Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for urm1

Gene Name Gene ID Reads Annotation
urm1 ENSDARG00000091198, ENSDARG00000111234 1213 ubiquitin related modifier 1 [Source:ZFIN;Acc:ZDB-GENE-091204-300]










Genes with expression patterns similar to urm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. urm1 ENSDARG00000091198, ENSDARG00000111234 1213 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin related modifier 1 [Source:ZFIN;Acc:ZDB-GENE-091204-300]
2. commd5 ENSDARG00000029660 517 1.817 - 0.998 - - - - - 0.819 - COMM domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040801-71]
3. zgc:91910 ENSDARG00000035678 6172 1.792 - 0.991 - - - - 0.801 - - zgc:91910 [Source:ZFIN;Acc:ZDB-GENE-040808-48]
4. mt-nd6 ENSDARG00000063922 788 1.782 - 0.997 - - - - 0.785 - - NADH dehydrogenase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-13]
5. si:dkey-153m14.1 si:dkey-153m14.1 4591 1.759 - 0.996 - - - - 0.763 - -
6. yif1a ENSDARG00000019636 2215 1.732 - 0.992 - - - - - 0.740 - Yip1 interacting factor homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6922]
7. HOMEZ HOMEZ 1824 1.731 - 0.997 - - - - 0.734 - -
8. IM:7163548 IM:7163548 6540 1.725 - 0.995 - - - - 0.730 - -
9. mrps6 ENSDARG00000039543 1892 1.708 - 0.997 - - - 0.711 - - - mitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
10. cpsf3 ENSDARG00000027649 6897 1.707 - 0.968 - - - - 0.739 - - cleavage and polyadenylation specific factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3275]
11. si:ch211-286b5.5 ENSDARG00000096661 3136 1.706 - 0.996 - - - - 0.710 - - si:ch211-286b5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-209]
12. zgc:109868 zgc:109868 7474 1.673 - 0.931 - - 0.742 - - - -
13. C22H10orf76 C22H10orf76 1103 1.559 0.828 - - - - 0.731 - - -
14. akt1s1 ENSDARG00000074667 3795 1.529 0.737 - - - - - 0.792 - - AKT1 substrate 1 (proline-rich) [Source:ZFIN;Acc:ZDB-GENE-030131-482]
15. RBM33 RBM33 1954 1.463 - - - - - 0.709 0.754 - -
16. api5 ENSDARG00000033597 6655 1.426 - 0.725 - - - - 0.701 - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
17. polr2gl ENSDARG00000056127 1771 1.425 - - - - - 0.722 0.703 - - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
18. mff ENSDARG00000053753 905 0.998 - 0.998 - - - - - - - mitochondrial fission factor [Source:ZFIN;Acc:ZDB-GENE-040426-1510]
19. mir205 2147 0.998 - 0.998 - - - - - - - microRNA 205
20. pdik1l ENSDARG00000056509 548 0.998 - 0.998 - - - - - - - PDLIM1 interacting kinase 1 like [Source:ZFIN;Acc:ZDB-GENE-051113-236]
21. hmp19 2554 0.998 - 0.998 - - - - - - - HMP19 protein
22. tma16 ENSDARG00000008068, ENSDARG00000115226 1169 0.998 - 0.998 - - - - - - - translation machinery associated 16 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-20]
23. aurka ENSDARG00000012485 3304 0.998 - 0.998 - - - - - - - aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
24. si:dkey-181m9.5 si:dkey-181m9.5 1079 0.998 - 0.998 - - - - - - -
25. tnfrsf9a ENSDARG00000060498, ENSDARG00000116466 679 0.998 - 0.998 - - - - - - - tumor necrosis factor receptor superfamily, member 9a [Source:ZFIN;Acc:ZDB-GENE-060421-8213]
26. IL17RD ENSDARG00000098359 2309 0.998 - 0.998 - - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
27. B3GNT2 B3GNT2 348 0.998 - 0.998 - - - - - - -
28. PRR5L PRR5L 408 0.998 - 0.998 - - - - - - -
29. hoxc1a ENSDARG00000070337 1460 0.998 - 0.998 - - - - - - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
30. txndc12 ENSDARG00000038980 795 0.998 - 0.998 - - - - - - - thioredoxin domain containing 12 (endoplasmic reticulum) [Source:ZFIN;Acc:ZDB-GENE-050522-497]
31. oraov1 497 0.998 - 0.998 - - - - - - - oral cancer overexpressed 1
32. elnb ENSDARG00000069017 744 0.998 - 0.998 - - - - - - - elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2]
33. pus10 ENSDARG00000079973 637 0.998 - 0.998 - - - - - - - pseudouridylate synthase 10 [Source:ZFIN;Acc:ZDB-GENE-080204-5]
34. BAX BAX 1673 0.997 - 0.997 - - - - - - -
35. E2F2 E2F2 871 0.997 - 0.997 - - - - - - -
36. ptprmb ptprmb 1516 0.997 - 0.997 - - - - - - -
37. nxf1 ENSDARG00000055076 3251 0.997 - 0.997 - - - - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
38. map2 ENSDARG00000055052 6062 0.997 - 0.997 - - - - - - - microtubule-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-041010-118]
39. tsc2 ENSDARG00000103125 1403 0.997 - 0.997 - - - - - - - TSC complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2702]
40. wnt5b ENSDARG00000102464 1662 0.997 - 0.997 - - - - - - - wingless-type MMTV integration site family, member 5b [Source:ZFIN;Acc:ZDB-GENE-980526-87]
41. DENND4B ENSDARG00000102914 1001 0.997 - 0.997 - - - - - - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
42. GRAMD1C ENSDARG00000076238 795 0.997 - 0.997 - - - - - - - GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
43. cyt1 ENSDARG00000092947 1717 0.997 - 0.997 - - - - - - - type I cytokeratin, enveloping layer [Source:ZFIN;Acc:ZDB-GENE-991008-6]
44. samhd1 ENSDARG00000071288 1279 0.997 - 0.997 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
45. noc4l ENSDARG00000045565 1337 0.997 - 0.997 - - - - - - - nucleolar complex associated 4 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-98]
46. mllt4 mllt4 2939 0.997 - 0.997 - - - - - - -
47. rnaseh2a ENSDARG00000018891 1979 0.997 - 0.997 - - - - - - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
48. twf2a ENSDARG00000094792 687 0.997 - 0.997 - - - - - - - twinfilin actin-binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7638]
49. lztfl1 ENSDARG00000105010 1697 0.997 - 0.997 - - - - - - - leucine zipper transcription factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-945]
50. lsmd1 lsmd1 2227 0.996 - 0.996 - - - - - - -
51. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 0.996 - 0.996 - - - - - - - ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
52. tusc2b ENSDARG00000025340 2391 0.996 - 0.996 - - - - - - - tumor suppressor 2, mitochondrial calcium regulator b [Source:ZFIN;Acc:ZDB-GENE-040718-99]
53. hmcn1 ENSDARG00000016936 1706 0.996 - 0.996 - - - - - - - hemicentin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-322]
54. ccnl1a ENSDARG00000055124, ENSDARG00000116311 2174 0.996 - 0.996 - - - - - - - cyclin L1a [Source:ZFIN;Acc:ZDB-GENE-050419-206]
55. mob3a ENSDARG00000019113 2551 0.996 - 0.996 - - - - - - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
56. cnppd1 ENSDARG00000027078 3778 0.996 - 0.996 - - - - - - - cyclin Pas1/PHO80 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6808]
57. cdh5 ENSDARG00000075549 2288 0.996 - 0.996 - - - - - - - cadherin 5 [Source:ZFIN;Acc:ZDB-GENE-040816-1]
58. dpy30 ENSDARG00000004427 7112 0.996 - 0.996 - - - - - - - dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
59. utp18 ENSDARG00000102618 1983 0.996 - 0.996 - - - - - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
60. mrps30 ENSDARG00000104111 2900 0.995 - 0.995 - - - - - - - mitochondrial ribosomal protein S30 [Source:ZFIN;Acc:ZDB-GENE-050809-4]
61. ppp1r12a ENSDARG00000010784 4333 0.995 - 0.995 - - - - - - - protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
62. mapkapk2a ENSDARG00000002552, ENSDARG00000116786 4233 0.995 - 0.995 - - - - - - - mitogen-activated protein kinase-activated protein kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5532]
63. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 0.995 - 0.995 - - - - - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
64. calm1a ENSDARG00000021811 4791 0.995 - 0.995 - - - - - - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
65. acsl1 acsl1 4216 0.994 - 0.994 - - - - - - -
66. nufip2 ENSDARG00000069066 3965 0.994 - 0.994 - - - - - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
67. CABZ01076275.1 ENSDARG00000100753 5137 0.994 - 0.994 - - - - - - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
68. msi2b ENSDARG00000032614 3095 0.994 - 0.994 - - - - - - - musashi RNA-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1268]
69. ENSDARG00000087348 ENSDARG00000087348 2870 0.994 - 0.994 - - - - - - -
70. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 0.994 - 0.994 - - - - - - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
71. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 0.993 - 0.993 - - - - - - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
72. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 0.992 - 0.992 - - - - - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
73. metap2b_1 ENSDARG00000102571 5507 0.991 - 0.991 - - - - - - - methionyl aminopeptidase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2172]
74. cox6a1 ENSDARG00000022438 18811 0.991 - 0.991 - - - - - - - cytochrome c oxidase subunit 6A1 [Source:ZFIN;Acc:ZDB-GENE-030131-7715]
75. myoz1b ENSDARG00000071445 13381 0.989 - 0.989 - - - - - - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
76. GCA GCA 5211 0.988 - 0.988 - - - - - - -
77. ppapdc3 ppapdc3 4924 0.987 - 0.987 - - - - - - -
78. zgc:63587 ENSDARG00000017140 8399 0.986 - 0.986 - - - - - - - zgc:63587 [Source:ZFIN;Acc:ZDB-GENE-040426-1175]
79. ndufb5 ENSDARG00000070824, ENSDARG00000116923 9287 0.985 - 0.985 - - - - - - - NADH:ubiquinone oxidoreductase subunit B5 [Source:ZFIN;Acc:ZDB-GENE-011010-1]
80. capzb ENSDARG00000100252 10444 0.985 - 0.985 - - - - - - - capping actin protein of muscle Z-line subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-7023]
81. matn4 ENSDARG00000015947 10967 0.985 - 0.985 - - - - - - - matrilin 4 [Source:ZFIN;Acc:ZDB-GENE-050208-64]
82. col4a5 ENSDARG00000052063 19251 0.985 - 0.985 - - - - - - - collagen, type IV, alpha 5 (Alport syndrome) [Source:ZFIN;Acc:ZDB-GENE-030131-2281]
83. perp ENSDARG00000063572 6423 0.985 - 0.985 - - - - - - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
84. TEAD3 TEAD3 8614 0.983 - 0.983 - - - - - - -
85. pvalb4 ENSDARG00000024433 35736 0.983 - 0.983 - - - - - - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
86. jun ENSDARG00000043531 3385 0.978 - 0.978 - - - - - - - Jun proto-oncogene, AP-1 transcription factor subunit [Source:ZFIN;Acc:ZDB-GENE-030131-7859]
87. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 0.977 - 0.977 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
88. phb ENSDARG00000057414 9551 0.974 - 0.974 - - - - - - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
89. slc7a3a ENSDARG00000020645 1458 0.973 - 0.973 - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 3a [Source:ZFIN;Acc:ZDB-GENE-041114-206]
90. INCENP 1189 0.971 - 0.971 - - - - - - - inner centromere protein
91. apmap ENSDARG00000017422 2692 0.971 - 0.971 - - - - - - - adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
92. pam ENSDARG00000100170 2442 0.971 - 0.971 - - - - - - - peptidylglycine alpha-amidating monooxygenase [Source:ZFIN;Acc:ZDB-GENE-090313-384]
93. stambpl1 ENSDARG00000003085 665 0.971 - 0.971 - - - - - - - STAM binding protein-like 1 [Source:ZFIN;Acc:ZDB-GENE-100215-4]
94. wasla ENSDARG00000014113, ENSDARG00000113629, ENSDARG00000115471 1529 0.971 - 0.971 - - - - - - - Wiskott-Aldrich syndrome-like a [Source:ZFIN;Acc:ZDB-GENE-070209-220]
95. mapre1b ENSDARG00000002659 9119 0.97 - 0.970 - - - - - - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
96. si:dkeyp-12a9.5 3058 0.968 - 0.968 - - - - - - - si:dkeyp-12a9.5
97. eif3g ENSDARG00000016889 10367 0.967 - 0.967 - - - - - - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
98. WIPF2 WIPF2 3171 0.966 - 0.966 - - - - - - -
99. zgc:158387 zgc:158387 9147 0.964 - 0.964 - - - - - - -
100. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 0.96 - 0.960 - - - - - - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]

There are 463 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA