Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ush2a

Gene Name Gene ID Reads Annotation
ush2a ENSDARG00000029482 10 Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]










Genes with expression patterns similar to ush2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ush2a ENSDARG00000029482 10 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
2. si:ch73-366i20.1_1 ENSDARG00000092949 1 2 - - 1.000 - 1.000 - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
3. si:ch211-93g21.1 ENSDARG00000093602 5 2 - - 1.000 - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
4. crispld1a ENSDARG00000077275 7 2 - - 1.000 - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
5. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 2 - - - - 1.000 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
6. BEGAIN_1 BEGAIN_1 7 2 - - - - 1.000 1.000 - - -
7. asip asip 2 2 - - - - 1.000 1.000 - - -
8. si:dkey-284p5.3 ENSDARG00000095638 4 2 - - 1.000 - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
9. GPX2 ENSDARG00000089149 10 2 - - 1.000 - 1.000 - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100334384]
10. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1.965 - - - - - 1.000 0.965 - - si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
11. si:dkey-47k20.7 ENSDARG00000056014 1 1.965 - - - - - 1.000 0.965 - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
12. dao.2 ENSDARG00000035603 8 1.965 - - - - 1.000 - 0.965 - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
13. AL929092.1_1 ENSDARG00000092217 3 1.965 - - - - 1.000 - 0.965 - -
14. VSIG10L ENSDARG00000089237 12 1.919 - - 0.919 - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
15. zgc:113030 ENSDARG00000069869 53 1.898 - - - - - 1.000 0.898 - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
16. NLRC5 ENSDARG00000024631 11 1.896 - - 1.000 - - - - 0.896 - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
17. AL929092.3 AL929092.3 0 1.896 - - 1.000 - - - - 0.896 -
18. cx52.9 ENSDARG00000086453 7 1.896 - - - - 1.000 - - 0.896 - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
19. CU633740.2 CU633740.2 16 1.881 - - 0.881 - - 1.000 - - -
20. SHISA7 SHISA7 1 1.869 - - - - 1.000 - - 0.869 -
21. SYNPR ENSDARG00000037587 20 1.864 - - - - 1.000 0.864 - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
22. si:dkey-24c2.6 si:dkey-24c2.6 1 1.858 - - - - 0.858 1.000 - - -
23. CABZ01112732.1 ENSDARG00000068453 4 1.821 - - - - 0.821 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
24. gpr88 24 1.772 - - 0.772 - - 1.000 - - - G protein-coupled receptor 88
25. brinp3b ENSDARG00000075352 14 1.771 - - 1.000 - - 0.771 - - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
26. CT030048.2 CT030048.2 3 1.733 - - 0.733 - 1.000 - - - -
27. zgc:165627 zgc:165627 4 1.733 - - 0.733 - 1.000 - - - -
28. si:ch211-167b20.7 si:ch211-167b20.7 3 1.729 - - 0.764 - - - 0.965 - -
29. CABZ01085177.1 ENSDARG00000104644 6 1.725 - - 1.000 - 0.725 - - - - transcription factor IIIB 50 kDa subunit-like [Source:NCBI gene;Acc:100536580]
30. grapb ENSDARG00000022668 6 1.702 - - - - - 1.000 - - 0.702 GRB2 related adaptor protein b [Source:ZFIN;Acc:ZDB-GENE-050913-4]
31. cnrip1b ENSDARG00000037337 39 1.694 - - 0.849 - - 0.845 - - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
32. C10H5orf42 C10H5orf42 5 1.629 - - 0.733 - - - - 0.896 -
33. kitb ENSDARG00000056133, ENSDARG00000113747 10 1.621 - - - - 0.725 - - 0.896 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
34. adkb_1 ENSDARG00000095947 109 1 - - - - 1.000 - - - - adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948]
35. ENSDARG00000087581 ENSDARG00000087581 2 1 - - 1.000 - - - - - -
36. igf1 ENSDARG00000094132 59 1 - - - - - 1.000 - - - insulin-like growth factor 1 [Source:ZFIN;Acc:ZDB-GENE-010607-2]
37. fam19a1 7 1 - - - - 1.000 - - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
38. ankrd52a ENSDARG00000036826, ENSDARG00000112185 7 1 - - - - - 1.000 - - - ankyrin repeat domain 52a [Source:ZFIN;Acc:ZDB-GENE-050522-247]
39. zgc:172253 ENSDARG00000074191 5 1 - - - - 1.000 - - - - zgc:172253 [Source:ZFIN;Acc:ZDB-GENE-080215-9]
40. si:ch211-161n3.4 ENSDARG00000045752 0 1 - - 1.000 - - - - - - si:ch211-161n3.4 [Source:ZFIN;Acc:ZDB-GENE-110913-46]
41. slc26a4 ENSDARG00000069431 2 1 - - 1.000 - - - - - - solute carrier family 26 (anion exchanger), member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-544]
42. NUGGC NUGGC 9 1 - - - - - 1.000 - - -
43. si:ch211-207e7.1 si:ch211-207e7.1 33 1 - - - - - 1.000 - - -
44. CABZ01053617.1 CABZ01053617.1 5 1 - - - - - 1.000 - - -
45. RBM20 74 1 - - - - - 1.000 - - - RNA binding motif protein 20, transcript variant X1
46. PPAPDC3 PPAPDC3 14 1 - - - - - 1.000 - - -
47. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - 1.000 - - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
48. C24H8orf34 C24H8orf34 1 1 - - - - - 1.000 - - -
49. CABZ01056274.1 CABZ01056274.1 3 1 - - - - 1.000 - - - -
50. CABZ01112877.1 CABZ01112877.1 2 1 - - - - 1.000 - - - -
51. rnf165a ENSDARG00000077906 133 1 - - - - - 1.000 - - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
52. arhgap23b ENSDARG00000026840 6 1 - - - - - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
53. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
54. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - - 1.000 - - - - - -
55. BX927122.3 BX927122.3 19 1 - - - - - 1.000 - - -
56. si:dkey-111e8.2 si:dkey-111e8.2 0 1 - - - - - 1.000 - - -
57. socs1a ENSDARG00000038095 20 1 - - - - 1.000 - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
58. DIP2B DIP2B 18 1 - - - - - 1.000 - - -
59. lratb 3 1 - - 1.000 - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
60. aqp10a ENSDARG00000007086, ENSDARG00000112181 8 1 - - - - 1.000 - - - - aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40]
61. pde5ab ENSDARG00000051915 18 1 - - 1.000 - - - - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
62. zgc:158321 zgc:158321 1 1 - - - - 1.000 - - - -
63. si:ch73-138e16.6 ENSDARG00000101044 2 1 - - - - 1.000 - - - - si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205]
64. ftr43 ENSDARG00000076106 2 1 - - - - 1.000 - - - - finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8]
65. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - 1.000 - - - - - - si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
66. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 - - - - - 1.000 - - -
67. aptx ENSDARG00000027143 87 1 - - - - - 1.000 - - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
68. SMC1B ENSDARG00000014402 0 1 - - - - 1.000 - - - - structural maintenance of chromosomes 1B [Source:ZFIN;Acc:ZDB-GENE-091217-1]
69. ENSDARG00000086059 ENSDARG00000086059 9 1 - - - - - 1.000 - - -
70. si:dkey-176g4.5 si:dkey-176g4.5 4 1 - - - - 1.000 - - - -
71. htr1bd htr1bd 8 1 - - - - - 1.000 - - -
72. ftr03 8 1 - - - - 1.000 - - - - finTRIM family, member 3
73. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - 1.000 - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
74. ft2 ENSDARG00000109567 5 1 - - - - 1.000 - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
75. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - 1.000 - - - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
76. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
77. RNF151 ENSDARG00000075046, ENSDARG00000115743 3 1 - - 1.000 - - - - - - ring finger protein 151 [Source:ZFIN;Acc:ZDB-GENE-121214-234]
78. leprel4 leprel4 34 1 - - - - - 1.000 - - -
79. CR848025.1 ENSDARG00000100501 35 1 - - - - 1.000 - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
80. si:dkeyp-104b3.21 ENSDARG00000103964 6 1 - - - - - 1.000 - - - si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
81. PLEKHD1 ENSDARG00000091349 0 1 - - 1.000 - - - - - - pleckstrin homology domain containing, family D (with coiled-coil domains) member 1 [Source:ZFIN;Acc:ZDB-GENE-130926-1]
82. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1 - - - - - 1.000 - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
83. PHKA1 PHKA1 10 1 - - - - - 1.000 - - -
84. si:dkey-63d15.12 ENSDARG00000075480 9 1 - - - - - 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
85. rrh ENSDARG00000039534 4 1 - - - - - 1.000 - - - retinal pigment epithelium-derived rhodopsin homolog [Source:ZFIN;Acc:ZDB-GENE-040912-94]
86. r3hdm4 ENSDARG00000063254 201 1 - - - - - 1.000 - - - R3H domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1352]
87. si:ch211-229o8.4 si:ch211-229o8.4 1 1 - - - - - 1.000 - - -
88. CABZ01090980.1 CABZ01090980.1 6 1 - - - - 1.000 - - - -
89. zp2.5 ENSDARG00000086522 15 1 - - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
90. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - 1.000 - - - -
91. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -
92. sh2d4b sh2d4b 1 1 - - - - - 1.000 - - -
93. otogl ENSDARG00000088750 2 1 - - - - 1.000 - - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]
94. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - 1.000 - - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
95. wu:fe37d09 wu:fe37d09 0 1 - - 1.000 - - - - - -
96. zgc:153654 ENSDARG00000060322 9 1 - - - - 1.000 - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
97. th2 ENSDARG00000038384 1 1 - - - - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
98. CABZ01023424.1 CABZ01023424.1 0 1 - - 1.000 - - - - - -
99. ZNF541 ENSDARG00000052188 0 1 - - - - - 1.000 - - - zinc finger protein 541 [Source:ZFIN;Acc:ZDB-GENE-060526-239]
100. si:dkey-40n15.1 ENSDARG00000116117 1 1 - - - - - 1.000 - - - si:dkey-40n15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-64]

There are 916 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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