Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for usp12a

Gene Name Gene ID Reads Annotation
usp12a ENSDARG00000078109 490 ubiquitin specific peptidase 12a [Source:ZFIN;Acc:ZDB-GENE-060228-3]










Genes with expression patterns similar to usp12a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp12a ENSDARG00000078109 490 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 12a [Source:ZFIN;Acc:ZDB-GENE-060228-3]
2. tmem194a tmem194a 745 2.364 - 0.856 - 0.797 - - 0.711 - -
3. gga3 ENSDARG00000103667 675 1.751 - 0.933 - - - 0.818 - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
4. wdr37 ENSDARG00000074611 468 1.669 - 0.872 - 0.797 - - - - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
5. CABZ01066717.1 CABZ01066717.1 351 1.646 - 0.929 - 0.717 - - - - -
6. si:dkey-67c22.2 ENSDARG00000055389 6410 1.639 - 0.903 - - - 0.736 - - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
7. mfsd5 ENSDARG00000015997 570 1.626 - 0.866 - 0.760 - - - - - major facilitator superfamily domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040718-468]
8. gltpd1 gltpd1 377 1.617 - 0.868 - 0.749 - - - - -
9. prkra ENSDARG00000076718 606 1.615 - 0.868 - 0.747 - - - - - protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
10. TMEM128 552 1.596 - - - 0.894 - 0.702 - - - transmembrane protein 128
11. tmem165 ENSDARG00000034600 1174 1.587 - 0.830 - - - 0.757 - - - transmembrane protein 165 [Source:ZFIN;Acc:ZDB-GENE-030131-3222]
12. LONRF2 LONRF2 721 1.583 - - - - - 0.705 0.878 - -
13. polb ENSDARG00000003749 2049 1.582 - 0.857 - - - - 0.725 - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
14. zswim5 ENSDARG00000055900 4243 1.572 - 0.801 - - - 0.771 - - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
15. ISCA2 ENSDARG00000038154 489 1.556 - 0.848 - - - - 0.708 - - iron-sulfur cluster assembly 2 [Source:ZFIN;Acc:ZDB-GENE-131121-486]
16. CU633849.1 CU633849.1 590 1.554 0.726 0.828 - - - - - - -
17. hnrnpa1 hnrnpa1 1302 1.55 - 0.829 - - - - 0.721 - -
18. LRRC8A LRRC8A 406 1.534 - - - 0.819 - 0.715 - - -
19. mgat1a ENSDARG00000012407 605 1.528 - 0.715 - 0.813 - - - - - mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase a [Source:ZFIN;Acc:ZDB-GENE-040426-1515]
20. si:ch211-113e8.10 ENSDARG00000079631 498 1.525 - 0.763 - 0.762 - - - - - si:ch211-113e8.10 [Source:ZFIN;Acc:ZDB-GENE-090313-11]
21. AGAP3 ENSDARG00000087822 4128 1.521 - 0.763 - - - - 0.758 - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-110927-1]
22. chic2 ENSDARG00000022690 184 1.503 0.726 - - 0.777 - - - - - cysteine-rich hydrophobic domain 2 [Source:ZFIN;Acc:ZDB-GENE-040426-778]
23. fkbp2 ENSDARG00000044540 1615 1.461 - - - 0.733 - - 0.728 - - FK506 binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-126]
24. srsf2b ENSDARG00000103893 1437 1.458 - 0.710 - - - 0.748 - - - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
25. slc44a5b ENSDARG00000057419 534 1.452 - - - 0.720 - 0.732 - - - solute carrier family 44, member 5b [Source:ZFIN;Acc:ZDB-GENE-081105-4]
26. sos2 ENSDARG00000060506 769 1.447 - - - 0.745 - 0.702 - - - son of sevenless homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090319-5]
27. nipa2 ENSDARG00000055912 1574 1.428 - 0.717 - 0.711 - - - - - NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]
28. wnt7aa ENSDARG00000044827 645 0.968 - 0.968 - - - - - - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
29. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 0.958 - 0.958 - - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
30. snoR38 snoR38 1068 0.957 - 0.957 - - - - - - -
31. csad ENSDARG00000026348 1461 0.955 - 0.955 - - - - - - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
32. lrrc6 ENSDARG00000053318 146 0.954 - 0.954 - - - - - - - leucine rich repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-040827-2]
33. wtap ENSDARG00000042642 1779 0.949 - 0.949 - - - - - - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
34. zgc:136474 zgc:136474 658 0.949 - 0.949 - - - - - - -
35. atp11c ENSDARG00000036442, ENSDARG00000116165 336 0.948 - 0.948 - - - - - - - ATPase phospholipid transporting 11C [Source:ZFIN;Acc:ZDB-GENE-030616-51]
36. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.948 - 0.948 - - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
37. TMEM71 TMEM71 696 0.948 - 0.948 - - - - - - -
38. si:ch73-18b11.2 ENSDARG00000094978 148 0.948 - 0.948 - - - - - - - si:ch73-18b11.2 [Source:ZFIN;Acc:ZDB-GENE-070912-333]
39. mfsd11 ENSDARG00000102828 1043 0.946 - 0.946 - - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
40. serpine2 ENSDARG00000029353 2274 0.945 - 0.945 - - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
41. rgcc ENSDARG00000035810, ENSDARG00000113601, ENSDARG00000114876, ENSDARG00000116965 3572 0.939 - 0.939 - - - - - - - regulator of cell cycle [Source:ZFIN;Acc:ZDB-GENE-040704-31]
42. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 0.938 - 0.938 - - - - - - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
43. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.938 - 0.938 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
44. si:ch211-51h9.7 ENSDARG00000074720 227 0.938 - 0.938 - - - - - - - si:ch211-51h9.7 [Source:ZFIN;Acc:ZDB-GENE-081104-235]
45. si:dkeyp-13a3.10 ENSDARG00000092225 1054 0.938 - 0.938 - - - - - - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
46. zgc:136851 zgc:136851 315 0.937 - 0.937 - - - - - - -
47. esrrd ENSDARG00000015064 291 0.936 - 0.936 - - - - - - - estrogen-related receptor delta [Source:ZFIN;Acc:ZDB-GENE-040616-3]
48. cmasb 499 0.936 - 0.936 - - - - - - - cytidine monophosphate N-acetylneuraminic acid synthetase b
49. tspan5b ENSDARG00000070449 1056 0.935 - 0.935 - - - - - - - tetraspanin 5b [Source:ZFIN;Acc:ZDB-GENE-041212-12]
50. ckap5 ENSDARG00000102674 5068 0.934 - 0.934 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
51. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 0.933 - 0.933 - - - - - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
52. kcnj1a.4 ENSDARG00000090635 356 0.93 - 0.930 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
53. sas sas 1783 0.93 - 0.930 - - - - - - -
54. fam63b 484 0.929 - 0.929 - - - - - - - family with sequence similarity 63, member B
55. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 0.928 - 0.928 - - - - - - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
56. eml2 ENSDARG00000008808 706 0.927 - 0.927 - - - - - - - echinoderm microtubule associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-050706-71]
57. flt4 ENSDARG00000104453 557 0.927 - 0.927 - - - - - - - fms-related tyrosine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-980526-326]
58. TM2D2 ENSDARG00000035515 561 0.926 - 0.926 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
59. lcn15 ENSDARG00000067851 140 0.926 - 0.926 - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
60. afap1 ENSDARG00000055284 730 0.926 - 0.926 - - - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
61. CR376783.1 ENSDARG00000074235 259 0.926 - 0.926 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
62. SEC16B ENSDARG00000099554 411 0.926 - 0.926 - - - - - - - SEC16 homolog B, endoplasmic reticulum export factor [Source:ZFIN;Acc:ZDB-GENE-050208-274]
63. atp5s ENSDARG00000012072 294 0.925 - 0.925 - - - - - - - ATP synthase, H+ transporting, mitochondrial F0 complex subunit s [Source:ZFIN;Acc:ZDB-GENE-040426-959]
64. pddc1 pddc1 257 0.925 - 0.925 - - - - - - -
65. map7d1b ENSDARG00000104701 1655 0.925 - 0.925 - - - - - - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
66. zdhhc9 ENSDARG00000060515 981 0.925 - 0.925 - - - - - - - zinc finger, DHHC-type containing 9 [Source:ZFIN;Acc:ZDB-GENE-071004-8]
67. tmem8a ENSDARG00000032795 677 0.924 - 0.924 - - - - - - - transmembrane protein 8A [Source:ZFIN;Acc:ZDB-GENE-090312-158]
68. cyp2v1 ENSDARG00000018485 694 0.922 - 0.922 - - - - - - - cytochrome P450, family 2, subfamily V, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040912-139]
69. jkamp ENSDARG00000028581 893 0.92 - 0.920 - - - - - - - jnk1/mapk8 associated membrane protein [Source:ZFIN;Acc:ZDB-GENE-040718-382]
70. aff4 ENSDARG00000001857 134 0.92 - 0.920 - - - - - - - AF4/FMR2 family, member 4 [Source:ZFIN;Acc:ZDB-GENE-100910-5]
71. tmem50a ENSDARG00000015757 3244 0.918 - 0.918 - - - - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
72. rab35 rab35 1287 0.918 - 0.918 - - - - - - -
73. stx5a ENSDARG00000025033, ENSDARG00000112598 380 0.917 - 0.917 - - - - - - - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
74. rab40c ENSDARG00000061208 1072 0.917 - 0.917 - - - - - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
75. igfbp1b ENSDARG00000038666 163 0.916 - 0.916 - - - - - - - insulin-like growth factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081210-3]
76. casp2 ENSDARG00000062052 559 0.916 - 0.916 - - - - - - - caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
77. nipsnap1 ENSDARG00000005320 330 0.916 - 0.916 - - - - - - - nipsnap homolog 1 (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-991008-17]
78. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 0.915 - 0.915 - - - - - - - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
79. crlf3 ENSDARG00000070261 904 0.915 - 0.915 - - - - - - - cytokine receptor-like factor 3 [Source:ZFIN;Acc:ZDB-GENE-050417-354]
80. babam1 ENSDARG00000077526 776 0.914 - 0.914 - - - - - - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
81. slc4a1ap ENSDARG00000034160 749 0.914 - 0.914 - - - - - - - solute carrier family 4 (anion exchanger), member 1, adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080521-2]
82. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.913 - 0.913 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
83. ptk2bb ENSDARG00000039577 776 0.912 - 0.912 - - - - - - - protein tyrosine kinase 2 beta, b [Source:ZFIN;Acc:ZDB-GENE-020507-1]
84. tial1 ENSDARG00000009525 1856 0.911 - 0.911 - - - - - - - TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1547]
85. BX005256.1 ENSDARG00000106112 467 0.911 - 0.911 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
86. btbd6a ENSDARG00000076440 748 0.91 - 0.910 - - - - - - - BTB (POZ) domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-080218-26]
87. si:ch211-215d8.2 ENSDARG00000093233 784 0.91 - 0.910 - - - - - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
88. unc13d ENSDARG00000078249 91 0.91 - 0.910 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
89. six2a ENSDARG00000058004, ENSDARG00000115214 414 0.909 - 0.909 - - - - - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
90. GEMIN7 ENSDARG00000041011 529 0.909 - 0.909 - - - - - - - gem (nuclear organelle) associated protein 7 [Source:ZFIN;Acc:ZDB-GENE-120409-2]
91. RAPGEFL1 ENSDARG00000079912 1074 0.908 - 0.908 - - - - - - - Rap guanine nucleotide exchange factor (GEF)-like 1 [Source:ZFIN;Acc:ZDB-GENE-131121-404]
92. acad11 ENSDARG00000045411 350 0.908 - 0.908 - - - - - - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
93. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.907 - 0.907 - - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
94. ormdl2 ENSDARG00000058022 1146 0.907 - 0.907 - - - - - - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
95. itpkb ENSDARG00000010059 2352 0.907 - 0.907 - - - - - - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
96. wdfy4 ENSDARG00000077009 802 0.906 - 0.906 - - - - - - - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
97. f7 ENSDARG00000034862 405 0.906 - 0.906 - - - - - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
98. prkar1ab ENSDARG00000101755 555 0.906 - 0.906 - - - - - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b [Source:ZFIN;Acc:ZDB-GENE-050417-238]
99. kremen1 ENSDARG00000062579 190 0.906 - 0.906 - - - - - - - kringle containing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070705-262]
100. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 0.906 - 0.906 - - - - - - - ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]

There are 943 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA