Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for urod

Gene Name Gene ID Reads Annotation
urod ENSDARG00000006818 856 uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]










Genes with expression patterns similar to urod

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. urod ENSDARG00000006818 856 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 uroporphyrinogen decarboxylase [Source:ZFIN;Acc:ZDB-GENE-000208-18]
2. si:busm1-118j2.5 si:busm1-118j2.5 10462 3.418 - 0.884 0.876 0.827 0.831 - - - -
3. hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 3.357 - 0.865 0.863 0.809 0.820 - - - - hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
4. gata1a ENSDARG00000013477, ENSDARG00000117116 902 3.144 - 0.849 0.796 0.771 0.728 - - - - GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
5. hbae3 ENSDARG00000079305 100050 3.068 - 0.712 0.737 0.798 0.821 - - - - hemoglobin alpha embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-990706-3]
6. slc4a1a ENSDARG00000012881 8972 2.602 - 0.917 0.883 0.802 - - - - - solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
7. hbae1_1 37308 2.519 - 0.866 0.860 - 0.793 - - - - hemoglobin, alpha embryonic 1
8. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 2.509 - 0.856 0.836 0.817 - - - - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
9. epb41b ENSDARG00000029019 1472 2.406 - 0.855 0.822 - 0.729 - - - - erythrocyte membrane protein band 4.1b [Source:ZFIN;Acc:ZDB-GENE-030130-1]
10. cahz ENSDARG00000011166 5771 2.405 - 0.815 0.806 - 0.784 - - - - carbonic anhydrase [Source:ZFIN;Acc:ZDB-GENE-980526-39]
11. hbae1 14666 2.378 - 0.722 0.841 - 0.815 - - - - hemoglobin, alpha embryonic 1
12. AL935210.1 ENSDARG00000088330 24618 2.371 - - 0.823 0.775 0.773 - - - - hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
13. nt5c2l1 ENSDARG00000034852 1014 2.368 - 0.869 0.760 0.739 - - - - - 5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]
14. hbbe1.1 ENSDARG00000113599 64815 2.344 - 0.822 - 0.774 0.748 - - - - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
15. hbz 327 2.258 - 0.722 0.771 0.765 - - - - - hemoglobin subunit zeta
16. hbbe1.1_1 ENSDARG00000113599 31704 2.248 - - 0.714 0.761 0.773 - - - - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
17. nmt1b ENSDARG00000057206 654 2.225 - 0.708 0.742 - 0.775 - - - - N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
18. hmbsa ENSDARG00000008840 2601 2.215 - 0.770 0.712 0.733 - - - - - hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]
19. SLC2A4RG SLC2A4RG 47 1.745 - 0.807 - - - 0.938 - - -
20. ssr1 ENSDARG00000101627 151 1.686 - 0.748 - - - 0.938 - - - signal sequence receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-030826-28]
21. fpr1 ENSDARG00000042984 66 1.625 - - - - - 0.869 0.756 - - formyl peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-121227-2]
22. si:dkey-25o16.2 1990 1.596 - 0.819 0.777 - - - - - - si:dkey-25o16.2, transcript variant X1
23. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.594 - 0.802 - - - 0.792 - - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
24. hmbsb ENSDARG00000055991 3037 1.591 - 0.797 0.794 - - - - - - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
25. hunk ENSDARG00000091317 241 1.574 - 0.707 - - - 0.867 - - - hormonally up-regulated Neu-associated kinase [Source:ZFIN;Acc:ZDB-GENE-050309-240]
26. si:ch211-245n8.4 ENSDARG00000096222 230 1.56 - - - - - 0.844 0.716 - - si:ch211-245n8.4 [Source:ZFIN;Acc:ZDB-GENE-110914-56]
27. HBQ1 HBQ1 413 1.544 - 0.760 0.784 - - - - - -
28. ppox ENSDARG00000102167 929 1.543 - 0.774 0.769 - - - - - - protoporphyrinogen oxidase [Source:ZFIN;Acc:ZDB-GENE-051120-90]
29. zgc:162913 zgc:162913 155 1.532 - 0.815 - - - 0.717 - - -
30. CABZ01044943.1 CABZ01044943.1 309 1.518 - 0.800 - - - 0.718 - - -
31. si:ch211-198n5.11 ENSDARG00000054400, ENSDARG00000112640 97 1.485 - - - - - 0.757 0.728 - - si:ch211-198n5.11 [Source:ZFIN;Acc:ZDB-GENE-050411-52]
32. cbx2 ENSDARG00000044938 1576 1.465 - 0.734 - - - 0.731 - - - chromobox homolog 2 (Drosophila Pc class) [Source:ZFIN;Acc:ZDB-GENE-030131-5502]
33. blvrb ENSDARG00000096829 3296 1.439 - - 0.724 0.715 - - - - - biliverdin reductase B [Source:ZFIN;Acc:ZDB-GENE-030131-1516]
34. epor_1 ENSDARG00000090834 366 1.434 - 0.719 - 0.715 - - - - - erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
35. mctp2b ENSDARG00000073970 238 1.431 - - - 0.701 - 0.730 - - - multiple C2 domains, transmembrane 2b [Source:ZFIN;Acc:ZDB-GENE-050506-136]
36. sars2 ENSDARG00000102736 206 1.427 - 0.725 - - - 0.702 - - - seryl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-1616]
37. agk ENSDARG00000009837, ENSDARG00000113514 811 0.97 - 0.970 - - - - - - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
38. kdelc1 ENSDARG00000031971, ENSDARG00000109619, ENSDARG00000112803 249 0.97 - - - - - 0.970 - - - KDEL (Lys-Asp-Glu-Leu) containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-878]
39. GPR97 GPR97 9 0.958 - - - - - 0.958 - - -
40. azi1_1 azi1_1 1375 0.958 - - - - - 0.958 - - -
41. crfb12 ENSDARG00000052413 47 0.958 - - - - - 0.958 - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
42. BX950859.2 BX950859.2 10 0.954 - - - - - 0.954 - - -
43. pcdh7b ENSDARG00000060610 400 0.954 - 0.954 - - - - - - - protocadherin 7b [Source:ZFIN;Acc:ZDB-GENE-081104-299]
44. setd1ba ENSDARG00000060847, ENSDARG00000111265 146 0.948 - - - - - 0.948 - - - SET domain containing 1B, a [Source:ZFIN;Acc:ZDB-GENE-050309-289]
45. muc13a ENSDARG00000069559 985 0.948 - - - - - 0.948 - - - mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
46. si:dkey-11f4.20 ENSDARG00000100887 38 0.946 - - - - - 0.946 - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
47. CABZ01045230.1 CABZ01045230.1 158 0.946 - - - - - 0.946 - - -
48. syne2a 63 0.946 - - - - - 0.946 - - - spectrin repeat containing, nuclear envelope 2a
49. angpt2b ENSDARG00000053906 19 0.941 - - - - - 0.941 - - - angiopoietin 2b [Source:ZFIN;Acc:ZDB-GENE-010817-2]
50. AMDHD1 ENSDARG00000007366 89 0.94 - - - - - 0.940 - - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
51. si:ch211-119c24.1 si:ch211-119c24.1 17 0.94 - - - - - 0.940 - - -
52. vax2 ENSDARG00000058702 175 0.94 - - - - - 0.940 - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
53. si:dkey-229d11.3 ENSDARG00000093255 41 0.938 - - - - - 0.938 - - - si:dkey-229d11.3 [Source:ZFIN;Acc:ZDB-GENE-091117-40]
54. gabrr2b ENSDARG00000014057 9 0.938 - - - - - 0.938 - - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
55. ptprua ENSDARG00000092638 479 0.938 - - - - - 0.938 - - - protein tyrosine phosphatase, receptor type, U, a [Source:ZFIN;Acc:ZDB-GENE-060503-232]
56. PLEKHS1_2 PLEKHS1_2 21 0.938 - - - - - 0.938 - - -
57. bend5 ENSDARG00000075624 10 0.938 - - - - - 0.938 - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
58. si:ch211-212k5.2 si:ch211-212k5.2 152 0.938 - - - - - 0.938 - - -
59. 5_8S_rRNA 5_8S_rRNA 24 0.938 - - - - - 0.938 - - -
60. CABZ01118004.1 ENSDARG00000117218 2 0.938 - - - - - 0.938 - - -
61. BX004785.2 ENSDARG00000093487 10 0.938 - - - - - 0.938 - - -
62. trpc2 trpc2 10 0.938 - - - - - 0.938 - - -
63. neurod6b ENSDARG00000020794 164 0.938 - - - - - 0.938 - - - neuronal differentiation 6b [Source:ZFIN;Acc:ZDB-GENE-010608-2]
64. abhd6b ENSDARG00000070894, ENSDARG00000111140 5 0.938 - - - - - 0.938 - - - abhydrolase domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-070410-104]
65. scospondin ENSDARG00000067859 4 0.938 - - - - - 0.938 - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
66. iffo1a ENSDARG00000062976 5 0.938 - - - - - 0.938 - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
67. CT583679.1 CT583679.1 11 0.938 - - - - - 0.938 - - -
68. itln3 ENSDARG00000003523 3 0.938 - - - - - 0.938 - - - intelectin 3 [Source:ZFIN;Acc:ZDB-GENE-090527-4]
69. PLEKHG3 72 0.938 - - - - - 0.938 - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
70. CR790363.1 ENSDARG00000097364 145 0.938 - - - - - 0.938 - - -
71. si:dkey-94e7.2 ENSDARG00000068474 14 0.938 - - - - - 0.938 - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
72. SDSL ENSDARG00000074698 34 0.938 - - - - - 0.938 - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
73. CABZ01085657.1 CABZ01085657.1 23 0.938 - - - - - 0.938 - - -
74. sybu ENSDARG00000060112 22 0.938 - - - - - 0.938 - - - syntabulin (syntaxin-interacting) [Source:ZFIN;Acc:ZDB-GENE-060929-1202]
75. si:dkey-9i23.6 ENSDARG00000094678 58 0.938 - - - - - 0.938 - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
76. tmem196b ENSDARG00000090140 20 0.938 - - - - - 0.938 - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
77. SLC1A7 SLC1A7 3 0.938 - - - - - 0.938 - - -
78. zgc:174696 ENSDARG00000110658 67 0.938 - - - - - 0.938 - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
79. rpn2 ENSDARG00000009724 322 0.938 - - - - - 0.938 - - - ribophorin II [Source:ZFIN;Acc:ZDB-GENE-030131-7928]
80. BX571881.1 BX571881.1 2 0.938 - - - - - 0.938 - - -
81. SLC22A7 SLC22A7 3 0.938 - - - - - 0.938 - - -
82. si:dkey-197d18.3 si:dkey-197d18.3 7 0.938 - - - - - 0.938 - - -
83. si:dkey-279j5.1 ENSDARG00000101459 17 0.938 - - - - - 0.938 - - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
84. si:rp71-1h20.5 ENSDARG00000098176 3 0.938 - - - - - 0.938 - - - si:rp71-1h20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7869]
85. agmo ENSDARG00000025595 42 0.938 - - - - - 0.938 - - - alkylglycerol monooxygenase [Source:ZFIN;Acc:ZDB-GENE-040426-2207]
86. pde11al ENSDARG00000006151 70 0.938 - - - - - 0.938 - - - phosphodiesterase 11a, like [Source:ZFIN;Acc:ZDB-GENE-031118-106]
87. C11H1orf116 C11H1orf116 9 0.938 - - - - - 0.938 - - -
88. BX649415.1 BX649415.1 5 0.938 - - - - - 0.938 - - -
89. si:ch211-215m21.11 si:ch211-215m21.11 2 0.938 - - - - - 0.938 - - -
90. prdm2a ENSDARG00000090721 11 0.938 - - - - - 0.938 - - - PR domain containing 2, with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-081104-139]
91. pde6c ENSDARG00000100397 49 0.938 - - - - - 0.938 - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
92. mxd ENSDARG00000023369 8 0.938 - - - - - 0.938 - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
93. BX005085.3 ENSDARG00000103450 45 0.938 - - - - - 0.938 - - -
94. exoc4 ENSDARG00000004336 32 0.938 - - - - - 0.938 - - - exocyst complex component 4 [Source:ZFIN;Acc:ZDB-GENE-041210-112]
95. sowahaa ENSDARG00000077861 3 0.938 - - - - - 0.938 - - - sosondowah ankyrin repeat domain family member Aa [Source:ZFIN;Acc:ZDB-GENE-100910-3]
96. CABZ01092722.1 CABZ01092722.1 2 0.938 - - - - - 0.938 - - -
97. CR677591.1 CR677591.1 19 0.938 - - - - - 0.938 - - -
98. slc27a6 ENSDARG00000046053 57 0.938 - - - - - 0.938 - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
99. nkiras2_1 ENSDARG00000052594 31 0.938 - - - - - 0.938 - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
100. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 0.938 - - - - - 0.938 - - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]

There are 1003 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA