Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp25

Gene Name Gene ID Reads Annotation
usp25 ENSDARG00000012314 734 ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]










Genes with expression patterns similar to usp25

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp25 ENSDARG00000012314 734 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]
2. srxn1 ENSDARG00000079160 265 2.484 - 0.844 - 0.758 - - 0.882 - - sulfiredoxin 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-091230-2]
3. si:dkeyp-106c3.1 ENSDARG00000090623 225 1.846 - - - - 0.938 - 0.908 - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
4. FP236789.2 FP236789.2 335 1.821 - - - - - - 0.960 0.861 -
5. il2rb ENSDARG00000075720 116 1.779 - - - - - - 0.896 0.883 - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
6. mgat5 ENSDARG00000071506 324 1.771 - - - - - - 0.862 0.909 - alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-060616-238]
7. KLHL29_1 KLHL29_1 158 1.771 - - - - - - 0.866 0.905 -
8. skia ENSDARG00000042151 1850 1.753 - - - 0.840 0.913 - - - - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
9. ftr67 ENSDARG00000098820 611 1.742 - - - 0.834 0.908 - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
10. rabgef1 ENSDARG00000014430 1176 1.719 - - - 0.796 0.923 - - - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
11. mgaa ENSDARG00000078784 1344 1.717 - - - - 0.913 - 0.804 - - MGA, MAX dimerization protein a [Source:ZFIN;Acc:ZDB-GENE-030603-1]
12. hcls1 ENSDARG00000012729 1547 1.701 - - - - 0.859 - 0.842 - - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
13. eif2ak2 ENSDARG00000068729 184 1.696 - - - - - - 0.813 0.883 - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
14. HAUS2 HAUS2 392 1.677 - - - - - - 0.906 0.771 -
15. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 1.668 - - - 0.741 - - 0.927 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
16. si:ch73-257c13.2 ENSDARG00000074305 197 1.667 - - - - - - 0.786 0.881 - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
17. arl11 ENSDARG00000036637 707 1.659 - - - - 0.869 - 0.790 - - ADP-ribosylation factor-like 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3410]
18. dis3l2 ENSDARG00000033259 1509 1.651 - - - - - - 0.793 0.858 - DIS3 like 3'-5' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-070705-171]
19. bdnf ENSDARG00000018817 193 1.649 - - - 0.820 - - - 0.829 - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
20. wdr83 ENSDARG00000041600, ENSDARG00000115089 253 1.644 - - - 0.785 - - 0.859 - - WD repeat domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-040718-126]
21. naglu ENSDARG00000030156 378 1.644 - - - 0.753 - - - 0.891 - N-acetylglucosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-100726-2]
22. tab1 ENSDARG00000036613 445 1.636 - - - - - - 0.828 0.808 - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
23. CLSPN 2054 1.636 - - - - 0.878 - - 0.758 - claspin
24. ednrab ENSDARG00000062262 565 1.635 - - - 0.720 0.915 - - - - endothelin receptor type Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2364]
25. ptgdsa ENSDARG00000069439, ENSDARG00000109669 289 1.628 - - - 0.745 - - 0.883 - - prostaglandin D2 synthase a [Source:ZFIN;Acc:ZDB-GENE-081022-118]
26. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 1.621 - - - 0.754 0.867 - - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
27. unga ENSDARG00000042527 1169 1.603 - - - - 0.795 0.808 - - - uracil DNA glycosylase a [Source:ZFIN;Acc:ZDB-GENE-040426-900]
28. trmt10c ENSDARG00000041575 447 1.599 - - - - 0.897 - 0.702 - - tRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:ZFIN;Acc:ZDB-GENE-041114-12]
29. CR293532.1 ENSDARG00000115628 204 1.598 - - - 0.728 - - - 0.870 -
30. agtpbp1 ENSDARG00000105214 1038 1.59 - - - 0.736 - - - 0.854 - ATP/GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-267]
31. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 1.582 - - - 0.774 - - 0.808 - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
32. tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 1.581 - - - - 0.831 - - 0.750 - tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]
33. si:ch211-251f6.6 ENSDARG00000053448 323 1.58 - - - - - 0.725 - 0.855 - si:ch211-251f6.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3219]
34. mid1ip1l ENSDARG00000018145 2789 1.579 - - - - 0.866 - - 0.713 - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
35. SNORD27 SNORD27 181 1.572 - - - 0.766 - - - 0.806 -
36. hpcal4 ENSDARG00000070491 365 1.571 0.704 - - - - - - 0.867 - hippocalcin like 4 [Source:ZFIN;Acc:ZDB-GENE-060503-307]
37. znf236 ENSDARG00000095890 410 1.567 - 0.809 - 0.758 - - - - - zinc finger protein 236 [Source:ZFIN;Acc:ZDB-GENE-041111-195]
38. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.555 - - - 0.781 0.774 - - - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
39. acot9.1 ENSDARG00000058352, ENSDARG00000114328 489 1.552 - 0.725 - - - - - 0.827 - acyl-CoA thioesterase 9, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-139]
40. nup133 ENSDARG00000010078 2373 1.552 - - - - 0.711 - - 0.841 - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
41. colec12 ENSDARG00000061140 1323 1.546 - 0.709 - 0.837 - - - - - collectin sub-family member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9807]
42. ddx31 ENSDARG00000035507 167 1.54 - - - 0.811 - 0.729 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
43. SLC29A2 ENSDARG00000001767, ENSDARG00000115816 1392 1.533 - 0.734 - 0.799 - - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
44. CABZ01080568.2 CABZ01080568.2 2137 1.529 0.745 - - - 0.784 - - - -
45. CDH26 CDH26 938 1.523 - - - 0.756 - - - 0.767 -
46. rab6bb ENSDARG00000031343 1381 1.521 - 0.729 - 0.792 - - - - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
47. mecr ENSDARG00000032326 314 1.512 - - - 0.776 - - 0.736 - - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
48. slc17a9b ENSDARG00000011049 231 1.51 - 0.713 - 0.797 - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
49. mark4a ENSDARG00000023914, ENSDARG00000112220 445 1.509 - - - 0.774 - - - 0.735 - MAP/microtubule affinity-regulating kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060531-156]
50. tmem184c ENSDARG00000078789, ENSDARG00000111570 395 1.505 - - - 0.779 - 0.726 - - - transmembrane protein 184C [Source:ZFIN;Acc:ZDB-GENE-090312-89]
51. mff ENSDARG00000053753 905 1.498 - - - 0.738 - - - 0.760 - mitochondrial fission factor [Source:ZFIN;Acc:ZDB-GENE-040426-1510]
52. pgm2 ENSDARG00000018178 985 1.497 - - - 0.779 - - 0.718 - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
53. eftud2 ENSDARG00000012261 3081 1.495 - 0.793 - - 0.702 - - - - elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
54. sema6a ENSDARG00000102165 1401 1.494 - 0.767 - - - - - 0.727 - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:ZFIN;Acc:ZDB-GENE-030131-8004]
55. faf2 ENSDARG00000052374 1351 1.482 - - - 0.719 0.763 - - - - Fas associated factor family member 2 [Source:ZFIN;Acc:ZDB-GENE-050208-312]
56. tmem63bb ENSDARG00000106631 503 1.478 - - - - - - 0.703 0.775 - transmembrane protein 63Bb [Source:NCBI gene;Acc:569678]
57. si:dkey-16p19.5 ENSDARG00000092583 284 1.472 - - - - - 0.713 0.759 - - si:dkey-16p19.5 [Source:ZFIN;Acc:ZDB-GENE-120709-69]
58. tasp1 ENSDARG00000060580 453 1.471 - - - - - - 0.708 0.763 - taspase, threonine aspartase, 1 [Source:ZFIN;Acc:ZDB-GENE-070424-242]
59. irs2 irs2 392 1.464 - 0.733 - - - - 0.731 - -
60. flcn ENSDARG00000062385, ENSDARG00000116055 614 1.462 - - - 0.752 - - 0.710 - - folliculin [Source:ZFIN;Acc:ZDB-GENE-060421-3470]
61. SORCS2 ENSDARG00000077465 185 1.46 - 0.735 - - - - 0.725 - - sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
62. arid2 ENSDARG00000007413 4413 1.459 - 0.735 - - 0.724 - - - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
63. usb1 ENSDARG00000003841 524 1.451 - - - 0.745 - - - 0.706 - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
64. mmp14a ENSDARG00000002235 911 1.447 0.743 - - - - - 0.704 - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
65. LRCH1 ENSDARG00000078778 407 1.446 - 0.722 - 0.724 - - - - - leucine-rich repeats and calponin homology (CH) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1783]
66. nme4 ENSDARG00000088390 87 1.443 - - - - - 0.712 0.731 - - NME/NM23 nucleoside diphosphate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1043]
67. nupr1 6040 1.443 - - - 0.729 - 0.714 - - - nuclear protein 1
68. acvr1b acvr1b 2963 1.424 - - - 0.705 - - 0.719 - -
69. anxa13l ENSDARG00000013613 631 0.969 - - - - 0.969 - - - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
70. JPH3 ENSDARG00000102204 283 0.964 - - - - 0.964 - - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
71. cbx4 ENSDARG00000099441 372 0.961 - - - - 0.961 - - - - chromobox homolog 4 (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040329-2]
72. paqr3b ENSDARG00000044253, ENSDARG00000110049 381 0.956 - - - - - - 0.956 - - progestin and adipoQ receptor family member IIIb [Source:ZFIN;Acc:ZDB-GENE-050913-128]
73. LPL_1 LPL_1 1150 0.956 - - - - 0.956 - - - -
74. si:ch73-280o22.2 ENSDARG00000077072 67 0.949 - - - - - - 0.949 - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
75. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 0.948 - - - - 0.948 - - - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
76. C16H8orf76 C16H8orf76 329 0.947 - - - - - - 0.947 - -
77. CU929133.1 CU929133.1 94 0.946 - - - - - - 0.946 - -
78. zgc:103438 ENSDARG00000035663 46 0.945 - - - - - - 0.945 - - zgc:103438 [Source:ZFIN;Acc:ZDB-GENE-041010-131]
79. fopnl ENSDARG00000071198 1002 0.945 - - - - - - 0.945 - - fgfr1op N-terminal like [Source:ZFIN;Acc:ZDB-GENE-101124-1]
80. cx32.2 ENSDARG00000076789 23 0.945 - - - - - - 0.945 - - connexin 32.2 [Source:ZFIN;Acc:ZDB-GENE-050303-1]
81. si:ch73-138e16.8 175 0.944 - - - - - - 0.944 - - si:ch73-138e16.8
82. utp23 ENSDARG00000105012 1346 0.943 - - - - 0.943 - - - - UTP23, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-353]
83. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 0.941 - - - - - - 0.941 - -
84. KEL ENSDARG00000076950 159 0.94 - - - - 0.940 - - - - Kell metallo-endopeptidase (Kell blood group) [Source:ZFIN;Acc:ZDB-GENE-110411-118]
85. cwf19l2 ENSDARG00000091760 1372 0.94 - - - - 0.940 - - - - CWF19-like 2, cell cycle control (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050913-1]
86. mycla ENSDARG00000006003 1866 0.94 - - - - 0.940 - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
87. tmem230a ENSDARG00000027687, ENSDARG00000109832 333 0.939 - - - - 0.939 - - - - transmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
88. htra1b ENSDARG00000014907 146 0.939 - - - - - - 0.939 - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
89. cxxc1 cxxc1 914 0.939 - - - - 0.939 - - - -
90. mis18a ENSDARG00000035333 555 0.938 - - - - 0.938 - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
91. si:dkey-20l4.2 si:dkey-20l4.2 110 0.938 - - - - 0.938 - - - -
92. si:ch73-234b20.4 112 0.938 - - - - - - 0.938 - - si:ch73-234b20.4, transcript variant X1
93. PEG3_22 PEG3_22 33 0.937 - - - - - - 0.937 - -
94. pigt ENSDARG00000075842 210 0.937 - - - - 0.937 - - - - phosphatidylinositol glycan anchor biosynthesis, class T [Source:ZFIN;Acc:ZDB-GENE-090313-46]
95. cep72 ENSDARG00000105258 344 0.937 - - - - 0.937 - - - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
96. zbtb20 ENSDARG00000005586 195 0.937 - - - - 0.937 - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
97. stub1 ENSDARG00000045228 105 0.937 - - - - 0.937 - - - - STIP1 homology and U-Box containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2963]
98. GRIN2B GRIN2B 140 0.936 - - - - 0.936 - - - -
99. GSTK1 ENSDARG00000056510 14 0.936 - - - - - - 0.936 - - glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298]
100. rereb ENSDARG00000075670 136 0.936 - - - - 0.936 - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]

There are 1623 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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