Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for usp2a

Gene Name Gene ID Reads Annotation
usp2a ENSDARG00000020107 2586 ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]










Genes with expression patterns similar to usp2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp2a ENSDARG00000020107 2586 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 2a [Source:ZFIN;Acc:ZDB-GENE-041212-59]
2. jph2 ENSDARG00000028625 6706 4.078 0.798 0.833 - - 0.790 - 0.940 - 0.717 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
3. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 3.281 0.781 - - - - 0.844 0.942 - 0.714 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
4. myod1 ENSDARG00000030110 6019 3.264 0.841 - - - - 0.765 0.940 - 0.718 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
5. nexn ENSDARG00000057317 10972 3.257 0.790 - - - - 0.803 0.932 - 0.732 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
6. rtn2a ENSDARG00000016088 12184 3.251 0.742 0.823 - - 0.748 - 0.938 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
7. TRIM63 TRIM63 1600 3.216 0.739 - - - 0.701 0.842 0.934 - -
8. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.183 0.735 - - - 0.752 - 0.943 - 0.753 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
9. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 3.179 0.833 - - - - 0.701 0.911 - 0.734 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
10. mdh1b ENSDARG00000018008 3196 3.17 0.728 - - - - 0.791 0.945 - 0.706 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
11. txlnbb ENSDARG00000076241 6396 3.155 0.827 - - - 0.704 0.727 0.897 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
12. mafa ENSDARG00000015890 2140 3.148 0.775 - - - - 0.726 0.933 - 0.714 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog a (paralog a) [Source:ZFIN;Acc:ZDB-GENE-010605-2]
13. tnnt2d ENSDARG00000002988 7590 3.131 0.797 - - - - 0.729 0.869 - 0.736 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
14. smyd2b ENSDARG00000005629 8181 3.06 0.735 - - - 0.749 0.857 - - 0.719 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
15. chchd3 chchd3 4139 3.039 0.775 - - 0.707 - 0.709 0.848 - -
16. SYNPO2 SYNPO2 7382 2.946 - - - - 0.706 0.701 0.713 - 0.826
17. gypc ENSDARG00000041546 1487 2.549 0.873 - - - - 0.787 0.889 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
18. klhl41b ENSDARG00000006757 10762 2.545 0.867 - - - - - 0.953 - 0.725 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
19. ppapdc3 ppapdc3 4924 2.537 0.880 - - - - 0.747 0.910 - -
20. chrna1 ENSDARG00000009021 2931 2.534 0.803 - - - - 0.818 0.913 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
21. sh3bgr ENSDARG00000021633 3498 2.53 0.802 - - - - 0.824 0.904 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
22. PTPLA PTPLA 4044 2.528 0.765 - - - - 0.832 0.931 - -
23. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.501 0.802 - - - - 0.775 0.924 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
24. znf648 ENSDARG00000104823 1918 2.487 0.796 - - - - 0.886 0.805 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
25. zgc:92518 ENSDARG00000016343 3837 2.486 0.807 - - - - 0.733 0.946 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
26. dnajc18 ENSDARG00000056005 8084 2.483 0.863 0.844 - - - - 0.776 - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
27. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 2.477 0.809 - - - - 0.796 0.872 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
28. sox6 ENSDARG00000015536 7728 2.473 0.769 - - - - 0.798 0.906 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
29. rp42-pen rp42-pen 3395 2.471 - - - - - 0.826 0.902 - 0.743
30. ahsa1 ahsa1 2012 2.466 0.840 - - - - 0.729 0.897 - -
31. parvb ENSDARG00000019117 1042 2.461 0.802 - - - - 0.773 0.886 - - parvin, beta [Source:ZFIN;Acc:ZDB-GENE-030131-4411]
32. agla ENSDARG00000103811 2856 2.455 - 0.843 - - - 0.705 0.907 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
33. si:ch211-242b18.1 ENSDARG00000054723 2929 2.455 0.782 - - - - 0.821 0.852 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
34. si:ch211-156j16.1 ENSDARG00000092035 7441 2.455 0.832 - - - - - 0.914 - 0.709 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
35. clic5a ENSDARG00000075993, ENSDARG00000115073 607 2.453 0.834 - - 0.796 - - 0.823 - - chloride intracellular channel 5a [Source:ZFIN;Acc:ZDB-GENE-041114-84]
36. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 2.452 0.705 - - - - 0.796 0.951 - - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
37. smyd2a ENSDARG00000055151 2505 2.452 0.852 - - - - 0.782 0.818 - - SET and MYND domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050320-126]
38. smtnl1 ENSDARG00000041257 7410 2.45 0.789 - - - - 0.765 0.896 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
39. CU633479.5 ENSDARG00000114818 1815 2.448 0.829 - - - - 0.766 0.853 - -
40. atp1b3b ENSDARG00000042837 5163 2.443 0.746 - - - - 0.807 0.890 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
41. sptb ENSDARG00000030490 7128 2.442 0.800 - - - - - 0.919 - 0.723 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
42. SCARF2 1117 2.441 0.805 0.844 0.792 - - - - - - scavenger receptor class F, member 2
43. NRAP ENSDARG00000009341 3565 2.438 0.782 - - - - 0.716 0.940 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
44. sgcd ENSDARG00000098573 4980 2.435 0.834 - - - - - 0.894 - 0.707 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
45. prkg1b ENSDARG00000031702 405 2.432 - - - - - 0.762 0.940 - 0.730 protein kinase cGMP-dependent 1b [Source:ZFIN;Acc:ZDB-GENE-080225-40]
46. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 2.427 - - 0.825 - - 0.746 0.856 - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
47. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.423 0.788 - - - - 0.797 0.838 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
48. CR847973.1 ENSDARG00000115516 8754 2.419 0.734 - - - - 0.746 0.939 - -
49. limch1a ENSDARG00000074275 2981 2.412 0.756 - - - - 0.736 0.920 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
50. slc6a8 ENSDARG00000043646 1114 2.411 0.784 - - 0.832 - - 0.795 - - solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]
51. MYOT ENSDARG00000076312 1791 2.41 0.788 - - - - - 0.919 - 0.703 myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
52. PTGES3L PTGES3L 4801 2.41 0.807 - - - - 0.723 0.880 - -
53. tgm2a ENSDARG00000070157 4516 2.41 0.815 - - - 0.703 - 0.892 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
54. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 2.409 0.879 - - - - 0.781 0.749 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
55. larsb ENSDARG00000019280 3924 2.397 - - 0.783 - - 0.785 0.829 - - leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
56. fbxw5 ENSDARG00000099139 2802 2.396 0.781 - 0.768 - - - 0.847 - - F-box and WD repeat domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2571]
57. smyd1a ENSDARG00000009280 1503 2.395 0.793 - - - - 0.704 0.898 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
58. mtdhb ENSDARG00000004939 1225 2.394 0.848 - - - - 0.763 0.783 - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
59. fbp2 ENSDARG00000012366 1042 2.394 0.740 - - - - 0.733 0.921 - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
60. ATP5J_2 ATP5J_2 2381 2.393 0.797 - - - - 0.713 0.883 - -
61. ryr3 ENSDARG00000071331 6795 2.393 0.729 - - - - 0.744 0.920 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
62. BX530018.3 ENSDARG00000107022 614 2.391 0.729 - - - - 0.762 0.900 - -
63. klhl40a ENSDARG00000039052 2537 2.391 0.743 - - - - 0.709 0.939 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
64. MUSTN1 MUSTN1 1882 2.388 0.747 - - - - 0.764 0.877 - -
65. txnipb ENSDARG00000070000 2365 2.387 0.707 - - - - 0.810 0.870 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
66. SPEG SPEG 4017 2.382 0.712 - - - 0.720 - 0.950 - -
67. myoz2a ENSDARG00000012311 1373 2.38 0.721 - - - - 0.771 0.888 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
68. MYOM3 2720 2.379 0.834 - - - - 0.701 0.844 - - myomesin 3, transcript variant X2
69. trdn ENSDARG00000041779 4283 2.379 0.760 - - - - - 0.912 - 0.707 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
70. murca murca 6614 2.376 0.787 - - 0.792 - 0.797 - - -
71. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 2.376 0.796 - - - - 0.745 0.835 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
72. ITGB1BP2 ENSDARG00000030176 2472 2.371 0.779 - - - - 0.709 0.883 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
73. SYNPO2L SYNPO2L 6697 2.366 0.776 - - - - 0.847 - - 0.743
74. cacng1 cacng1 3118 2.364 0.804 - - - - 0.739 0.821 - -
75. ntmt1 ENSDARG00000022399 5779 2.352 0.707 - - - - 0.823 0.822 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
76. egln1 egln1 3746 2.349 - - 0.798 - - 0.712 0.839 - -
77. BX324201.1 BX324201.1 3302 2.348 0.708 - - - - - 0.937 - 0.703
78. stac3 ENSDARG00000098883 1765 2.344 0.723 - - 0.748 - - 0.873 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
79. eif4e2 ENSDARG00000038585 2116 2.339 0.805 - - - - 0.788 0.746 - - eukaryotic translation initiation factor 4E family member 2 [Source:ZFIN;Acc:ZDB-GENE-050327-59]
80. zgc:158296 ENSDARG00000070923 3935 2.337 - - - - - 0.733 0.900 - 0.704 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
81. tnnt3a ENSDARG00000030270 112506 2.333 0.807 - - - - - 0.770 - 0.756 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
82. atp2a1 ENSDARG00000020574 291561 2.322 0.818 - - - 0.726 - 0.778 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
83. naa15a ENSDARG00000003213 5889 2.322 - - - 0.745 - 0.749 0.828 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
84. synpo2b ENSDARG00000077157 1009 2.317 - - - - - 0.704 0.897 - 0.716 synaptopodin 2b [Source:ZFIN;Acc:ZDB-GENE-101230-1]
85. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 2.315 0.790 - - - - 0.711 0.814 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
86. mibp2 ENSDARG00000101844 17444 2.313 0.773 - - - - 0.816 0.724 - - muscle-specific beta 1 integrin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031113-14]
87. C1QBP ENSDARG00000039887 11186 2.304 0.841 0.728 - - - - 0.735 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
88. cfl2 ENSDARG00000014106 8051 2.303 0.734 - - - 0.719 - 0.850 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
89. MYPN 404 2.295 0.775 - - - - 0.718 0.802 - - myopalladin, transcript variant X1
90. cyc1 ENSDARG00000038075 16699 2.294 0.719 - - - - 0.832 0.743 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
91. pcmt ENSDARG00000015201 5132 2.292 - - 0.743 - - - 0.847 - 0.702 protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
92. rsu1 ENSDARG00000102885 3604 2.283 - - 0.808 0.721 - 0.754 - - - Ras suppressor protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-518]
93. mdh2 ENSDARG00000043371 14485 2.281 0.724 - - - - - 0.856 - 0.701 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
94. tgm1l1 ENSDARG00000102106 1437 2.273 0.732 - - - - 0.823 0.718 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
95. tmem41ab ENSDARG00000026771, ENSDARG00000114061, ENSDARG00000116237 641 2.272 0.722 - - - - 0.721 0.829 - - transmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
96. aimp1 ENSDARG00000060036 5343 2.262 0.700 - - - - 0.711 0.851 - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
97. PTP4A3 ENSDARG00000039997 3814 2.251 0.770 - - - - 0.732 0.749 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
98. sdhdb ENSDARG00000030139 9761 2.237 0.744 - - - - 0.774 - - 0.719 succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
99. aldoab ENSDARG00000034470 88942 2.236 0.792 - - - 0.726 - 0.718 - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
100. mef2d ENSDARG00000040237 6144 2.219 0.750 - - - - 0.732 0.737 - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]

There are 1497 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA