Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp22

Gene Name Gene ID Reads Annotation
usp22 ENSDARG00000040407 398 ubiquitin specific peptidase 22 [Source:ZFIN;Acc:ZDB-GENE-060512-211]










Genes with expression patterns similar to usp22

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp22 ENSDARG00000040407 398 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 22 [Source:ZFIN;Acc:ZDB-GENE-060512-211]
2. GPN1 ENSDARG00000043928 566 1.607 - - - - 0.832 - 0.775 - - GPN-loop GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-154]
3. klhl22 ENSDARG00000088807 324 1.583 - 0.746 - - - - 0.837 - - kelch-like family member 22 [Source:ZFIN;Acc:ZDB-GENE-081104-154]
4. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.55 - - - - 0.747 0.803 - - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
5. lrrc40 ENSDARG00000017708 1156 1.543 - 0.755 - - - - 0.788 - - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
6. SENP2 ENSDARG00000073837 1411 1.508 - - - - 0.751 0.757 - - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
7. SLC27A3 SLC27A3 240 1.508 - 0.763 - - 0.745 - - - -
8. gopc ENSDARG00000023117 1206 1.494 - 0.718 - - - - 0.776 - - golgi-associated PDZ and coiled-coil motif containing [Source:ZFIN;Acc:ZDB-GENE-030131-5086]
9. foxf1 ENSDARG00000015399 205 1.473 - 0.727 - - - - 0.746 - - forkhead box F1 [Source:ZFIN;Acc:ZDB-GENE-050419-153]
10. arhgap39 ENSDARG00000100007 344 1.459 - 0.716 - - 0.743 - - - - Rho GTPase activating protein 39 [Source:ZFIN;Acc:ZDB-GENE-041014-247]
11. MARVELD3 ENSDARG00000099654 325 1.458 - 0.720 - - 0.738 - - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
12. pspc1 ENSDARG00000006621 966 1.433 - - - 0.704 - 0.729 - - - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
13. vangl1 ENSDARG00000004305 335 0.916 - 0.916 - - - - - - - VANGL planar cell polarity protein 1 [Source:ZFIN;Acc:ZDB-GENE-040621-2]
14. galcb ENSDARG00000016474 615 0.916 - 0.916 - - - - - - - galactosylceramidase b [Source:ZFIN;Acc:ZDB-GENE-040426-2115]
15. CABZ01036080.1 CABZ01036080.1 46 0.896 - 0.896 - - - - - - -
16. LPL_1 LPL_1 1150 0.892 - - - - - - 0.892 - -
17. rbck1 ENSDARG00000031954 95 0.875 - 0.875 - - - - - - - RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]
18. PLEKHO2 ENSDARG00000016774 454 0.875 - 0.875 - - - - - - - pleckstrin homology domain containing, family O member 2 [Source:ZFIN;Acc:ZDB-GENE-120406-4]
19. swt1 ENSDARG00000094010 472 0.855 - 0.855 - - - - - - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
20. si:ch211-141o9.10 ENSDARG00000077900 98 0.853 - - - - - - 0.853 - - si:ch211-141o9.10 [Source:ZFIN;Acc:ZDB-GENE-130603-5]
21. rmi1 ENSDARG00000041376 674 0.851 - - - - 0.851 - - - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
22. HIVEP2 HIVEP2 87 0.849 - - - - - 0.849 - - -
23. LPHN3 LPHN3 195 0.848 - - - - - - 0.848 - -
24. zgc:173709 86 0.848 - - - - 0.848 - - - - zgc:173709
25. si:dkey-102m7.3 ENSDARG00000100366 27 0.844 - - - - 0.844 - - - - si:dkey-102m7.3 [Source:ZFIN;Acc:ZDB-GENE-091204-389]
26. rad23b ENSDARG00000021550 2575 0.842 - - - - - - 0.842 - - RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]
27. arpc5la ENSDARG00000041720 143 0.839 - - - - 0.839 - - - - actin related protein 2/3 complex, subunit 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1453]
28. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 0.835 - - - - 0.835 - - - - stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
29. DSN1 ENSDARG00000089922 269 0.829 - - - - - - 0.829 - - DSN1 homolog, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-170110-2]
30. tnc ENSDARG00000021948, ENSDARG00000113518 12162 0.829 - - - - - 0.829 - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
31. unc119b ENSDARG00000044362 1528 0.826 - - - - - 0.826 - - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
32. sp5 sp5 622 0.826 - 0.826 - - - - - - -
33. clip2 ENSDARG00000059596 529 0.826 - - - - 0.826 - - - - CAP-GLY domain containing linker protein 2 [Source:ZFIN;Acc:ZDB-GENE-100727-3]
34. h2afy ENSDARG00000099329 286 0.825 - 0.825 - - - - - - - H2A histone family, member Y [Source:ZFIN;Acc:ZDB-GENE-060421-4796]
35. map3k1 ENSDARG00000098405 3043 0.824 - 0.824 - - - - - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
36. efhc1 ENSDARG00000009743 113 0.823 - 0.823 - - - - - - - EF-hand domain (C-terminal) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1300]
37. BX323051.1 ENSDARG00000099065 1758 0.82 - - - - - - 0.820 - -
38. BX649453.2 BX649453.2 174 0.819 - - - - - - 0.819 - -
39. TRIM14_7 TRIM14_7 381 0.819 - - - - - - 0.819 - -
40. scamp3 ENSDARG00000016765 540 0.818 - 0.818 - - - - - - - secretory carrier membrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-041114-33]
41. nsmce4a ENSDARG00000024311 125 0.817 - - - - 0.817 - - - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
42. CR450842.1 CR450842.1 129 0.816 - - - - 0.816 - - - -
43. nbeaa ENSDARG00000070080 862 0.816 - - - 0.816 - - - - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
44. nlgn3b ENSDARG00000062376 171 0.816 - - - - 0.816 - - - - neuroligin 3b [Source:ZFIN;Acc:ZDB-GENE-060526-197]
45. dnajb12a ENSDARG00000039363 1072 0.815 - 0.815 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2725]
46. aldh2.2 ENSDARG00000028087 303 0.815 - - - - 0.815 - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
47. pggt1b ENSDARG00000103464 441 0.814 - - - - 0.814 - - - - protein geranylgeranyltransferase type I, beta subunit [Source:ZFIN;Acc:ZDB-GENE-050913-85]
48. asphd2 ENSDARG00000059629 1005 0.814 - - - - - 0.814 - - - aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
49. RBPMS ENSDARG00000099396 61 0.813 - - - - 0.813 - - - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
50. foxd1 ENSDARG00000029179 726 0.813 - - - - 0.813 - - - - forkhead box D1 [Source:ZFIN;Acc:ZDB-GENE-040426-2094]
51. cpsf4 ENSDARG00000020217 764 0.813 - - - - - - 0.813 - - cleavage and polyadenylation specific factor 4 [Source:ZFIN;Acc:ZDB-GENE-990415-180]
52. dynlt1 ENSDARG00000045909 2451 0.813 - 0.813 - - - - - - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
53. ubiad1 ENSDARG00000013009 383 0.813 - 0.813 - - - - - - - UbiA prenyltransferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3205]
54. CCDC88C ENSDARG00000053713 1026 0.812 - - - - - - 0.812 - - coiled-coil domain containing 88C [Source:ZFIN;Acc:ZDB-GENE-100419-3]
55. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 0.812 - - - - 0.812 - - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
56. CABZ01084569.1 CABZ01084569.1 650 0.812 - - - - - 0.812 - - -
57. ANO9 ANO9 688 0.812 - 0.812 - - - - - - -
58. per1b ENSDARG00000012499 320 0.811 - - - - - - 0.811 - - period circadian clock 1b [Source:ZFIN;Acc:ZDB-GENE-040419-1]
59. wfikkn2b ENSDARG00000059139 45 0.811 - - - - 0.811 - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
60. pax6l pax6l 54 0.811 - - - - 0.811 - - - -
61. arid1b ENSDARG00000092503 1376 0.81 - - - - - - 0.810 - - AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
62. zgc:158852 ENSDARG00000102076 65 0.81 - - - - 0.810 - - - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
63. mphosph10 ENSDARG00000012495 1679 0.809 - - - - - - 0.809 - - M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-2146]
64. rapgef5a ENSDARG00000075271 282 0.809 - - - - 0.809 - - - - Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681]
65. GTPBP6 ENSDARG00000061091 29 0.809 - - - - 0.809 - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
66. socs5b ENSDARG00000062745, ENSDARG00000112945, ENSDARG00000115523 646 0.809 - 0.809 - - - - - - - suppressor of cytokine signaling 5b [Source:ZFIN;Acc:ZDB-GENE-080722-18]
67. rpf2 ENSDARG00000043960 2719 0.808 - - - - - - 0.808 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
68. si:ch211-110p13.9 ENSDARG00000093821 82 0.808 - - - - 0.808 - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
69. gpr88 24 0.807 - - - - 0.807 - - - - G protein-coupled receptor 88
70. mir457b 21 0.807 - - - - 0.807 - - - - microRNA 457b
71. USP31 ENSDARG00000074017 628 0.807 - - - - 0.807 - - - - ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
72. CU694256.1 ENSDARG00000097007 290 0.806 - - - - 0.806 - - - -
73. MAP4K2 ENSDARG00000001234 39 0.806 - - - - 0.806 - - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
74. cep57l1 ENSDARG00000002826 521 0.805 - - - - 0.805 - - - - centrosomal protein 57, like 1 [Source:ZFIN;Acc:ZDB-GENE-040808-27]
75. senp3b ENSDARG00000056741 1296 0.804 - - - - 0.804 - - - - SUMO specific peptidase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6714]
76. C5H11orf1 C5H11orf1 78 0.804 - - - - 0.804 - - - -
77. si:ch211-288d18.1 ENSDARG00000011088 255 0.804 - - - - - 0.804 - - - si:ch211-288d18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-323]
78. rlbp1a ENSDARG00000012504 111 0.802 - - - - 0.802 - - - - retinaldehyde binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1662]
79. shank2 ENSDARG00000062325 66 0.801 - - - - 0.801 - - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
80. lin7a ENSDARG00000013414 1589 0.801 - - - - - 0.801 - - - lin-7 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-1665]
81. ppp1r15a ENSDARG00000069135 871 0.801 - - - - - 0.801 - - - protein phosphatase 1, regulatory subunit 15A [Source:ZFIN;Acc:ZDB-GENE-030131-4408]
82. KHDRBS3 ENSDARG00000101020 408 0.8 - - - - 0.800 - - - - KH RNA binding domain containing, signal transduction associated 3 [Source:HGNC Symbol;Acc:HGNC:18117]
83. lrrc32 ENSDARG00000040621 348 0.799 - - - - 0.799 - - - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
84. arv1 ENSDARG00000074757 227 0.799 - - - - 0.799 - - - - ARV1 homolog, fatty acid homeostasis modulator [Source:ZFIN;Acc:ZDB-GENE-080204-35]
85. zhx2 zhx2 365 0.799 - 0.799 - - - - - - -
86. slc16a6a ENSDARG00000102793 60 0.798 - - - - 0.798 - - - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
87. cryba2b ENSDARG00000041925 4329 0.798 - 0.798 - - - - - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
88. doc2d ENSDARG00000079962 76 0.798 - - - - - 0.798 - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
89. si:ch211-209n20.57 si:ch211-209n20.57 1188 0.797 0.797 - - - - - - - -
90. si:ch211-51h9.7 ENSDARG00000074720 227 0.797 - - - - 0.797 - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
91. rad51ap1 ENSDARG00000045853 811 0.797 - - - - 0.797 - - - - RAD51 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-050419-96]
92. ponzr3 ENSDARG00000088589, ENSDARG00000116407 1373 0.796 - - - - 0.796 - - - - plac8 onzin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-050506-38]
93. mkrn2 ENSDARG00000007630 127 0.796 - - - - 0.796 - - - - makorin, ring finger protein, 2 [Source:ZFIN;Acc:ZDB-GENE-020213-2]
94. TNS1 TNS1 628 0.796 - - - - - 0.796 - - -
95. nom1 ENSDARG00000060027, ENSDARG00000112720 831 0.795 - - - - 0.795 - - - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
96. dnase1l3 dnase1l3 455 0.795 - - - - 0.795 - - - -
97. wbscr22 wbscr22 644 0.795 - - - - 0.795 - - - -
98. crnkl1 ENSDARG00000007901 1952 0.795 - - - - - - 0.795 - - crooked neck pre-mRNA splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-694]
99. BX088524.2 ENSDARG00000103268 564 0.794 - - - - - 0.794 - - -
100. rbp7b ENSDARG00000070486, ENSDARG00000111858 449 0.793 - - - - - 0.793 - - - retinol binding protein 7b, cellular [Source:ZFIN;Acc:ZDB-GENE-081022-134]

There are 543 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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