARG00000093317 126 1.472 0.752 0.720 - - - - - - - si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
36. TTC37 ENSDARG00000074314 356 1.444 - - - 0.719 - - 0.725 - - tetratricopeptide repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-110125-2]
37. si:dkey-29n10.3 si:dkey-29n10.3 66 1.424 0.704 - - - - - 0.720 - -
38. znf687a ENSDARG00000102774 393 1.411 0.711 0.700 - - - - - - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
39. arih1l ENSDARG00000036870, ENSDARG00000112965 82 0.989 0.989 - - - - - - - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]
40. CABZ01054962.1 CABZ01054962.1 91 0.989 0.989 - - - - - - - -
41. ZNF784_4 ZNF784_4 113 0.987 - 0.987 - - - - - - -
42. TATDN1 ENSDARG00000036924 246 0.984 - - - - - - - 0.984 - TatD DNase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-56]
43. ubn2 ubn2 534 0.978 - - - - - - - 0.978 -
44. tnip1 ENSDARG00000015653 94 0.974 0.974 - - - - - - - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
45. C22H19orf44 C22H19orf44 481 0.962 - - - - - - - 0.962 -
46. bcs1l ENSDARG00000012295 664 0.962 - - - - - - - 0.962 - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
47. zgc:136474 zgc:136474 658 0.959 - - - - - - - 0.959 -
48. CR847543.1 ENSDARG00000086708 155 0.959 - - - - - - - 0.959 -
49. npb ENSDARG00000078828 230 0.959 - - - - - - - 0.959 - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
50. DHRS7C DHRS7C 363 0.956 - - - - - - - 0.956 -
51. dpf2 ENSDARG00000012219 666 0.956 - - - - - - - 0.956 - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
52. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 0.956 - - - - - - - 0.956 - SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
53. ROBO3_1 ROBO3_1 468 0.954 - - - - - - - 0.954 -
54. ADCYAP1R1 ADCYAP1R1 118 0.953 - - - - - - - 0.953 -
55. BX890577.1 BX890577.1 257 0.953 - - - - - 0.953 - - -
56. si:dkeyp-87d1.1 ENSDARG00000104681 35 0.952 - - - - - - - 0.952 - si:dkeyp-87d1.1 [Source:ZFIN;Acc:ZDB-GENE-041014-75]
57. si:dkey-242e21.3 ENSDARG00000075723 77 0.952 - - - - - - - 0.952 - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
58. si:ch211-173p18.3_1 ENSDARG00000035821 36 0.952 - - - - - - - 0.952 - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
59. dnase1 ENSDARG00000012539 65 0.952 - - - - - - - 0.952 - deoxyribonuclease I [Source:ZFIN;Acc:ZDB-GENE-040718-423]
60. CR388228.1 ENSDARG00000117809 31 0.952 - - - - - - - 0.952 - uncharacterized LOC110437756 [Source:NCBI gene;Acc:110437756]
61. si:dkey-9i5.1 si:dkey-9i5.1 36 0.952 - - - - - - - 0.952 -
62. si:dkey-10c21.1 ENSDARG00000079133 32 0.952 - - - - - - - 0.952 - si:dkey-10c21.1 [Source:ZFIN;Acc:ZDB-GENE-081104-302]
63. MSH4 ENSDARG00000075826 37 0.952 - - - - - - - 0.952 - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
64. GIPR ENSDARG00000025478 87 0.952 - - - - - - - 0.952 - gastric inhibitory polypeptide receptor [Source:ZFIN;Acc:ZDB-GENE-050516-4]
65. si:ch211-218m3.16 ENSDARG00000044336 33 0.952 - - - - - - - 0.952 - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
66. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 0.952 - - - - - - - 0.952 -
67. fancg ENSDARG00000024967, ENSDARG00000113462 82 0.952 - - - - - - - 0.952 - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
68. meiob 75 0.951 - - - - - - - 0.951 - meiosis specific with OB domains
69. myd88 ENSDARG00000010169 86 0.951 0.951 - - - - - - - - myeloid differentiation primary response 88 [Source:ZFIN;Acc:ZDB-GENE-040219-3]
70. si:dkey-11f4.20 ENSDARG00000100887 38 0.951 - - - - - - - 0.951 - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
71. CABZ01088365.1 CABZ01088365.1 66 0.951 - - - - - - - 0.951 -
72. ccdc41 ccdc41 97 0.951 - - - - - - - 0.951 -
73. zpcx ENSDARG00000059252, ENSDARG00000111002 33 0.951 - - - - - - - 0.951 - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
74. zgc:153292 ENSDARG00000070458, ENSDARG00000112223 134 0.95 - - - - - - - 0.950 - zgc:153292 [Source:ZFIN;Acc:ZDB-GENE-060929-1098]
75. htr3b ENSDARG00000061749 49 0.95 - - - - - - - 0.950 - 5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]
76. CR848025.1 ENSDARG00000100501 35 0.95 - - - - - - - 0.950 - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
77. si:ch211-233h19.2 ENSDARG00000042213 47 0.95 - - - - - - - 0.950 - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
78. nitr3a_1 ENSDARG00000110676 44 0.949 - - - - - - - 0.949 - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
79. rad9a ENSDARG00000056984, ENSDARG00000115514 152 0.949 - - - - - - - 0.949 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
80. si:ch211-193e13.5 ENSDARG00000052656 61 0.949 - - - - - - - 0.949 - si:ch211-193e13.5 [Source:ZFIN;Acc:ZDB-GENE-081104-158]
81. pigm ENSDARG00000024277 86 0.948 - - - - - - - 0.948 - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
82. nmu ENSDARG00000043299 67 0.948 - - - - - - - 0.948 - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
83. kcnk9 ENSDARG00000104563 92 0.947 - - - - - - - 0.947 - potassium channel, subfamily K, member 9 [Source:ZFIN;Acc:ZDB-GENE-070705-260]
84. mecr ENSDARG00000032326 314 0.947 - - - - - - - 0.947 - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
85. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.947 - - - - - - - 0.947 - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
86. tvp23b ENSDARG00000057060 361 0.947 - - - - - - - 0.947 - trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-404]
87. plekho1b ENSDARG00000077499 21 0.947 0.947 - - - - - - - - pleckstrin homology domain containing, family O member 1b [Source:ZFIN;Acc:ZDB-GENE-100609-2]
88. zgc:165582 ENSDARG00000074362 198 0.947 0.947 - - - - - - - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
89. FGD5 FGD5 250 0.947 - - - - - - - 0.947 -
90. scamp1 ENSDARG00000036911 103 0.947 0.947 - - - - - - - - secretory carrier membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1803]
91. TRIM67 ENSDARG00000108787 290 0.946 - - - - - - - 0.946 - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
92. fbxl20 ENSDARG00000075567 138 0.946 - - - - - - - 0.946 - F-box and leucine-rich repeat protein 20 [Source:ZFIN;Acc:ZDB-GENE-081031-27]
93. FP102801.1_1 FP102801.1_1 238 0.946 - - - - - - - 0.946 -
94. CABZ01032488.1 ENSDARG00000099154 262 0.946 - - - - - - - 0.946 - wu:fb14d09 [Source:NCBI gene;Acc:100536795]
95. gosr2 ENSDARG00000053070 944 0.945 - - - - - - - 0.945 - golgi SNAP receptor complex member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3290]
96. ZNF76 ENSDARG00000013279 260 0.945 - - - - - - - 0.945 - zinc finger protein 76 [Source:ZFIN;Acc:ZDB-GENE-061027-379]
97. rxfp2b ENSDARG00000019660 464 0.944 - - - - - - - 0.944 - relaxin family peptide receptor 2b [Source:ZFIN;Acc:ZDB-GENE-110408-27]
98. camk1da ENSDARG00000074905, ENSDARG00000111604 479 0.944 - - - - - - - 0.944 - calcium/calmodulin-dependent protein kinase 1Da [Source:ZFIN;Acc:ZDB-GENE-080402-7]
99. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 0.944 - - - - - - - 0.944 - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
100. CABZ01041962.1 ENSDARG00000076082 690 0.944 - - - - - - - 0.944 - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]

There are 1154 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA