Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for uhrf1

Gene Name Gene ID Reads Annotation
uhrf1 ENSDARG00000103409 3282 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]










Genes with expression patterns similar to uhrf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. uhrf1 ENSDARG00000103409 3282 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
2. snrnp70 ENSDARG00000077126 5921 3.381 - - - - - 0.753 0.977 0.827 0.824 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
3. fam60al 2846 3.155 0.703 - - 0.840 - 0.734 - 0.878 - family with sequence similarity 60, member A, like
4. ilf2 ENSDARG00000014591 14543 3.064 0.806 - - 0.726 - - - 0.786 0.746 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
5. lmnb2 ENSDARG00000101624 11304 3.063 - - - 0.795 - - 0.713 0.830 0.725 lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
6. sumo3a ENSDARG00000028119 13447 3.044 0.751 - - 0.713 - 0.788 - - 0.792 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
7. slc29a1a ENSDARG00000101289 2074 2.982 - - - - 0.706 0.717 - 0.775 0.784 solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
8. nup107 ENSDARG00000016010 1043 2.568 - - 0.886 0.706 - - 0.976 - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
9. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 2.54 - - 0.822 - - 0.734 0.984 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
10. prpf4bb ENSDARG00000040310 2260 2.484 - 0.866 - 0.788 - - - - 0.830 pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
11. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 2.48 - - - 0.785 - - 0.977 - 0.718 RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
12. mapta ENSDARG00000089314 2038 2.476 - - - - - 0.794 0.971 0.711 - microtubule-associated protein tau a [Source:ZFIN;Acc:ZDB-GENE-081027-1]
13. rerea ENSDARG00000077353 4162 2.444 - - 0.900 - - 0.719 - - 0.825 arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
14. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.422 0.786 - - - - - - 0.837 0.799 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
15. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 2.418 - - 0.753 0.715 - - 0.950 - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
16. cdkn2aipnl ENSDARG00000053395 5107 2.417 0.720 - - 0.739 - - 0.958 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
17. zswim5 ENSDARG00000055900 4243 2.41 - - - - - 0.823 - 0.864 0.723 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
18. TNRC6B ENSDARG00000074161 2464 2.404 - - 0.859 - - 0.788 - - 0.757 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
19. fscn1a ENSDARG00000059680 3999 2.399 - 0.813 - - - 0.732 - - 0.854 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
20. slbp ENSDARG00000100558 3405 2.389 - - - 0.740 - - - 0.847 0.802 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
21. tcea1 ENSDARG00000003531 2912 2.379 - - - 0.782 - 0.748 - 0.849 - transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]
22. zeb1b ENSDARG00000013207, ENSDARG00000113922 2571 2.345 0.735 - 0.853 - - 0.757 - - - zinc finger E-box binding homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010621-1]
23. cd99l2 ENSDARG00000056722 5036 2.327 0.751 - - - - 0.763 - - 0.813 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
24. whsc1l1 8544 2.324 0.794 - - - - - - 0.803 0.727 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
25. CASK CASK 1750 2.312 - - 0.839 - - 0.717 - - 0.756
26. wu:fc51f04 wu:fc51f04 7074 2.311 - - - 0.752 - - 0.843 - 0.716
27. apex1 ENSDARG00000045843 6345 2.297 0.734 - - 0.742 - - - 0.821 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
28. tuba8l3 ENSDARG00000070155 7525 2.294 0.766 - - - - 0.709 0.819 - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
29. trrap ENSDARG00000100623 3429 2.291 - - 0.759 0.716 - - - 0.816 - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
30. cspg5a ENSDARG00000069981 1699 2.286 0.718 - - - - - - 0.775 0.793 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
31. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.278 - - 0.809 - 0.706 - - - 0.763 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
32. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.273 0.732 - - - - 0.762 - - 0.779 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
33. khsrp ENSDARG00000026489 15738 2.269 0.781 - - - - 0.733 - - 0.755 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
34. msl2a ENSDARG00000038909 1357 2.255 - - - 0.734 0.746 0.775 - - - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
35. notch1b ENSDARG00000052094 7874 2.207 0.740 - - - - 0.728 - 0.739 - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
36. ssbp3b ENSDARG00000030155 7163 2.162 0.720 - - - - 0.713 - - 0.729 single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
37. prkaa1 ENSDARG00000060596 1448 1.841 - - 0.855 - - - 0.986 - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030325-1]
38. CABZ01068263.1 CABZ01068263.1 712 1.82 - - 0.830 - - - 0.990 - -
39. VPS37B_1 VPS37B_1 1816 1.817 - - 0.844 - - - 0.973 - -
40. cpsf1 ENSDARG00000034178 2036 1.812 - - - - - - 0.988 - 0.824 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
41. abl1 ENSDARG00000035187 3553 1.8 - - - - - - 0.976 - 0.824 c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
42. fbxo30a ENSDARG00000058561 867 1.791 - - 0.816 - - - 0.975 - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
43. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.787 - 0.817 - - - - 0.970 - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
44. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.785 0.912 - - - - - 0.873 - - zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
45. socs5a ENSDARG00000100717 6927 1.783 - - 0.805 - - - 0.978 - - suppressor of cytokine signaling 5a [Source:ZFIN;Acc:ZDB-GENE-061013-408]
46. ap1s1 ENSDARG00000056803 3854 1.762 - - 0.794 - - - 0.968 - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
47. wdr82 ENSDARG00000014083 3159 1.758 - - - - - 0.779 0.979 - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
48. supt6h ENSDARG00000006524 3221 1.756 - - 0.896 - - - - - 0.860 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
49. PVRL4 1691 1.754 - - 0.798 - - - 0.956 - - poliovirus receptor-related 4
50. clptm1l ENSDARG00000021048 1234 1.75 - - 0.787 - - - 0.963 - - CLPTM1-like [Source:ZFIN;Acc:ZDB-GENE-040718-75]
51. actr10 ENSDARG00000038432 1598 1.745 - - - - - 0.766 0.979 - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
52. DUSP23_1 DUSP23_1 1085 1.737 - 0.756 - - - - 0.981 - -
53. ankrd13c ENSDARG00000103831 3593 1.735 - - 0.826 - - - 0.909 - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
54. basp1 ENSDARG00000053358, ENSDARG00000110677 2590 1.735 0.749 - - - - - 0.986 - - brain abundant, membrane attached signal protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-158]
55. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 1.73 - - - - - 0.744 0.986 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
56. plcg1 ENSDARG00000038442 5324 1.729 - - 0.877 - - - - - 0.852 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
57. ik ENSDARG00000004161 3132 1.727 - - - - - - 0.979 - 0.748 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
58. TMEM184B TMEM184B 1280 1.724 - 0.737 - - - - 0.987 - -
59. klc2 3058 1.723 0.737 - - - - - 0.986 - - kinesin light chain 2
60. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.722 - - - - 0.742 - 0.980 - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
61. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.721 - - 0.737 - - - 0.984 - -
62. tmed4 ENSDARG00000024954 3476 1.719 - - - - - - 0.973 0.746 - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
63. rybpb ENSDARG00000053459 1464 1.718 - - - - - 0.741 0.977 - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
64. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.718 - - - - - - 0.990 0.728 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
65. syncripl ENSDARG00000026723 3889 1.718 - 0.873 - - - - - - 0.845 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
66. gli1 ENSDARG00000101244 534 1.716 - - - - - 0.733 0.983 - - GLI family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-030321-1]
67. kmt2a ENSDARG00000004537 2169 1.715 0.737 - - - - - 0.978 - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
68. srsf2a ENSDARG00000057484 25721 1.714 - - - 0.783 - - 0.931 - - serine/arginine-rich splicing factor 2a [Source:ZFIN;Acc:ZDB-GENE-040426-2706]
69. srrm2 ENSDARG00000037965 1967 1.713 - - - - - 0.729 0.984 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
70. prpf39 ENSDARG00000100209 3721 1.707 - - - 0.734 - - 0.973 - - PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
71. rac3b ENSDARG00000020795 1523 1.7 - - - - - 0.715 0.985 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
72. dpm3 ENSDARG00000058650 4386 1.699 - - - - - 0.775 0.924 - - dolichyl-phosphate mannosyltransferase polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1782]
73. sgcg_1 ENSDARG00000038107 1998 1.694 - 0.741 - - - - 0.953 - - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
74. krcp ENSDARG00000040224 5961 1.693 - - - 0.777 - - 0.916 - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
75. tyms ENSDARG00000042894 3068 1.692 - - - 0.736 - - 0.956 - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
76. ppm1g ENSDARG00000075559 6516 1.688 - - - 0.760 - - 0.928 - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
77. etnk1 ENSDARG00000019420 2166 1.686 - - 0.731 - - - 0.955 - - ethanolamine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-21]
78. ifrd1 ENSDARG00000068708 2858 1.684 - - - - - - 0.951 - 0.733 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
79. phf21ab ENSDARG00000021378 1706 1.681 - - - 0.704 - - 0.977 - - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
80. cwc25 ENSDARG00000003382 2134 1.68 - - - - - 0.891 - - 0.789 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
81. ube2e1 ENSDARG00000116649 10656 1.68 - - - 0.740 - - 0.940 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
82. atf6 ENSDARG00000012656 3873 1.679 - - - - - 0.729 0.950 - - activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
83. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.676 - - 0.893 - - - - - 0.783 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
84. col14a1a ENSDARG00000005762 4778 1.667 - - 0.706 - - - 0.961 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
85. si:ch211-22i13.2 ENSDARG00000043485 4719 1.661 - - - - - - 0.916 0.745 - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
86. mrpl32 ENSDARG00000060489 2728 1.66 - 0.711 - - - - 0.949 - - mitochondrial ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060825-188]
87. bzw1a ENSDARG00000010481 28451 1.655 0.808 - - - - - - - 0.847 basic leucine zipper and W2 domains 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3951]
88. acbd3 ENSDARG00000042623 2643 1.652 - 0.738 - - - - 0.914 - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
89. ckap5 ENSDARG00000102674 5068 1.649 - 0.705 - - - - 0.944 - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
90. sox2 ENSDARG00000070913 2763 1.646 0.779 - - 0.867 - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
91. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 1.646 - - 0.895 - 0.751 - - - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
92. psma3 ENSDARG00000086618 6200 1.642 - - - - - - 0.917 - 0.725 proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
93. vps72 1164 1.642 - - 0.865 - - 0.777 - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
94. khdrbs1a ENSDARG00000052856 53666 1.639 0.824 - - - - - - 0.815 - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
95. vdac1 ENSDARG00000045132 8051 1.635 0.829 - - - - - - - 0.806 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
96. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.634 - - - - - 0.830 - 0.804 - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
97. mxd3 ENSDARG00000098350 3040 1.633 - - 0.808 - - - - 0.825 - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
98. dek ENSDARG00000070108 2262 1.632 - - - 0.824 - 0.808 - - - DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
99. llgl1 ENSDARG00000009693 4205 1.631 - 0.807 - - - - - - 0.824 lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
100. AGO1 ENSDARG00000092644 4521 1.63 0.780 - - - - - - 0.850 - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]

There are 1914 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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