Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ufm1

Gene Name Gene ID Reads Annotation
ufm1 ENSDARG00000043857 4152 ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]










Genes with expression patterns similar to ufm1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ufm1 ENSDARG00000043857 4152 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin-fold modifier 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2930]
2. ssr2 ENSDARG00000005230 31940 3.055 - - - - 0.775 0.716 0.704 - 0.860 signal sequence receptor, beta [Source:ZFIN;Acc:ZDB-GENE-010413-1]
3. agpat4 ENSDARG00000069044 4487 2.642 - - - - 0.815 0.972 - 0.855 - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
4. ehd3 ENSDARG00000007869 3238 2.64 - - - - 0.902 - - 0.846 0.892 EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
5. capn2a ENSDARG00000091699 5924 2.43 - - - - - 0.954 0.750 - 0.726 calpain 2, (m/II) large subunit a [Source:ZFIN;Acc:ZDB-GENE-050320-69]
6. zfand5b ENSDARG00000002271 4145 2.385 - 0.853 - - 0.810 - 0.722 - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
7. bcl2l1 ENSDARG00000008434 1956 2.383 0.711 - - - - - 0.786 - 0.886 bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
8. sec62 ENSDARG00000019951 3724 2.363 - - - - - - 0.720 0.775 0.868 SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
9. si:ch211-161h7.4 ENSDARG00000087238 4399 2.345 - 0.758 - - 0.830 - - 0.757 - si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
10. pank1b ENSDARG00000010098 3202 1.909 - - - - - 0.990 - - 0.919 pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
11. chst11 ENSDARG00000034375 2701 1.885 - - - - 0.888 0.997 - - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
12. atf4b2 atf4b2 4734 1.842 - - - - - 0.989 - 0.853 -
13. ebf3 ebf3 4238 1.83 - - - - - 0.990 - 0.840 -
14. dusp11 ENSDARG00000038156 2490 1.825 - - - - 0.920 - - - 0.905 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
15. cnpy1 ENSDARG00000003757 1132 1.819 - - - - 0.920 - - - 0.899 canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
16. gnao1a ENSDARG00000016676 8184 1.809 - - - - 0.926 0.883 - - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
17. alg5 ENSDARG00000021938, ENSDARG00000061235 2279 1.802 - - - - 0.905 - - - 0.897 asparagine-linked glycosylation 5 (dolichyl-phosphate beta-glucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-6586]
18. mfap2 ENSDARG00000059367 3774 1.801 - - - - 0.915 - - - 0.886 microfibril associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6710]
19. slc3a2a ENSDARG00000036427, ENSDARG00000112231 2967 1.785 - - - - - 0.996 0.789 - - solute carrier family 3 (amino acid transporter heavy chain), member 2a [Source:ZFIN;Acc:ZDB-GENE-000831-3]
20. arrb2b ENSDARG00000011545 3126 1.77 - - - - 0.929 - - 0.841 - arrestin, beta 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1332]
21. fam3c ENSDARG00000056152 3833 1.76 - - - - - 0.997 - 0.763 - family with sequence similarity 3, member C [Source:ZFIN;Acc:ZDB-GENE-030131-6137]
22. edem1 ENSDARG00000025094 1343 1.749 - 0.864 - - - - - - 0.885 ER degradation enhancer, mannosidase alpha-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-808]
23. CPEB4 CPEB4 3249 1.743 - - - - 0.923 - - 0.820 -
24. fbxl5 ENSDARG00000043046 1403 1.737 - - - - 0.887 - - 0.850 - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
25. slc7a8a ENSDARG00000075831 2987 1.735 - - - - - 0.945 0.790 - - solute carrier family 7 (amino acid transporter light chain, L system), member 8a [Source:ZFIN;Acc:ZDB-GENE-121120-2]
26. dla ENSDARG00000010791 9281 1.734 - - - - 0.853 0.881 - - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
27. nucks1b ENSDARG00000012777 4468 1.732 - - - - - - - 0.818 0.914 nuclear casein kinase and cyclin-dependent kinase substrate 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4544]
28. copa ENSDARG00000004173 3977 1.731 - 0.812 - - - - - - 0.919 coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
29. znf362 znf362 869 1.728 - - - - 0.940 - 0.788 - -
30. SLC13A4 ENSDARG00000059053 2114 1.726 - - - - - 0.974 0.752 - - solute carrier family 13 (sodium/sulfate symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-71]
31. ucp2 ENSDARG00000043154 2921 1.722 - 0.742 - - - 0.980 - - - uncoupling protein 2 [Source:ZFIN;Acc:ZDB-GENE-990708-8]
32. bcap31 ENSDARG00000044972 8708 1.721 - - - - - 0.935 0.786 - - B cell receptor associated protein 31 [Source:ZFIN;Acc:ZDB-GENE-030616-63]
33. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 1.721 - 0.748 - - - 0.973 - - - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
34. tufm ENSDARG00000104173 9292 1.718 - - - - - 0.979 - - 0.739 Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
35. abca3b ENSDARG00000100524 2416 1.717 - 0.843 - - - - - - 0.874 ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
36. gipc1 ENSDARG00000104483 2913 1.716 - - - - - - - 0.868 0.848 GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
37. esyt2a ENSDARG00000030824 1907 1.712 - 0.719 - - - 0.993 - - - extended synaptotagmin-like protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-588]
38. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.711 - - - - - - 0.845 - 0.866 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
39. fzd1 ENSDARG00000106062 1581 1.708 - - - - 0.914 - 0.794 - - frizzled class receptor 1 [Source:ZFIN;Acc:ZDB-GENE-990415-219]
40. lima1 lima1 4760 1.708 - - - - - 0.989 0.719 - -
41. dap ENSDARG00000000069, ENSDARG00000114419 13155 1.708 - - - - - 0.892 - - 0.816 death-associated protein [Source:ZFIN;Acc:ZDB-GENE-000511-3]
42. mgea5 6076 1.706 - - - - - 0.990 0.716 - - meningioma expressed antigen 5 (hyaluronidase), transcript variant X2
43. lin7c ENSDARG00000027322 3083 1.706 - 0.801 - - - - - - 0.905 lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
44. arfrp1 ENSDARG00000057857 2840 1.701 - - - - 0.899 - - 0.802 - ADP-ribosylation factor related protein 1 [Source:ZFIN;Acc:ZDB-GENE-050227-14]
45. s100v2 ENSDARG00000070702 8645 1.7 - 0.759 - - - 0.941 - - - S100 calcium binding protein V2 [Source:ZFIN;Acc:ZDB-GENE-030131-8909]
46. nccrp1 ENSDARG00000035326, ENSDARG00000113175 11385 1.699 - - - - - 0.922 0.777 - - non-specific cytotoxic cell receptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-000210-13]
47. waslb ENSDARG00000006283 2160 1.698 - - - - - - 0.795 - 0.903 Wiskott-Aldrich syndrome-like b [Source:ZFIN;Acc:ZDB-GENE-040426-718]
48. zfand5a ENSDARG00000018898 3308 1.678 - - - - - - 0.775 - 0.903 zinc finger, AN1-type domain 5a [Source:ZFIN;Acc:ZDB-GENE-040426-1979]
49. taf11 ENSDARG00000037855 2624 1.672 - - - - 0.909 - - 0.763 - TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040718-283]
50. furina ENSDARG00000062909, ENSDARG00000117158 6313 1.665 - - - - - - 0.805 - 0.860 furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
51. rpa2 ENSDARG00000037188 4284 1.664 - - - - 0.814 - - - 0.850 replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
52. crb2a ENSDARG00000060106 1307 1.663 - - - - - - 0.804 0.859 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
53. nup98 ENSDARG00000074955 3998 1.66 - 0.748 - - 0.912 - - - - nucleoporin 98 [Source:ZFIN;Acc:ZDB-GENE-040426-1180]
54. slc1a2b ENSDARG00000102453 3136 1.66 - - - - 0.802 - - 0.858 - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
55. fahd2a ENSDARG00000103759 9581 1.657 - - - - - 0.900 0.757 - - fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
56. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.655 - - - - - - - 0.796 0.859 translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
57. hgs ENSDARG00000020960 3574 1.654 - - - - 0.926 - 0.728 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
58. C7H20orf27 C7H20orf27 1864 1.654 - - - - - - 0.759 - 0.895
59. snrpb ENSDARG00000011125 11729 1.652 - - - - 0.796 - - 0.856 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
60. aqp3a ENSDARG00000003808 9044 1.648 - - - - - 0.856 0.792 - - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
61. eif2d ENSDARG00000012929 2624 1.645 - - - - 0.911 - - - 0.734 eukaryotic translation initiation factor 2D [Source:ZFIN;Acc:ZDB-GENE-040426-1226]
62. serpinf2b ENSDARG00000061383 3859 1.645 - - - - - 0.933 0.712 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2b [Source:ZFIN;Acc:ZDB-GENE-061215-114]
63. BX682552.2 BX682552.2 1427 1.632 - - - - - - - 0.755 0.877
64. maf1 ENSDARG00000013122 3365 1.631 - 0.736 - - - - - 0.895 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
65. acacb ENSDARG00000061994 1886 1.629 - - - - 0.928 - 0.701 - - acetyl-CoA carboxylase beta [Source:ZFIN;Acc:ZDB-GENE-060526-132]
66. rfx2 ENSDARG00000013575 1275 1.628 - 0.728 - - - - - - 0.900 regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
67. FBLIM1 ENSDARG00000071558 1793 1.625 - 0.732 - - 0.893 - - - - filamin binding LIM protein 1 [Source:ZFIN;Acc:ZDB-GENE-061013-662]
68. ist1 ENSDARG00000051888 4536 1.625 - 0.755 - - - - - - 0.870 increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
69. kmt2bb ENSDARG00000060697 5230 1.624 - - - - 0.857 - - - 0.767 lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
70. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.623 - 0.771 - - - - - - 0.852 glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
71. tfap2a ENSDARG00000059279 3741 1.621 - - - - - - 0.782 - 0.839 transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
72. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 1.619 - 0.816 - - - - 0.803 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
73. gnmt ENSDARG00000006840 2422 1.617 - - - - - - 0.797 - 0.820 glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
74. sdc4 ENSDARG00000059906 10105 1.614 - 0.733 - - 0.881 - - - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
75. si:dkey-13i19.8 ENSDARG00000093058 4617 1.609 - 0.776 - - - - - - 0.833 si:dkey-13i19.8 [Source:ZFIN;Acc:ZDB-GENE-041210-156]
76. ide ENSDARG00000075570 4331 1.605 - - - - 0.868 - 0.737 - - insulin-degrading enzyme [Source:ZFIN;Acc:ZDB-GENE-070410-85]
77. alg2 ENSDARG00000070399 772 1.6 - 0.720 - - - - - - 0.880 asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
78. zgc:162356 zgc:162356 5115 1.6 - - - - 0.764 - - - 0.836
79. CR354611.2 CR354611.2 2040 1.597 - - - - - - - 0.864 0.733
80. trim33 ENSDARG00000016181 1718 1.595 - 0.708 - - - - - - 0.887 tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
81. g6pca.2 ENSDARG00000013721 2034 1.595 0.713 - - - 0.882 - - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
82. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.591 - - - - 0.836 - - - 0.755 thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
83. mgst1 mgst1 2820 1.582 - 0.851 - - - - 0.731 - -
84. inpp5b ENSDARG00000103683 2792 1.578 - 0.732 - - - - 0.846 - - inositol polyphosphate-5-phosphatase B [Source:ZFIN;Acc:ZDB-GENE-110411-228]
85. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.577 - 0.732 - - - - - 0.845 - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
86. si:ch211-209n20.57 si:ch211-209n20.57 1188 1.575 - 0.717 - - - - - 0.858 -
87. creb3l3l ENSDARG00000020926, ENSDARG00000116217 1458 1.571 - 0.764 - - - - - 0.807 - cAMP responsive element binding protein 3-like 3 like [Source:ZFIN;Acc:ZDB-GENE-040426-2942]
88. ssr4 ENSDARG00000019444 20207 1.568 - - - - - - 0.723 - 0.845 signal sequence receptor, delta [Source:ZFIN;Acc:ZDB-GENE-030131-4900]
89. limk2 ENSDARG00000005104 2598 1.566 - 0.740 - - - - - - 0.826 LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
90. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 1.566 - 0.854 - - 0.712 - - - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
91. GABARAP GABARAP 8341 1.566 - - - - 0.848 - - - 0.718
92. atp5mf ENSDARG00000037867 11052 1.565 - - - - - 0.844 - 0.721 - ATP synthase membrane subunit f [Source:ZFIN;Acc:ZDB-GENE-050309-87]
93. pls3 ENSDARG00000037655 5175 1.563 - 0.790 - - - - 0.773 - - plastin 3 (T isoform) [Source:ZFIN;Acc:ZDB-GENE-040718-10]
94. GOLPH3 ENSDARG00000052851, ENSDARG00000109334 3117 1.563 - 0.710 - - - 0.853 - - - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
95. mthfd2_1 ENSDARG00000098646, ENSDARG00000112356, ENSDARG00000117060 2390 1.562 - - - - - - 0.734 0.828 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase [Source:ZFIN;Acc:ZDB-GENE-040704-20]
96. pgrmc1 ENSDARG00000054172 5423 1.562 - 0.741 - - - - 0.821 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
97. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.56 - 0.783 - - - - - - 0.777 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
98. ep300b ENSDARG00000061108 5173 1.557 - 0.730 - - 0.827 - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
99. slc35f6 ENSDARG00000016745, ENSDARG00000114790 3823 1.554 - - - - - - 0.701 - 0.853 solute carrier family 35, member F6 [Source:ZFIN;Acc:ZDB-GENE-040718-297]
100. emilin1b ENSDARG00000026166 1530 1.549 - - - - - - 0.832 - 0.717 elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]

There are 1512 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA