Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ush2a

Gene Name Gene ID Reads Annotation
ush2a ENSDARG00000029482 10 Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]










Genes with expression patterns similar to ush2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ush2a ENSDARG00000029482 10 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
2. crispld1a ENSDARG00000077275 7 2 - - 1.000 - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
3. BEGAIN_1 BEGAIN_1 7 2 - - - - 1.000 1.000 - - -
4. si:dkey-284p5.3 ENSDARG00000095638 4 2 - - 1.000 - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
5. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 2 - - - - 1.000 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
6. asip asip 2 2 - - - - 1.000 1.000 - - -
7. si:ch211-93g21.1 ENSDARG00000093602 5 2 - - 1.000 - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
8. GPX2 ENSDARG00000089149 10 2 - - 1.000 - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
9. si:ch73-366i20.1_1 ENSDARG00000092949 1 2 - - 1.000 - 1.000 - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
10. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1.965 - - - - - 1.000 0.965 - - si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
11. dao.2 ENSDARG00000035603 8 1.965 - - - - 1.000 - 0.965 - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
12. AL929092.1_1 ENSDARG00000092217 3 1.965 - - - - 1.000 - 0.965 - -
13. si:dkey-47k20.7 ENSDARG00000056014 1 1.965 - - - - - 1.000 0.965 - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
14. VSIG10L ENSDARG00000089237 12 1.919 - - 0.919 - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
15. zgc:113030 ENSDARG00000069869 53 1.898 - - - - - 1.000 0.898 - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
16. NLRC5 ENSDARG00000024631 11 1.896 - - 1.000 - - - - 0.896 - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
17. AL929092.3 AL929092.3 0 1.896 - - 1.000 - - - - 0.896 -
18. cx52.9 ENSDARG00000086453 7 1.896 - - - - 1.000 - - 0.896 - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
19. CU633740.2 CU633740.2 16 1.881 - - 0.881 - - 1.000 - - -
20. SHISA7 SHISA7 1 1.869 - - - - 1.000 - - 0.869 -
21. SYNPR ENSDARG00000037587 20 1.864 - - - - 1.000 0.864 - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
22. si:dkey-24c2.6 si:dkey-24c2.6 1 1.858 - - - - 0.858 1.000 - - -
23. CABZ01112732.1 ENSDARG00000068453 4 1.821 - - - - 0.821 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
24. gpr88 24 1.772 - - 0.772 - - 1.000 - - - G protein-coupled receptor 88
25. brinp3b ENSDARG00000075352 14 1.771 - - 1.000 - - 0.771 - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
26. zgc:165627 zgc:165627 4 1.733 - - 0.733 - 1.000 - - - -
27. CT030048.2 CT030048.2 3 1.733 - - 0.733 - 1.000 - - - -
28. si:ch211-167b20.7 si:ch211-167b20.7 3 1.729 - - 0.764 - - - 0.965 - -
29. CABZ01085177.1 ENSDARG00000104644 6 1.725 - - 1.000 - 0.725 - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
30. grapb ENSDARG00000022668 6 1.702 - - - - - 1.000 - - 0.702 GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
31. cnrip1b ENSDARG00000037337 39 1.694 - - 0.849 - - 0.845 - - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
32. C10H5orf42 C10H5orf42 5 1.629 - - 0.733 - - - - 0.896 -
33. kitb ENSDARG00000056133, ENSDARG00000113747 10 1.621 - - - - 0.725 - - 0.896 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
34. CT573234.2 CT573234.2 1 1 - - - - - 1.000 - - -
35. prg4a ENSDARG00000010482 10 1 - - 1.000 - - - - - - proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
36. CR788320.1 CR788320.1 1 1 - - - - - 1.000 - - -
37. CMA1_10 CMA1_10 0 1 - - - - - 1.000 - - -
38. si:dkey-63d15.12 ENSDARG00000075480 9 1 - - - - - 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
39. MYO9B ENSDARG00000078313 97 1 - - - - - 1.000 - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
40. zgc:153441 ENSDARG00000054797 9 1 - - - - 1.000 - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
41. si:dkey-167k11.3 si:dkey-167k11.3 3 1 - - - - - 1.000 - - -
42. si:dkey-47k16.4 ENSDARG00000113005 87 1 - - 1.000 - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
43. cacng7b ENSDARG00000070624 18 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
44. gyg2 ENSDARG00000033380 12 1 - - - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
45. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
46. si:ch73-249k16.3 si:ch73-249k16.3 3 1 - - 1.000 - - - - - -
47. zp2.5 ENSDARG00000086522 15 1 - - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
48. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - - 1.000 - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
49. LRRK1_1 LRRK1_1 11 1 - - - - - 1.000 - - -
50. NUGGC NUGGC 9 1 - - - - - 1.000 - - -
51. slc26a4 ENSDARG00000069431 2 1 - - 1.000 - - - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
52. phlpp2 ENSDARG00000090255 1 1 - - - - - 1.000 - - - PH domain and leucine rich repeat protein phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-070719-3]
53. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - - - - 1.000 - - -
54. FAM188B2 4 1 - - - - 1.000 - - - - family with sequence similarity 188, member B2
55. nptx2b ENSDARG00000045164 5 1 - - - - 1.000 - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
56. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - 1.000 - - - -
57. pgap2 ENSDARG00000044596 60 1 - - - - - 1.000 - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
58. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
59. ZNF337_14 ZNF337_14 4 1 - - - - 1.000 - - - -
60. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
61. Metazoa_SRP_28 Metazoa_SRP_28 0 1 - - - - 1.000 - - - -
62. arhgap23b ENSDARG00000026840 6 1 - - - - - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
63. OLFM4 OLFM4 6 1 - - 1.000 - - - - - -
64. clec3ba ENSDARG00000076541 3 1 - - 1.000 - - - - - - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
65. pde5ab ENSDARG00000051915 18 1 - - 1.000 - - - - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
66. trim35-27 ENSDARG00000035009 62 1 - - - - - - 1.000 - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
67. si:dkey-29j8.4 si:dkey-29j8.4 17 1 - - 1.000 - - - - - -
68. BX936443.2 BX936443.2 28 1 - - 1.000 - - - - - -
69. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - - - 1.000 - - -
70. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - - - 1.000 - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
71. ASPG ENSDARG00000052942 1 1 - - - - 1.000 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
72. FP085391.3 FP085391.3 14 1 - - - - - 1.000 - - -
73. si:rp71-31c2.1 si:rp71-31c2.1 1 1 - - - - 1.000 - - - -
74. LRRC71 LRRC71 11 1 - - - - - 1.000 - - -
75. klhl24 klhl24 40 1 - - - - - 1.000 - - -
76. mdm1 ENSDARG00000045675 64 1 - - - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
77. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - 1.000 - - -
78. or112-1 ENSDARG00000077211 2 1 - - - - - 1.000 - - - odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
79. sh2d1aa ENSDARG00000095348 4 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
80. CU633848.1 CU633848.1 4 1 - - - - - 1.000 - - -
81. 5S_rRNA_27 5S_rRNA_27 2 1 - - 1.000 - - - - - -
82. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - 1.000 - - -
83. olfcd3 ENSDARG00000068576 0 1 - - - - - 1.000 - - - olfactory receptor C family, d3 [Source:ZFIN;Acc:ZDB-GENE-050712-4]
84. si:ch211-249h16.8 ENSDARG00000093630 1 1 - - - - 1.000 - - - - si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36]
85. grin2cb ENSDARG00000077560 9 1 - - - - - 1.000 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
86. BX640518.1 BX640518.1 24 1 - - - - - 1.000 - - -
87. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - 1.000 - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
88. si:ch211-201p7.9 si:ch211-201p7.9 2 1 - - - - 1.000 - - - -
89. rx3 ENSDARG00000052893 43 1 - - - - - 1.000 - - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
90. nbn ENSDARG00000040303 43 1 - - - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
91. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - - - - - 1.000 - - -
92. foxb1a ENSDARG00000089042 101 1 - - - - - 1.000 - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
93. zgc:194659 ENSDARG00000079347 17 1 - - - - 1.000 - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
94. CR792453.3 ENSDARG00000110328 5 1 - - - - - 1.000 - - - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
95. CABZ01012885.1 ENSDARG00000100377 0 1 - - - - - 1.000 - - - extracellular calcium-sensing receptor-like [Source:NCBI gene;Acc:100007225]
96. zgc:136639os zgc:136639os 2 1 - - 1.000 - - - - - -
97. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - - 1.000 - - -
98. hif1al2 ENSDARG00000044550 140 1 - - - - - 1.000 - - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
99. si:dkey-105n5.3 si:dkey-105n5.3 9 1 - - - - - 1.000 - - -
100. caspbl ENSDARG00000094433 1 1 - - - - - 1.000 - - - caspase b, like [Source:ZFIN;Acc:ZDB-GENE-090311-53]

There are 916 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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