Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ush2a

Gene Name Gene ID Reads Annotation
ush2a ENSDARG00000029482 10 Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]










Genes with expression patterns similar to ush2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ush2a ENSDARG00000029482 10 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
2. si:ch211-93g21.1 ENSDARG00000093602 5 2 - - 1.000 - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
3. GPX2 ENSDARG00000089149 10 2 - - 1.000 - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
4. BEGAIN_1 BEGAIN_1 7 2 - - - - 1.000 1.000 - - -
5. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 2 - - - - 1.000 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
6. si:dkey-284p5.3 ENSDARG00000095638 4 2 - - 1.000 - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
7. crispld1a ENSDARG00000077275 7 2 - - 1.000 - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
8. si:ch73-366i20.1_1 ENSDARG00000092949 1 2 - - 1.000 - 1.000 - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
9. asip asip 2 2 - - - - 1.000 1.000 - - -
10. AL929092.1_1 ENSDARG00000092217 3 1.965 - - - - 1.000 - 0.965 - -
11. si:dkey-47k20.7 ENSDARG00000056014 1 1.965 - - - - - 1.000 0.965 - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
12. dao.2 ENSDARG00000035603 8 1.965 - - - - 1.000 - 0.965 - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
13. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1.965 - - - - - 1.000 0.965 - - si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
14. VSIG10L ENSDARG00000089237 12 1.919 - - 0.919 - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
15. zgc:113030 ENSDARG00000069869 53 1.898 - - - - - 1.000 0.898 - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
16. NLRC5 ENSDARG00000024631 11 1.896 - - 1.000 - - - - 0.896 - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
17. cx52.9 ENSDARG00000086453 7 1.896 - - - - 1.000 - - 0.896 - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
18. AL929092.3 AL929092.3 0 1.896 - - 1.000 - - - - 0.896 -
19. CU633740.2 CU633740.2 16 1.881 - - 0.881 - - 1.000 - - -
20. SHISA7 SHISA7 1 1.869 - - - - 1.000 - - 0.869 -
21. SYNPR ENSDARG00000037587 20 1.864 - - - - 1.000 0.864 - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
22. si:dkey-24c2.6 si:dkey-24c2.6 1 1.858 - - - - 0.858 1.000 - - -
23. CABZ01112732.1 ENSDARG00000068453 4 1.821 - - - - 0.821 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
24. gpr88 24 1.772 - - 0.772 - - 1.000 - - - G protein-coupled receptor 88
25. brinp3b ENSDARG00000075352 14 1.771 - - 1.000 - - 0.771 - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
26. zgc:165627 zgc:165627 4 1.733 - - 0.733 - 1.000 - - - -
27. CT030048.2 CT030048.2 3 1.733 - - 0.733 - 1.000 - - - -
28. si:ch211-167b20.7 si:ch211-167b20.7 3 1.729 - - 0.764 - - - 0.965 - -
29. CABZ01085177.1 ENSDARG00000104644 6 1.725 - - 1.000 - 0.725 - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
30. grapb ENSDARG00000022668 6 1.702 - - - - - 1.000 - - 0.702 GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
31. cnrip1b ENSDARG00000037337 39 1.694 - - 0.849 - - 0.845 - - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
32. C10H5orf42 C10H5orf42 5 1.629 - - 0.733 - - - - 0.896 -
33. kitb ENSDARG00000056133, ENSDARG00000113747 10 1.621 - - - - 0.725 - - 0.896 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
34. si:dkey-109j17.5 ENSDARG00000104891 2 1 - - - - - 1.000 - - - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
35. CABZ01023423.1 CABZ01023423.1 8 1 - - - - - 1.000 - - -
36. CABZ01049059.1 CABZ01049059.1 0 1 - - - - - 1.000 - - -
37. mir124-6 64 1 - - - - - 1.000 - - - microRNA 124-6
38. BRINP1 ENSDARG00000078302 0 1 - - - - 1.000 - - - - bone morphogenetic protein/retinoic acid inducible neural-specific 1 [Source:ZFIN;Acc:ZDB-GENE-130530-847]
39. SCARNA15 SCARNA15 1 1 - - 1.000 - - - - - -
40. IL4I1 IL4I1 4 1 - - - - 1.000 - - - -
41. si:ch1073-219n12.1 71 1 - - - - - 1.000 - - - si:ch1073-219n12.1, transcript variant X1
42. bdkrb1 ENSDARG00000020744 4 1 - - - - - 1.000 - - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
43. eif3bb ENSDARG00000074213 2 1 - - - - 1.000 - - - - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
44. il21r il21r 74 1 - - - - - 1.000 - - -
45. BX088603.2 ENSDARG00000099595 2 1 - - 1.000 - - - - - -
46. si:ch211-243a22.1 si:ch211-243a22.1 42 1 - - - - - 1.000 - - -
47. CR846080.4 CR846080.4 6 1 - - - - - 1.000 - - -
48. wisp2 ENSDARG00000077882 3 1 - - - - 1.000 - - - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
49. fam219b ENSDARG00000104637 3 1 - - - - 1.000 - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
50. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
51. crtac1b ENSDARG00000102517 0 1 - - 1.000 - - - - - - cartilage acidic protein 1b [Source:ZFIN;Acc:ZDB-GENE-090312-28]
52. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 1 - - - - - 1.000 - - - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
53. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - 1.000 - - - - ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
54. slc1a8a ENSDARG00000104204 1 1 - - - - - 1.000 - - - solute carrier family 1 (glutamate transporter), member 8a [Source:ZFIN;Acc:ZDB-GENE-101111-8]
55. rpz3 ENSDARG00000069728 11 1 - - - - - 1.000 - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
56. si:ch73-249k16.3 si:ch73-249k16.3 3 1 - - 1.000 - - - - - -
57. slc26a4 ENSDARG00000069431 2 1 - - 1.000 - - - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
58. nbn ENSDARG00000040303 43 1 - - - - - 1.000 - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
59. si:ch73-366i20.1 ENSDARG00000092949 0 1 - - 1.000 - - - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
60. six7 ENSDARG00000070107 140 1 - - - - - 1.000 - - - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
61. mucms1 ENSDARG00000069566 0 1 - - - - - 1.000 - - - mucin, multiple PTS and SEA group, member 1 [Source:ZFIN;Acc:ZDB-GENE-061009-17]
62. BX004879.1 BX004879.1 0 1 - - 1.000 - - - - - -
63. si:ch211-59m15.2 si:ch211-59m15.2 3 1 - - - - - 1.000 - - -
64. or111-9 ENSDARG00000092238 0 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 9 [Source:ZFIN;Acc:ZDB-GENE-010308-11]
65. gzmk ENSDARG00000028780 1 1 - - - - - 1.000 - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
66. olfcd3 ENSDARG00000068576 0 1 - - - - - 1.000 - - - olfactory receptor C family, d3 [Source:ZFIN;Acc:ZDB-GENE-050712-4]
67. si:dkey-50i6.6 ENSDARG00000099009 0 1 - - - - 1.000 - - - - si:dkey-50i6.6 [Source:ZFIN;Acc:ZDB-GENE-081104-420]
68. GABRA3 ENSDARG00000090883 5 1 - - - - - 1.000 - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
69. NCAM2 ENSDARG00000098523 2 1 - - 1.000 - - - - - - neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:7657]
70. nptx2b ENSDARG00000045164 5 1 - - - - 1.000 - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
71. RBM20 74 1 - - - - - 1.000 - - - RNA binding motif protein 20, transcript variant X1
72. sstr3 ENSDARG00000014477 14 1 - - - - 1.000 - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
73. TMEM240 TMEM240 13 1 - - - - - 1.000 - - -
74. slc2a11l ENSDARG00000062873 1 1 - - - - - 1.000 - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
75. nab2 ENSDARG00000078076 108 1 - - - - - 1.000 - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
76. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - 1.000 - - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
77. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - 1.000 - - - - - -
78. pik3ap1 ENSDARG00000078285 23 1 - - - - - 1.000 - - - phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
79. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
80. gfpt1 ENSDARG00000057465 14 1 - - - - - 1.000 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
81. HEPACAM ENSDARG00000112032 1 1 - - - - - 1.000 - - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
82. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - 1.000 - - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
83. si:dkey-115f9.3 7 1 - - - - 1.000 - - - - si:dkey-115f9.3, transcript variant X2
84. si:dkey-47k16.4 ENSDARG00000113005 87 1 - - 1.000 - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
85. guca1a ENSDARG00000010454 9 1 - - - - 1.000 - - - - guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
86. FAM188B2 4 1 - - - - 1.000 - - - - family with sequence similarity 188, member B2
87. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - 1.000 - - - - - - si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
88. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - 1.000 - - - - si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
89. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - 1.000 - - - - - - si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
90. RBM11 ENSDARG00000090202 15 1 - - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
91. si:dkey-14a7.4 si:dkey-14a7.4 5 1 - - - - 1.000 - - - -
92. si:ch211-218d20.10 si:ch211-218d20.10 4 1 - - - - 1.000 - - - -
93. mfi2 224 1 - - 1.000 - - - - - - antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5, transcript variant X2
94. r3hdm4 ENSDARG00000063254 201 1 - - - - - 1.000 - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
95. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1 - - - - - 1.000 - - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
96. ahr1b ENSDARG00000023537 44 1 - - - - - 1.000 - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
97. caspbl ENSDARG00000094433 1 1 - - - - - 1.000 - - - caspase b, like [Source:ZFIN;Acc:ZDB-GENE-090311-53]
98. slc6a11a ENSDARG00000074002 189 1 - - - - - 1.000 - - - solute carrier family 6 (neurotransmitter transporter), member 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3729]
99. mdm1 ENSDARG00000045675 64 1 - - - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
100. gyg2 ENSDARG00000033380 12 1 - - - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]

There are 916 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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