Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ush2a

Gene Name Gene ID Reads Annotation
ush2a ENSDARG00000029482 10 Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]










Genes with expression patterns similar to ush2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ush2a ENSDARG00000029482 10 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
2. si:dkey-284p5.3 ENSDARG00000095638 4 2 - - 1.000 - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
3. GPX2 ENSDARG00000089149 10 2 - - 1.000 - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
4. BEGAIN_1 BEGAIN_1 7 2 - - - - 1.000 1.000 - - -
5. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 2 - - - - 1.000 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
6. asip asip 2 2 - - - - 1.000 1.000 - - -
7. crispld1a ENSDARG00000077275 7 2 - - 1.000 - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
8. si:ch211-93g21.1 ENSDARG00000093602 5 2 - - 1.000 - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
9. si:ch73-366i20.1_1 ENSDARG00000092949 1 2 - - 1.000 - 1.000 - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
10. AL929092.1_1 ENSDARG00000092217 3 1.965 - - - - 1.000 - 0.965 - -
11. dao.2 ENSDARG00000035603 8 1.965 - - - - 1.000 - 0.965 - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
12. si:dkey-47k20.7 ENSDARG00000056014 1 1.965 - - - - - 1.000 0.965 - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
13. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1.965 - - - - - 1.000 0.965 - - si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
14. VSIG10L ENSDARG00000089237 12 1.919 - - 0.919 - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
15. zgc:113030 ENSDARG00000069869 53 1.898 - - - - - 1.000 0.898 - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
16. AL929092.3 AL929092.3 0 1.896 - - 1.000 - - - - 0.896 -
17. cx52.9 ENSDARG00000086453 7 1.896 - - - - 1.000 - - 0.896 - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
18. NLRC5 ENSDARG00000024631 11 1.896 - - 1.000 - - - - 0.896 - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
19. CU633740.2 CU633740.2 16 1.881 - - 0.881 - - 1.000 - - -
20. SHISA7 SHISA7 1 1.869 - - - - 1.000 - - 0.869 -
21. SYNPR ENSDARG00000037587 20 1.864 - - - - 1.000 0.864 - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
22. si:dkey-24c2.6 si:dkey-24c2.6 1 1.858 - - - - 0.858 1.000 - - -
23. CABZ01112732.1 ENSDARG00000068453 4 1.821 - - - - 0.821 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
24. gpr88 24 1.772 - - 0.772 - - 1.000 - - - G protein-coupled receptor 88
25. brinp3b ENSDARG00000075352 14 1.771 - - 1.000 - - 0.771 - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
26. zgc:165627 zgc:165627 4 1.733 - - 0.733 - 1.000 - - - -
27. CT030048.2 CT030048.2 3 1.733 - - 0.733 - 1.000 - - - -
28. si:ch211-167b20.7 si:ch211-167b20.7 3 1.729 - - 0.764 - - - 0.965 - -
29. CABZ01085177.1 ENSDARG00000104644 6 1.725 - - 1.000 - 0.725 - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
30. grapb ENSDARG00000022668 6 1.702 - - - - - 1.000 - - 0.702 GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
31. cnrip1b ENSDARG00000037337 39 1.694 - - 0.849 - - 0.845 - - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
32. C10H5orf42 C10H5orf42 5 1.629 - - 0.733 - - - - 0.896 -
33. kitb ENSDARG00000056133, ENSDARG00000113747 10 1.621 - - - - 0.725 - - 0.896 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
34. si:dkeyp-82a1.8 ENSDARG00000095539 6 1 - - - - - 1.000 - - - si:dkeyp-82a1.8 [Source:ZFIN;Acc:ZDB-GENE-081104-479]
35. si:dkey-106c17.2 ENSDARG00000094994, ENSDARG00000098530 14 1 - - - - 1.000 - - - - si:dkey-106c17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-612]
36. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - 1.000 - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
37. si:ch211-218d20.10 si:ch211-218d20.10 4 1 - - - - 1.000 - - - -
38. CABZ01113374.2 CABZ01113374.2 27 1 - - - - - 1.000 - - -
39. 5S_rRNA_13 5S_rRNA_13 0 1 - - 1.000 - - - - - -
40. si:ch211-255i3.4 ENSDARG00000095152 7 1 - - - - - 1.000 - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
41. C11H1orf116 C11H1orf116 9 1 - - 1.000 - - - - - -
42. SCARNA15 SCARNA15 1 1 - - 1.000 - - - - - -
43. si:dkey-219e20.2 ENSDARG00000094224 3 1 - - - - 1.000 - - - - si:dkey-219e20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-105]
44. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1 - - - - 1.000 - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
45. cnn1b ENSDARG00000102398 40 1 - - - - 1.000 - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
46. CT573234.2 CT573234.2 1 1 - - - - - 1.000 - - -
47. CIT_1 CIT_1 6 1 - - - - - 1.000 - - -
48. si:dkey-11d20.4 si:dkey-11d20.4 6 1 - - 1.000 - - - - - -
49. NOTCH2NL NOTCH2NL 5 1 - - - - 1.000 - - - -
50. snf8 ENSDARG00000058076 384 1 - - - - - 1.000 - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
51. gyg2 ENSDARG00000033380 12 1 - - - - - 1.000 - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
52. BX897747.2 BX897747.2 1 1 - - - - 1.000 - - - -
53. PCDH10 PCDH10 7 1 - - - - - 1.000 - - -
54. si:dkey-20d21.6 si:dkey-20d21.6 0 1 - - 1.000 - - - - - -
55. si:dkey-14a7.4 si:dkey-14a7.4 5 1 - - - - 1.000 - - - -
56. si:ch211-262l19.1 si:ch211-262l19.1 0 1 - - - - - 1.000 - - -
57. CABZ01049059.1 CABZ01049059.1 0 1 - - - - - 1.000 - - -
58. CMA1_9 CMA1_9 1 1 - - - - - 1.000 - - -
59. pcdh1a6 ENSDARG00000097170 6 1 - - - - 1.000 - - - - protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
60. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - - - - 1.000 - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
61. esyt1b ENSDARG00000014239 8 1 - - 1.000 - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
62. si:dkey-50i6.6 ENSDARG00000099009 0 1 - - - - 1.000 - - - - si:dkey-50i6.6 [Source:ZFIN;Acc:ZDB-GENE-081104-420]
63. U1_45 U1_45 0 1 - - 1.000 - - - - - -
64. FNDC3B FNDC3B 2 1 - - - - 1.000 - - - -
65. CABZ01079541.1 CABZ01079541.1 0 1 - - 1.000 - - - - - -
66. nid2b ENSDARG00000009471 4 1 - - - - - 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
67. si:dkey-119g10.5 si:dkey-119g10.5 1 1 - - - - 1.000 - - - -
68. sstr3 ENSDARG00000014477 14 1 - - - - 1.000 - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
69. gfpt1 ENSDARG00000057465 14 1 - - - - - 1.000 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
70. BX927317.2 ENSDARG00000101263 4 1 - - - - 1.000 - - - -
71. samd10b ENSDARG00000094377 18 1 - - - - - 1.000 - - - sterile alpha motif domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-090312-179]
72. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - 1.000 - - - - - -
73. trim35-27 ENSDARG00000035009 62 1 - - - - - - 1.000 - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
74. FCHO1 ENSDARG00000015356 2 1 - - 1.000 - - - - - - FCH domain only 1 [Source:ZFIN;Acc:ZDB-GENE-120613-1]
75. frmd3 ENSDARG00000059885 1 1 - - - - 1.000 - - - - FERM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070523-1]
76. si:dkey-23a23.1 ENSDARG00000094824 1 1 - - - - - 1.000 - - - si:dkey-23a23.1 [Source:ZFIN;Acc:ZDB-GENE-060503-65]
77. CABZ01084323.1 ENSDARG00000104937 5 1 - - - - 1.000 - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
78. six7 ENSDARG00000070107 140 1 - - - - - 1.000 - - - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
79. TMEM240 TMEM240 13 1 - - - - - 1.000 - - -
80. GBGT1_1 GBGT1_1 19 1 - - - - - 1.000 - - -
81. FAM188B2 4 1 - - - - 1.000 - - - - family with sequence similarity 188, member B2
82. CR356223.4 CR356223.4 42 1 - - - - - 1.000 - - -
83. znf536 ENSDARG00000103648 6 1 - - - - 1.000 - - - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
84. ABCD2 ENSDARG00000059409 1 1 - - 1.000 - - - - - - ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
85. CU856681.1 CU856681.1 7 1 - - - - 1.000 - - - -
86. zgc:153846 ENSDARG00000040738 1 1 - - - - - 1.000 - - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
87. FP103003.1_1 FP103003.1_1 6 1 - - - - 1.000 - - - -
88. si:dkey-162b3.5 si:dkey-162b3.5 24 1 - - - - - 1.000 - - -
89. CU929159.1 CU929159.1 0 1 - - - - - 1.000 - - -
90. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - - 1.000 - - -
91. ZNF337_14 ZNF337_14 4 1 - - - - 1.000 - - - -
92. BX004879.1 BX004879.1 0 1 - - 1.000 - - - - - -
93. si:ch73-226l13.2 ENSDARG00000095939 0 1 - - - - - 1.000 - - - si:ch73-226l13.2 [Source:ZFIN;Acc:ZDB-GENE-110411-18]
94. cdc42ep2 ENSDARG00000053959 32 1 - - - - - 1.000 - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
95. opn4a ENSDARG00000022098, ENSDARG00000110010 3 1 - - - - - 1.000 - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
96. DMXL2 ENSDARG00000091293 3 1 - - - - - 1.000 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
97. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - 1.000 - - - - vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
98. U5_6 U5_6 0 1 - - - - 1.000 - - - -
99. taf4b ENSDARG00000075732 3 1 - - - - 1.000 - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
100. CR339051.1 CR339051.1 9 1 - - - - - 1.000 - - -

There are 916 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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