Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp16

Gene Name Gene ID Reads Annotation
usp16 ENSDARG00000060633 684 ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]










Genes with expression patterns similar to usp16

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp16 ENSDARG00000060633 684 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
2. E2F2 E2F2 871 2.218 0.724 - - 0.747 - - - - 0.747
3. dnajc15 ENSDARG00000038309 1274 1.811 0.830 - - - 0.981 - - - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
4. csnk1g2a ENSDARG00000005458 2917 1.793 - - - - 0.969 - 0.824 - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
5. toporsb ENSDARG00000105028 1898 1.78 - - - - 0.990 - - - 0.790 topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
6. ctdspl2b ENSDARG00000060586 1682 1.775 0.797 - - - 0.978 - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
7. ercc6 ENSDARG00000075612 1175 1.757 - 0.765 - - 0.992 - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
8. hccs hccs 1758 1.735 0.752 - - - 0.983 - - - -
9. ttyh2 ENSDARG00000016934 1868 1.721 - 0.803 - - 0.918 - - - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
10. ppp1cbl ENSDARG00000102012 2301 1.719 - - - - 0.955 - 0.764 - - protein phosphatase 1, catalytic subunit, beta isoform, like [Source:ZFIN;Acc:ZDB-GENE-030131-6529]
11. rca2.1 ENSDARG00000056075 3410 1.718 - 0.727 - - 0.991 - - - - regulator of complement activation group 2 gene 1 [Source:ZFIN;Acc:ZDB-GENE-050320-60]
12. dcbld2 ENSDARG00000062177, ENSDARG00000112201 3795 1.712 0.774 - - - 0.938 - - - - discoidin, CUB and LCCL domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1822]
13. zgc:55461 ENSDARG00000116706, ENSDARG00000117112 2835 1.705 - - - - 0.981 0.724 - - - zgc:55461 [Source:ZFIN;Acc:ZDB-GENE-040426-2879]
14. TUBB8P7_1 TUBB8P7_1 2722 1.702 0.730 - - - 0.972 - - - -
15. dvl3a ENSDARG00000015707 1132 1.701 - 0.711 - - 0.990 - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
16. UBE2QL1 ENSDARG00000079276 3474 1.701 0.722 - - - 0.979 - - - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
17. slc2a15b ENSDARG00000053269 899 1.698 0.705 - - - 0.993 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
18. si:dkey-20j1.4 si:dkey-20j1.4 406 1.697 - 0.707 - - 0.990 - - - -
19. ing5b ENSDARG00000068175 2502 1.69 0.730 - - - 0.960 - - - - inhibitor of growth family, member 5b [Source:ZFIN;Acc:ZDB-GENE-030616-462]
20. nol9 ENSDARG00000077751 2471 1.689 - - - - 0.957 - 0.732 - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
21. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.683 0.718 - - - 0.965 - - - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
22. scube2 ENSDARG00000037362 2833 1.666 0.736 - - - 0.930 - - - - signal peptide, CUB domain, EGF-like 2 [Source:ZFIN;Acc:ZDB-GENE-050302-80]
23. PTDSS2 ENSDARG00000101018 881 1.633 - 0.847 - - - - 0.786 - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
24. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.629 0.832 - - - 0.797 - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
25. robo1 ENSDARG00000026784 125 1.615 - 0.778 - - - - - - 0.837 roundabout, axon guidance receptor, homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-3]
26. ctsc ENSDARG00000101334 3691 1.606 - - - - 0.779 - 0.827 - - cathepsin C [Source:ZFIN;Acc:ZDB-GENE-030619-9]
27. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.586 - - - - 0.856 - 0.730 - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
28. CR352229.2 CR352229.2 784 1.569 - 0.777 - - - - - - 0.792
29. myo5aa ENSDARG00000061635, ENSDARG00000116722 280 1.567 0.803 0.764 - - - - - - - myosin VAa [Source:ZFIN;Acc:ZDB-GENE-041027-2]
30. hoxa9b ENSDARG00000056819 3081 1.552 0.708 0.844 - - - - - - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
31. lamb2l ENSDARG00000033950 952 1.544 - 0.815 - - - - - - 0.729 laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
32. tmem79a ENSDARG00000071250 48 1.539 - 0.757 - - - - 0.782 - - transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]
33. polr1c ENSDARG00000039400 606 1.525 0.762 - - - - 0.763 - - - RNA polymerase I and III subunit C [Source:ZFIN;Acc:ZDB-GENE-040426-1495]
34. CDKN2AIP ENSDARG00000035853 341 1.501 - 0.793 - - - - - - 0.708 CDKN2A interacting protein [Source:ZFIN;Acc:ZDB-GENE-041010-188]
35. iars ENSDARG00000007955 1363 1.5 - - - - 0.767 0.733 - - - isoleucyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-6325]
36. CLDN22 CLDN22 114 1.49 - 0.783 - - - 0.707 - - -
37. gnb2l1 61553 1.488 0.716 - - - 0.772 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
38. zgc:113336 ENSDARG00000104078 147 1.486 - 0.743 - - - - - - 0.743 zgc:113336 [Source:ZFIN;Acc:ZDB-GENE-050320-55]
39. skilb ENSDARG00000022904 300 1.473 - 0.723 - - - - - - 0.750 SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
40. qdpra ENSDARG00000040190 4064 1.473 0.772 - - - - - 0.701 - - quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
41. si:dkey-204f11.64 ENSDARG00000094695 586 1.462 - 0.735 - - - - - - 0.727 si:dkey-204f11.64 [Source:ZFIN;Acc:ZDB-GENE-030131-8332]
42. MDC1 ENSDARG00000086764 1851 1.459 0.731 - - - - - - - 0.728 mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
43. si:dkey-56m15.5 ENSDARG00000103420 229 1.456 0.740 - - - - 0.716 - - - si:dkey-56m15.5 [Source:ZFIN;Acc:ZDB-GENE-110913-134]
44. cnnm2a ENSDARG00000061195 764 1.454 - 0.740 - - - 0.714 - - - cyclin and CBS domain divalent metal cation transport mediator 2a [Source:ZFIN;Acc:ZDB-GENE-050208-36]
45. CSGALNACT1 CSGALNACT1 116 1.449 - 0.722 - - - - - - 0.727
46. esrrga ENSDARG00000004861 805 1.446 0.706 - - - - - - - 0.740 estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
47. marveld2a ENSDARG00000025076 917 1.443 - - - 0.713 - - - - 0.730 MARVEL domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050411-59]
48. CABIN1 ENSDARG00000079326 905 1.434 - - - - - - 0.704 - 0.730 calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
49. tbp ENSDARG00000014994 1591 1.431 - 0.728 - - - - 0.703 - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
50. TIFA TIFA 1519 1.426 - - - 0.714 - - 0.712 - -
51. gorab ENSDARG00000042031 483 0.995 - - - - 0.995 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
52. fam193b ENSDARG00000102831 442 0.995 - - - - 0.995 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
53. pfkpb ENSDARG00000012801 223 0.995 - - - - 0.995 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
54. ccr10 ENSDARG00000040643 255 0.995 - - - - 0.995 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
55. myl2b ENSDARG00000053424 226 0.994 - - - - 0.994 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
56. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.994 - - - - 0.994 - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
57. spag7 ENSDARG00000011555 3224 0.994 - - - - 0.994 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
58. nefma ENSDARG00000021351 790 0.994 - - - - 0.994 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
59. med13b ENSDARG00000003910 1143 0.994 - - - - 0.994 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
60. FOXL2 239 0.994 - - - - 0.994 - - - - forkhead box L2, transcript variant X1
61. dopey1 438 0.994 - - - - 0.994 - - - - dopey family member 1, transcript variant X4
62. fut8 fut8 652 0.994 - - - - 0.994 - - - -
63. aldh16a1 ENSDARG00000037935 617 0.994 - - - - 0.994 - - - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
64. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.994 - - - - 0.994 - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
65. BX005008.2 BX005008.2 708 0.994 - - - - 0.994 - - - -
66. ccdc28b ENSDARG00000011222 528 0.994 - - - - 0.994 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
67. cuedc2 ENSDARG00000039365 484 0.993 - - - - 0.993 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
68. lgi1a ENSDARG00000020493 1218 0.993 - - - - 0.993 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
69. cenpi ENSDARG00000052565 482 0.993 - - - - 0.993 - - - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
70. lig4 ENSDARG00000060620 369 0.993 - - - - 0.993 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
71. TRAPPC10 ENSDARG00000098118 954 0.993 - - - - 0.993 - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
72. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 0.993 - - - - 0.993 - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
73. clu ENSDARG00000010434 498 0.993 - - - - 0.993 - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
74. atxn7l3 ENSDARG00000029331 531 0.993 - - - - 0.993 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
75. ago4 ENSDARG00000100854 496 0.993 - - - - 0.993 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
76. pdpk1b ENSDARG00000018285 957 0.993 - - - - 0.993 - - - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
77. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.993 - - - - 0.993 - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
78. aspg ENSDARG00000052942 1406 0.992 - - - - 0.992 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
79. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 0.992 - - - - 0.992 - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
80. exoc3l4 ENSDARG00000058180 923 0.992 - - - - 0.992 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
81. larp7 ENSDARG00000017315 1194 0.992 - - - - 0.992 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
82. msxe msxe 362 0.992 - - - - 0.992 - - - -
83. tab1 ENSDARG00000036613 445 0.992 - - - - 0.992 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
84. TUSC5_1 TUSC5_1 320 0.992 - - - - 0.992 - - - -
85. wdr24 ENSDARG00000025507 505 0.992 - - - - 0.992 - - - - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
86. MANBAL ENSDARG00000059853 636 0.992 - - - - 0.992 - - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
87. mnat1 ENSDARG00000002077 287 0.991 - - - - 0.991 - - - - MNAT CDK-activating kinase assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-041010-203]
88. smurf1 ENSDARG00000016086 878 0.991 - - - - 0.991 - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
89. CR759921.2 CR759921.2 583 0.991 - - - - 0.991 - - - -
90. cnep1r1 ENSDARG00000036064 1440 0.991 - - - - 0.991 - - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050417-425]
91. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.991 - - - - 0.991 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
92. GRAMD4 GRAMD4 1967 0.991 - - - - 0.991 - - - -
93. prdm16 prdm16 1346 0.99 - - - - 0.990 - - - -
94. katnbl1 ENSDARG00000042522 1086 0.99 - - - - 0.990 - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
95. tmem88a ENSDARG00000056920 536 0.99 - - - - 0.990 - - - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
96. bloc1s3 ENSDARG00000068828 502 0.99 - - - - 0.990 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
97. st8sia6 ENSDARG00000021195 2244 0.989 - - - - 0.989 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
98. hey2 ENSDARG00000013441 540 0.989 - - - - 0.989 - - - - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
99. larp4b ENSDARG00000062146 1601 0.989 - - - - 0.989 - - - - La ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
100. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.989 - - - - 0.989 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]

There are 1411 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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