Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ush2a

Gene Name Gene ID Reads Annotation
ush2a ENSDARG00000029482 10 Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]










Genes with expression patterns similar to ush2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ush2a ENSDARG00000029482 10 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
2. si:ch73-366i20.1_1 ENSDARG00000092949 1 2 - - 1.000 - 1.000 - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
3. si:ch211-93g21.1 ENSDARG00000093602 5 2 - - 1.000 - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
4. asip asip 2 2 - - - - 1.000 1.000 - - -
5. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 2 - - - - 1.000 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
6. crispld1a ENSDARG00000077275 7 2 - - 1.000 - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
7. BEGAIN_1 BEGAIN_1 7 2 - - - - 1.000 1.000 - - -
8. si:dkey-284p5.3 ENSDARG00000095638 4 2 - - 1.000 - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
9. GPX2 ENSDARG00000089149 10 2 - - 1.000 - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
10. dao.2 ENSDARG00000035603 8 1.965 - - - - 1.000 - 0.965 - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
11. si:dkey-47k20.7 ENSDARG00000056014 1 1.965 - - - - - 1.000 0.965 - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
12. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1.965 - - - - - 1.000 0.965 - - si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
13. AL929092.1_1 ENSDARG00000092217 3 1.965 - - - - 1.000 - 0.965 - -
14. VSIG10L ENSDARG00000089237 12 1.919 - - 0.919 - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
15. zgc:113030 ENSDARG00000069869 53 1.898 - - - - - 1.000 0.898 - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
16. AL929092.3 AL929092.3 0 1.896 - - 1.000 - - - - 0.896 -
17. NLRC5 ENSDARG00000024631 11 1.896 - - 1.000 - - - - 0.896 - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
18. cx52.9 ENSDARG00000086453 7 1.896 - - - - 1.000 - - 0.896 - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
19. CU633740.2 CU633740.2 16 1.881 - - 0.881 - - 1.000 - - -
20. SHISA7 SHISA7 1 1.869 - - - - 1.000 - - 0.869 -
21. SYNPR ENSDARG00000037587 20 1.864 - - - - 1.000 0.864 - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
22. si:dkey-24c2.6 si:dkey-24c2.6 1 1.858 - - - - 0.858 1.000 - - -
23. CABZ01112732.1 ENSDARG00000068453 4 1.821 - - - - 0.821 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
24. gpr88 24 1.772 - - 0.772 - - 1.000 - - - G protein-coupled receptor 88
25. brinp3b ENSDARG00000075352 14 1.771 - - 1.000 - - 0.771 - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
26. CT030048.2 CT030048.2 3 1.733 - - 0.733 - 1.000 - - - -
27. zgc:165627 zgc:165627 4 1.733 - - 0.733 - 1.000 - - - -
28. si:ch211-167b20.7 si:ch211-167b20.7 3 1.729 - - 0.764 - - - 0.965 - -
29. CABZ01085177.1 ENSDARG00000104644 6 1.725 - - 1.000 - 0.725 - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
30. grapb ENSDARG00000022668 6 1.702 - - - - - 1.000 - - 0.702 GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
31. cnrip1b ENSDARG00000037337 39 1.694 - - 0.849 - - 0.845 - - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
32. C10H5orf42 C10H5orf42 5 1.629 - - 0.733 - - - - 0.896 -
33. kitb ENSDARG00000056133, ENSDARG00000113747 10 1.621 - - - - 0.725 - - 0.896 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
34. zgc:113516 20 1 - - - - - 1.000 - - - zgc:113516
35. aptx ENSDARG00000027143 87 1 - - - - - 1.000 - - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
36. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - - - 1.000 - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
37. otogl ENSDARG00000088750 2 1 - - - - 1.000 - - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]
38. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1 - - - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
39. SCARNA15 SCARNA15 1 1 - - 1.000 - - - - - -
40. FNDC7_2 FNDC7_2 18 1 - - - - 1.000 - - - -
41. si:dkey-111e8.2 si:dkey-111e8.2 0 1 - - - - - 1.000 - - -
42. mespba ENSDARG00000030347, ENSDARG00000110553 1 1 - - 1.000 - - - - - - mesoderm posterior ba [Source:ZFIN;Acc:ZDB-GENE-000406-9]
43. si:dkey-92j16.1 si:dkey-92j16.1 1 1 - - - - 1.000 - - - -
44. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - - 1.000 - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
45. si:dkey-14a7.4 si:dkey-14a7.4 5 1 - - - - 1.000 - - - -
46. taar14d ENSDARG00000091705, ENSDARG00000111452 1 1 - - - - - 1.000 - - - trace amine associated receptor 14d [Source:ZFIN;Acc:ZDB-GENE-041210-315]
47. dnajc5b ENSDARG00000058147 6 1 - - 1.000 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
48. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1 - - - - - 1.000 - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
49. CR846080.4 CR846080.4 6 1 - - - - - 1.000 - - -
50. ABCD2 ENSDARG00000059409 1 1 - - 1.000 - - - - - - ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
51. si:dkey-285e18.5 ENSDARG00000093665 5 1 - - - - 1.000 - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
52. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - - - - 1.000 - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
53. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - 1.000 - - - - - - si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
54. CCSER1 ENSDARG00000075919 16 1 - - - - - 1.000 - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
55. U1_45 U1_45 0 1 - - 1.000 - - - - - -
56. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - - 1.000 - - -
57. sh2d4b sh2d4b 1 1 - - - - - 1.000 - - -
58. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - - 1.000 - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
59. AL935125.1 AL935125.1 0 1 - - - - 1.000 - - - -
60. htr1bd htr1bd 8 1 - - - - - 1.000 - - -
61. lratb 3 1 - - 1.000 - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
62. si:ch211-210g13.5 ENSDARG00000062575 1 1 - - - - 1.000 - - - - si:ch211-210g13.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5675]
63. slc2a11l ENSDARG00000062873 1 1 - - - - - 1.000 - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
64. uts2a ENSDARG00000053854, ENSDARG00000116102 16 1 - - - - - 1.000 - - - urotensin 2, alpha [Source:ZFIN;Acc:ZDB-GENE-040630-11]
65. si:dkey-219e20.2 ENSDARG00000094224 3 1 - - - - 1.000 - - - - si:dkey-219e20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-105]
66. emc4 ENSDARG00000039268 553 1 - - - - - 1.000 - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
67. si:dkeyp-104h9.7 si:dkeyp-104h9.7 0 1 - - 1.000 - - - - - -
68. GABRA3 ENSDARG00000090883 5 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
69. nkain2 ENSDARG00000069427 0 1 - - 1.000 - - - - - - sodium/potassium transporting ATPase interacting 2 [Source:ZFIN;Acc:ZDB-GENE-041014-77]
70. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - 1.000 - - - -
71. nptx2b ENSDARG00000045164 5 1 - - - - 1.000 - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
72. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 1 - - - - 1.000 - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
73. IL4I1 IL4I1 4 1 - - - - 1.000 - - - -
74. mcoln1b ENSDARG00000058848 3 1 - - 1.000 - - - - - - mucolipin 1b [Source:ZFIN;Acc:ZDB-GENE-130514-1]
75. RBM20 74 1 - - - - - 1.000 - - - RNA binding motif protein 20, transcript variant X1
76. lipt2 ENSDARG00000069852 14 1 - - - - 1.000 - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
77. PRKCA_1 ENSDARG00000099841 12 1 - - 1.000 - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
78. si:dkey-248g17.3 si:dkey-248g17.3 34 1 - - - - - 1.000 - - -
79. VOPP1 ENSDARG00000076373 12 1 - - 1.000 - - - - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
80. si:dkey-22h13.5 0 1 - - - - 1.000 - - - - si:dkey-22h13.5, transcript variant X4
81. BX640518.1 BX640518.1 24 1 - - - - - 1.000 - - -
82. nr4a2a ENSDARG00000017007 140 1 - - - - - 1.000 - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
83. pde5ab ENSDARG00000051915 18 1 - - 1.000 - - - - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
84. zgc:153846 ENSDARG00000040738 1 1 - - - - - 1.000 - - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
85. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1 - - - - - 1.000 - - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
86. si:dkey-4c15.9 ENSDARG00000092152 1 1 - - - - 1.000 - - - - si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
87. hif1al2 ENSDARG00000044550 140 1 - - - - - 1.000 - - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
88. xpnpep2 ENSDARG00000026017 16 1 - - 1.000 - - - - - - X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound [Source:ZFIN;Acc:ZDB-GENE-040426-1151]
89. ush1g ush1g 0 1 - - - - 1.000 - - - -
90. zgc:194189 ENSDARG00000008010 26 1 - - - - 1.000 - - - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
91. NUGGC NUGGC 9 1 - - - - - 1.000 - - -
92. pcdh15b ENSDARG00000008127 2 1 - - - - - 1.000 - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
93. FP236810.3 FP236810.3 1 1 - - - - - 1.000 - - -
94. si:ch73-226l13.2 ENSDARG00000095939 0 1 - - - - - 1.000 - - - si:ch73-226l13.2 [Source:ZFIN;Acc:ZDB-GENE-110411-18]
95. CMA1_9 CMA1_9 1 1 - - - - - 1.000 - - -
96. U1_40 U1_40 0 1 - - - - 1.000 - - - -
97. FAM188B2 4 1 - - - - 1.000 - - - - family with sequence similarity 188, member B2
98. igf1 ENSDARG00000094132 59 1 - - - - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
99. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 - - 1.000 - - - - - -
100. SMC1B ENSDARG00000014402 0 1 - - - - 1.000 - - - - structural maintenance of chromosomes 1B [Source:ZFIN;Acc:ZDB-GENE-091217-1]

There are 916 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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