Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for usf2

Gene Name Gene ID Reads Annotation
usf2 ENSDARG00000020228 2667 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]










Genes with expression patterns similar to usf2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. usf2 ENSDARG00000020228 2667 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
2. golga7 ENSDARG00000057676 4691 3.244 0.866 0.757 - - 0.903 - - - 0.718 golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
3. ppp1cb ENSDARG00000044153 4748 2.546 - 0.796 - - 0.947 0.803 - - - protein phosphatase 1, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-030616-609]
4. lrrfip2 ENSDARG00000010400 2633 2.541 0.826 0.723 - - 0.992 - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
5. fam129ba ENSDARG00000062970 1578 2.482 0.783 0.721 - - 0.978 - - - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
6. tcea1 ENSDARG00000003531 2912 2.396 0.741 - - - 0.942 - - - 0.713 transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
7. pbx2 ENSDARG00000019717 6892 2.394 - - - - 0.872 0.792 0.730 - - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
8. pcdh10a ENSDARG00000099729 2214 2.374 - 0.741 - - 0.867 - - 0.766 - protocadherin 10a [Source:ZFIN;Acc:ZDB-GENE-020731-1]
9. arpp19b ENSDARG00000039880 4823 2.356 - - - - 0.845 - 0.794 - 0.717 cAMP-regulated phosphoprotein 19b [Source:ZFIN;Acc:ZDB-GENE-040426-930]
10. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 2.346 - 0.759 - - - - 0.786 0.801 - membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
11. ISCU ISCU 3648 2.265 0.751 0.787 - - - - 0.727 - -
12. G3BP2_1 G3BP2_1 2390 2.262 0.725 - - - - 0.746 0.791 - -
13. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.24 0.726 - - - - - 0.752 - 0.762 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
14. pi4kb ENSDARG00000040111, ENSDARG00000111175 2132 2.188 - 0.737 - - - - 0.712 0.739 - phosphatidylinositol 4-kinase, catalytic, beta [Source:ZFIN;Acc:ZDB-GENE-061013-96]
15. znf362 znf362 869 1.816 - - - - 0.985 - - 0.831 -
16. KIF1A KIF1A 1686 1.794 - - - - 0.980 0.814 - - -
17. CASKIN2_1 CASKIN2_1 2299 1.781 0.798 - - - 0.983 - - - -
18. smg7 ENSDARG00000060767 2759 1.769 - - - - 0.972 0.797 - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
19. nop10 ENSDARG00000104227 2463 1.759 0.823 - - - 0.936 - - - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
20. taf11 ENSDARG00000037855 2624 1.753 - 0.797 - - 0.956 - - - - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
21. zgc:92664 ENSDARG00000015161 1651 1.744 - - - - 0.981 - - 0.763 - zgc:92664 [Source:ZFIN;Acc:ZDB-GENE-040718-119]
22. mcrs1 ENSDARG00000020840 3232 1.734 - - - - 0.968 - 0.766 - - microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
23. her4.3 ENSDARG00000070770 613 1.733 - - - 0.740 0.993 - - - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
24. C6H6orf106 C6H6orf106 2940 1.73 0.913 0.817 - - - - - - -
25. CBFA2T3 ENSDARG00000079012 6799 1.726 0.927 - - - 0.799 - - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
26. rtfdc1 1792 1.71 - - - - 0.978 - 0.732 - - replication termination factor 2 domain containing 1, transcript variant X2
27. aatkb ENSDARG00000104442 392 1.709 - - - - 0.992 - - 0.717 - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
28. zgc:111974 zgc:111974 1386 1.703 0.719 - - - 0.984 - - - -
29. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.699 0.724 - - - 0.975 - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
30. gpcpd1 ENSDARG00000016011 2563 1.693 0.852 0.841 - - - - - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
31. ezh2 ENSDARG00000010571 3273 1.688 - - - - 0.937 - - - 0.751 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
32. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.688 - - - - 0.929 - 0.759 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
33. znf143a ENSDARG00000012887 1393 1.685 - - - 0.707 0.978 - - - - zinc finger protein 143a [Source:ZFIN;Acc:ZDB-GENE-041114-154]
34. med23 ENSDARG00000029157 4453 1.68 - - - - 0.979 - 0.701 - - mediator complex subunit 23 [Source:ZFIN;Acc:ZDB-GENE-040724-82]
35. ide ENSDARG00000075570 4331 1.678 - - - - 0.918 - 0.760 - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
36. acacb ENSDARG00000061994 1886 1.673 - - - - 0.971 - 0.702 - - acetyl-CoA carboxylase beta [Source:ZFIN;Acc:ZDB-GENE-060526-132]
37. otud5a ENSDARG00000059006 2073 1.668 0.840 - - - - - - 0.828 - OTU deubiquitinase 5a [Source:ZFIN;Acc:ZDB-GENE-030616-61]
38. mad2l1 ENSDARG00000004713 3398 1.657 0.879 0.778 - - - - - - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
39. TSSC4 ENSDARG00000036144 1994 1.654 0.812 0.842 - - - - - - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
40. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.652 - - - 0.754 0.898 - - - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
41. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 1.65 0.924 0.726 - - - - - - - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
42. zfand5b ENSDARG00000002271 4145 1.64 - - - - 0.857 - 0.783 - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
43. tax1bp3 ENSDARG00000059177 4324 1.632 0.869 0.763 - - - - - - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
44. tiam1a ENSDARG00000078430 2482 1.626 0.864 0.762 - - - - - - - T cell lymphoma invasion and metastasis 1a [Source:ZFIN;Acc:ZDB-GENE-080325-1]
45. cab39l1 ENSDARG00000021374, ENSDARG00000112995 2033 1.624 0.805 - - - - - 0.819 - - calcium binding protein 39, like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2897]
46. UBE2S ENSDARG00000031775, ENSDARG00000114827 1890 1.623 0.890 - - - - - - - 0.733 ubiquitin-conjugating enzyme E2S [Source:ZFIN;Acc:ZDB-GENE-050913-92]
47. psma8 ENSDARG00000010965 8321 1.617 0.901 0.716 - - - - - - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
48. orc6 ENSDARG00000075682 1382 1.613 - - - - - - 0.745 0.868 - origin recognition complex, subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2976]
49. ing4 ENSDARG00000030716 5908 1.612 0.890 0.722 - - - - - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
50. map3k7 ENSDARG00000020469 2845 1.611 0.894 0.717 - - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
51. ap3m2 ENSDARG00000016128 851 1.608 0.784 - - - - - - 0.824 - adaptor related protein complex 3 subunit mu 2 [Source:ZFIN;Acc:ZDB-GENE-021022-2]
52. rhov ENSDARG00000070434 808 1.604 0.862 0.742 - - - - - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
53. lmnb1 ENSDARG00000044299 9817 1.596 0.892 - - - 0.704 - - - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
54. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.595 - 0.750 - - 0.845 - - - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
55. ktn1 ENSDARG00000032802 6251 1.587 0.849 - - - - - 0.738 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
56. zgc:91910 ENSDARG00000035678 6172 1.586 - - - - - 0.812 0.774 - - zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
57. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.583 - 0.841 - - - - 0.742 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
58. Sep-06 Sep-06 5465 1.57 0.798 - - - - - - - 0.772
59. mrpl37 ENSDARG00000062916 1600 1.569 0.845 - - - - - - 0.724 - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
60. snrpb ENSDARG00000011125 11729 1.561 - - - - 0.857 0.704 - - - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
61. LONRF2 LONRF2 721 1.559 0.840 - - 0.719 - - - - -
62. TRIM14 TRIM14 1424 1.553 0.804 0.749 - - - - - - -
63. igdcc3 ENSDARG00000075158 1921 1.552 - - - - - - - 0.790 0.762 immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]
64. yth2 yth2 3716 1.551 0.839 - - - - - 0.712 - -
65. psmb2 ENSDARG00000031511 4016 1.548 0.760 0.788 - - - - - - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
66. eif2s1a ENSDARG00000005827 5992 1.545 0.729 - - - - - 0.816 - - eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
67. lbr ENSDARG00000014013 4835 1.54 0.834 - - - - - 0.706 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
68. tmed7 ENSDARG00000046022 2435 1.539 0.819 0.720 - - - - - - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
69. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 1.538 - - - - - 0.800 0.738 - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
70. mgst3 mgst3 3982 1.531 - 0.817 - - - - 0.714 - -
71. mxd3 ENSDARG00000098350 3040 1.528 - - - - - 0.827 - - 0.701 MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
72. clic4 ENSDARG00000022995 6064 1.525 - 0.730 - - - 0.795 - - - chloride intracellular channel 4 [Source:ZFIN;Acc:ZDB-GENE-030326-3]
73. KIAA0355 3250 1.525 0.790 0.735 - - - - - - - KIAA0355 ortholog, transcript variant X1
74. PWWP2A ENSDARG00000075526 2163 1.521 - - - - - 0.798 - - 0.723 PWWP domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-131120-4]
75. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.518 0.714 - - - - 0.804 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
76. arl14ep ENSDARG00000001210 3029 1.516 - - - 0.756 - - 0.760 - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
77. anp32a ENSDARG00000006487 28249 1.514 - - - - - 0.764 0.750 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
78. ddx56 ENSDARG00000020913 1070 1.514 - 0.761 - - - - - 0.753 - DEAD (Asp-Glu-Ala-Asp) box helicase 56 [Source:ZFIN;Acc:ZDB-GENE-040825-3]
79. magt1 ENSDARG00000058062 3903 1.511 0.742 - - - - 0.769 - - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
80. srp68 ENSDARG00000020820 1719 1.509 - - - 0.736 - - 0.773 - - signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
81. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.509 - - - - - 0.762 0.747 - - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
82. h2afy2_1 ENSDARG00000087897 9887 1.508 0.751 - - - - 0.757 - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
83. akt2 ENSDARG00000011219 647 1.5 - - - 0.705 - - - 0.795 - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
84. mcmbp ENSDARG00000055314 731 1.5 - - - 0.703 - - - 0.797 - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
85. rnf44 ENSDARG00000068582 1612 1.5 - - - - - - 0.720 0.780 - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
86. ywhae2 ENSDARG00000017014 5105 1.491 0.734 0.757 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
87. sec61al2 sec61al2 4551 1.49 - - - - - 0.781 0.709 - -
88. tom1 ENSDARG00000104581 1457 1.49 0.751 - - - - 0.739 - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
89. FNBP4 ENSDARG00000051800 2839 1.49 - - - - - - 0.765 - 0.725 formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
90. si:ch211-286b5.5 ENSDARG00000096661 3136 1.484 0.747 - - - - - 0.737 - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
91. actl6a ENSDARG00000070828, ENSDARG00000115348 1961 1.483 - - - - - - 0.770 - 0.713 actin-like 6A [Source:ZFIN;Acc:ZDB-GENE-020419-36]
92. FOXK2 ENSDARG00000030583 5500 1.481 - 0.762 - - - - 0.719 - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
93. zgc:100918 ENSDARG00000087243 5451 1.479 - 0.770 - - - 0.709 - - - zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
94. nrip1b ENSDARG00000068894 2699 1.476 0.702 - - - - 0.774 - - - nuclear receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4173]
95. phf21ab ENSDARG00000021378 1706 1.474 - 0.765 - - - - - - 0.709 PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
96. med12 ENSDARG00000103953, ENSDARG00000109815, ENSDARG00000116469 1894 1.469 - - - - - 0.752 - - 0.717 mediator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-060125-1]
97. RBM6 ENSDARG00000077060 3521 1.467 0.724 - - - - - 0.743 - - RNA binding motif protein 6 [Source:ZFIN;Acc:ZDB-GENE-050309-79]
98. map2k2a ENSDARG00000006609 856 1.463 0.739 0.724 - - - - - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
99. C22H6orf89 C22H6orf89 1076 1.462 - 0.741 - - - - - 0.721 -
100. mcm2 ENSDARG00000102798 8148 1.457 - - - - - - - 0.756 0.701 minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]

There are 1301 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA