Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for usp11

Gene Name Gene ID Reads Annotation
usp11 ENSDARG00000076303 183 ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421]










Genes with expression patterns similar to usp11

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usp11 ENSDARG00000076303 183 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421]
2. si:ch211-219f7.3 si:ch211-219f7.3 48 1.886 - - - - - 0.927 0.959 - -
3. trim62 ENSDARG00000060901 12 1.838 0.885 - - - - - 0.953 - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
4. zgc:174651 zgc:174651 90 1.814 - - - - - 0.879 0.935 - -
5. trim25l ENSDARG00000020863 292 1.807 - - - - - 0.925 0.882 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
6. TPMT TPMT 138 1.804 - - - - - 0.915 0.889 - -
7. CR855306.1 ENSDARG00000099475 102 1.774 0.804 - - - - - 0.970 - -
8. SUOX ENSDARG00000091574 122 1.773 - - - - - 0.831 0.942 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
9. tbc1d22a ENSDARG00000045510 363 1.766 - 0.798 - - - - 0.968 - - TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
10. si:ch211-284o19.8 ENSDARG00000053836 43 1.743 - - - - - 0.793 0.950 - - si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
11. zgc:113452 ENSDARG00000074146 759 1.735 - - - - - 0.848 0.887 - - zgc:113452 [Source:ZFIN;Acc:ZDB-GENE-050913-16]
12. cldn11a ENSDARG00000020031 284 1.73 0.885 0.845 - - - - - - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
13. CABZ01059408.1 ENSDARG00000116928 24 1.73 0.885 0.845 - - - - - - -
14. kcnk1a ENSDARG00000045067 743 1.723 - - - - - 0.866 0.857 - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
15. si:ch211-190k17.19 ENSDARG00000095756 19 1.722 - 0.845 - - - 0.877 - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
16. crygm2d3 ENSDARG00000088823 1560 1.717 - 0.803 - - - 0.914 - - - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
17. fastkd1 ENSDARG00000056128 141 1.716 - - - - - 0.794 0.922 - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
18. hsdl1 ENSDARG00000041736 171 1.713 - - - - - 0.819 0.894 - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
19. med29 ENSDARG00000026448, ENSDARG00000109733 972 1.702 - 0.844 - - - - 0.858 - - mediator complex subunit 29 [Source:ZFIN;Acc:ZDB-GENE-021217-1]
20. mmp9 ENSDARG00000042816 298 1.7 - - - - - 0.813 0.887 - - matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
21. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.696 - - - - - 0.766 0.930 - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
22. ZNF385D ENSDARG00000086162 202 1.686 - 0.938 - - - - 0.748 - - zinc finger protein 385D [Source:ZFIN;Acc:ZDB-GENE-130201-2]
23. gltpd1 gltpd1 377 1.679 0.807 - - - - - 0.872 - -
24. eif4enif1 ENSDARG00000016177 238 1.67 0.761 - - - - - 0.909 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
25. rad18 ENSDARG00000027938 574 1.67 - - - - - 0.931 0.739 - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
26. si:ch211-207m11.3 si:ch211-207m11.3 401 1.665 - 0.766 - - - - 0.899 - -
27. si:dkeyp-82b4.2 ENSDARG00000112648 14 1.663 - 0.845 - - - 0.818 - - - si:dkeyp-82b4.2 [Source:ZFIN;Acc:ZDB-GENE-060503-561]
28. dbpa ENSDARG00000063014 107 1.661 0.836 0.825 - - - - - - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
29. tmem205 ENSDARG00000100677 101 1.652 - - - - - 0.887 0.765 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
30. FBXL7 ENSDARG00000062251 179 1.643 0.819 - - - - - 0.824 - - F-box and leucine-rich repeat protein 7 [Source:ZFIN;Acc:ZDB-GENE-061215-122]
31. IER2 IER2 604 1.641 - - - - - 0.816 0.825 - -
32. spint1b ENSDARG00000012467 97 1.637 - - - - - 0.758 0.879 - - serine peptidase inhibitor, Kunitz type 1 b [Source:ZFIN;Acc:ZDB-GENE-071218-1]
33. si:dkey-4c15.16 ENSDARG00000097261 154 1.629 - - - - - 0.740 0.889 - - si:dkey-4c15.16 [Source:ZFIN;Acc:ZDB-GENE-050420-215]
34. mob1a_1 ENSDARG00000102320, ENSDARG00000111884, ENSDARG00000116249 91 1.629 0.721 - - - - - 0.908 - - MOB kinase activator 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6506]
35. Mar-02_1 Mar-02_1 146 1.627 - 0.783 - - - - 0.844 - -
36. si:dkey-3d18.4 si:dkey-3d18.4 43 1.627 0.826 - - - - 0.801 - - -
37. lpcat4 ENSDARG00000035028 167 1.626 0.810 - - - - - 0.816 - - lysophosphatidylcholine acyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5777]
38. si:ch211-59m15.1 87 1.62 - 0.710 - - - 0.910 - - - si:ch211-59m15.1
39. eif2ak2 ENSDARG00000068729 184 1.611 - 0.850 - - - 0.761 - - - eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1]
40. efcab4a efcab4a 110 1.61 - 0.733 - - - - 0.877 - -
41. slc9a6b ENSDARG00000075382 151 1.609 - 0.706 - - - 0.903 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6b [Source:ZFIN;Acc:ZDB-GENE-080226-2]
42. BX005423.3 BX005423.3 33 1.602 - 0.763 - - - 0.839 - - -
43. ANKS3 ENSDARG00000038557 235 1.596 - 0.783 - - - - 0.813 - - ankyrin repeat and sterile alpha motif domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-080204-51]
44. ptger1b ENSDARG00000104847 91 1.589 0.885 - - - - 0.704 - - - prostaglandin E receptor 1b (subtype EP1) [Source:ZFIN;Acc:ZDB-GENE-100922-278]
45. zgc:136439 ENSDARG00000009267 720 1.587 - - - - - 0.714 0.873 - - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
46. megf6a ENSDARG00000079199 103 1.577 - - - - - 0.701 0.876 - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
47. tgm5l ENSDARG00000098837 174 1.573 - - - - - 0.851 0.722 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
48. si:dkey-56e3.2 ENSDARG00000092551 835 1.572 0.715 - - - - - 0.857 - - si:dkey-56e3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-316]
49. gadd45aa ENSDARG00000043581 114 1.571 - 0.739 - - - - 0.832 - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
50. ADAMTS16 ENSDARG00000074646 277 1.546 0.835 - - - - 0.711 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 16 [Source:ZFIN;Acc:ZDB-GENE-130530-760]
51. osbpl10 osbpl10 836 1.544 - - - - - 0.803 0.741 - -
52. dlgap1b ENSDARG00000037415 658 1.541 0.731 - - - - - 0.810 - - discs, large (Drosophila) homolog-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-091116-98]
53. sirt3 ENSDARG00000035819 101 1.535 - 0.798 - - - 0.737 - - - sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
54. ca15a ENSDARG00000015654 2657 1.531 0.781 - - - - 0.750 - - - carbonic anhydrase XVa [Source:ZFIN;Acc:ZDB-GENE-070424-7]
55. C18H15orf38 C18H15orf38 370 1.525 - 0.787 - - - - 0.738 - -
56. ikbkb ENSDARG00000079123 498 1.519 - - - - - 0.726 0.793 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
57. C21HXorf40A C21HXorf40A 216 1.517 - 0.704 - - - - 0.813 - -
58. olfml3b ENSDARG00000062171 264 1.515 - - - - - 0.714 0.801 - - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
59. TMEM120A ENSDARG00000030914 266 1.512 0.751 - - - - 0.761 - - - transmembrane protein 120A [Source:ZFIN;Acc:ZDB-GENE-070424-21]
60. mlec ENSDARG00000059630 2057 1.51 - - - - - 0.701 0.809 - - malectin [Source:ZFIN;Acc:ZDB-GENE-081105-187]
61. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.502 0.780 0.722 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
62. ptprjb ptprjb 95 1.483 0.766 0.717 - - - - - - -
63. b4galt7 ENSDARG00000021899 546 1.481 - 0.768 - - - - 0.713 - - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
64. kctd15a ENSDARG00000045893 1272 1.454 - - - - - 0.703 0.751 - - potassium channel tetramerization domain containing 15a [Source:ZFIN;Acc:ZDB-GENE-041010-105]
65. mon1a ENSDARG00000078585 554 1.434 - - - - - 0.714 0.720 - - MON1 secretory trafficking family member A [Source:ZFIN;Acc:ZDB-GENE-070615-6]
66. agxta ENSDARG00000052099 65 0.984 - 0.984 - - - - - - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
67. fabp11a_1 ENSDARG00000017299 387 0.983 - 0.983 - - - - - - - fatty acid binding protein 11a [Source:ZFIN;Acc:ZDB-GENE-040912-132]
68. TENM3 ENSDARG00000005479 39 0.983 - 0.983 - - - - - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
69. polr2b ENSDARG00000098783 90 0.98 - - - - - - 0.980 - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
70. TARS2 76 0.977 - - - - - - 0.977 - - threonyl-tRNA synthetase 2, mitochondrial (putative), transcript variant X2
71. CU638740.3 CU638740.3 164 0.976 - - - - - - 0.976 - -
72. mia2 ENSDARG00000099973 139 0.974 - - - - - - 0.974 - - MIA SH3 domain ER export factor 2 [Source:ZFIN;Acc:ZDB-GENE-100618-1]
73. si:ch211-213i16.2 si:ch211-213i16.2 6 0.972 - - - - - 0.972 - - -
74. adam9 ENSDARG00000010070 192 0.972 - - - - - - 0.972 - - ADAM metallopeptidase domain 9 [Source:ZFIN;Acc:ZDB-GENE-040912-127]
75. tmprss13b ENSDARG00000077573 47 0.972 - - - - - 0.972 - - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
76. cyp1a ENSDARG00000098315 273 0.971 - 0.971 - - - - - - - cytochrome P450, family 1, subfamily A [Source:ZFIN;Acc:ZDB-GENE-011219-1]
77. TERF2IP ENSDARG00000103977 216 0.97 - - - - - 0.970 - - - telomeric repeat binding factor 2, interacting protein [Source:ZFIN;Acc:ZDB-GENE-131121-641]
78. cuedc2 ENSDARG00000039365 484 0.968 - 0.968 - - - - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
79. sdccag8 ENSDARG00000078947 68 0.967 - 0.967 - - - - - - - serologically defined colon cancer antigen 8 [Source:ZFIN;Acc:ZDB-GENE-090313-318]
80. si:dkey-48n15.2 si:dkey-48n15.2 297 0.965 - 0.965 - - - - - - -
81. GSG2 GSG2 1162 0.964 - - - - - - 0.964 - -
82. lpar6b ENSDARG00000069441 65 0.962 - - - - - - 0.962 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
83. hoxd13a ENSDARG00000059256 1190 0.961 - - - - - 0.961 - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
84. BX296557.2 BX296557.2 1083 0.96 - - - - - - 0.960 - -
85. dhrs13l1 ENSDARG00000098746 102 0.959 - - - - - - 0.959 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
86. si:dkey-17e16.17 615 0.957 - - - - - - 0.957 - - si:dkey-17e16.17
87. si:ch211-121j5.2 si:ch211-121j5.2 86 0.956 - - - - - - 0.956 - -
88. TRHDE_1 TRHDE_1 102 0.955 - - - - - - 0.955 - -
89. stat2 ENSDARG00000031647, ENSDARG00000116348 441 0.955 - - - - - 0.955 - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
90. U3 U3 287 0.954 - - - - - - 0.954 - -
91. pign ENSDARG00000077532 123 0.954 - - - - - - 0.954 - - phosphatidylinositol glycan anchor biosynthesis, class N [Source:ZFIN;Acc:ZDB-GENE-080204-114]
92. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.954 - - - - - - 0.954 - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
93. CU681846.1 CU681846.1 86 0.954 - - - - - - 0.954 - -
94. hoxa13a ENSDARG00000100312 543 0.954 - - - - - - 0.954 - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
95. guca1c ENSDARG00000030758 9 0.953 - - - - - - 0.953 - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
96. esrrgb ENSDARG00000011696 108 0.953 - - - - - 0.953 - - - estrogen-related receptor gamma b [Source:ZFIN;Acc:ZDB-GENE-040616-4]
97. zgc:136254 ENSDARG00000068465 27 0.953 - - - - - - 0.953 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
98. ttr ENSDARG00000037191 11 0.953 - - - - - - 0.953 - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
99. si:busm1-180g5.7 si:busm1-180g5.7 15 0.953 - - - - - - 0.953 - -
100. VWA5A_1 VWA5A_1 6 0.953 - - - - - - 0.953 - -

There are 1521 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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