Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for uchl3

Gene Name Gene ID Reads Annotation
uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]










Genes with expression patterns similar to uchl3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. uchl3 ENSDARG00000030177, ENSDARG00000109434 2843 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-050522-158]
2. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 2.736 - 0.979 - - - 0.821 - - 0.936 mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
3. hspa4a ENSDARG00000004754 3439 2.632 - 0.917 - - - - 0.776 - 0.939 heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
4. bcl2l1 ENSDARG00000008434 1956 2.549 - 0.897 - - - 0.706 - - 0.946 bcl2-like 1 [Source:ZFIN;Acc:ZDB-GENE-010730-1]
5. psma4 ENSDARG00000045928 5112 2.497 - 0.936 - - - 0.791 0.770 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
6. eif4g2a ENSDARG00000020377, ENSDARG00000112658 6895 2.456 - - 0.786 - - 0.799 - - 0.871 eukaryotic translation initiation factor 4, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-2173]
7. pdhb ENSDARG00000021346 9088 2.437 - 0.780 0.915 0.742 - - - - - pyruvate dehydrogenase E1 beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2173]
8. htatsf1 ENSDARG00000056649 2018 2.392 - - - - - 0.786 0.710 - 0.896 HIV-1 Tat specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1578]
9. lrpprc ENSDARG00000043970 3847 2.388 - - - - - 0.713 0.728 - 0.947 leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
10. sqstm1 ENSDARG00000075014 2392 2.304 - 0.780 - 0.735 - - - - 0.789 sequestosome 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2204]
11. ctbp2 ctbp2 3255 2.304 - - - - - 0.726 0.735 - 0.843
12. pogza ENSDARG00000054778 1495 1.967 - 0.986 0.981 - - - - - - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
13. schip1 ENSDARG00000035175 3838 1.959 - 0.971 0.988 - - - - - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
14. plekhh1 ENSDARG00000053835 2123 1.953 - - 0.990 - - - - - 0.963 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
15. si:ch73-7i4.1 ENSDARG00000094554 771 1.944 - - 0.992 - - - - - 0.952 si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
16. hcls1 ENSDARG00000012729 1547 1.913 - 0.990 - - - - - - 0.923 hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
17. si:dkey-147f3.4_1 ENSDARG00000071029, ENSDARG00000092077 2259 1.905 - 0.975 - - - - - - 0.930 si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
18. sel1l ENSDARG00000004581 2246 1.903 - 0.947 - - - - - - 0.956 SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
19. MON2 ENSDARG00000099798 2359 1.899 - - 0.985 - - 0.914 - - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
20. derl1 ENSDARG00000021905 4698 1.879 - 0.956 0.923 - - - - - - derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
21. bcar1 ENSDARG00000056525 6563 1.879 - 0.965 0.914 - - - - - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
22. psmd12 ENSDARG00000052377 7763 1.867 - - 0.890 - - - - - 0.977 proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
23. CABZ01049057.1 CABZ01049057.1 479 1.863 - 0.990 - - - 0.873 - - -
24. PHTF2 ENSDARG00000102123, ENSDARG00000114503 898 1.86 - - - - - 0.882 - - 0.978 putative homeodomain transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-040711-4]
25. znf592 ENSDARG00000060885 776 1.839 - - - - - 0.887 - - 0.952 zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
26. emilin3a ENSDARG00000078052 1652 1.833 - - 0.930 - - - - - 0.903 elastin microfibril interfacer 3a [Source:ZFIN;Acc:ZDB-GENE-080612-2]
27. srp68 ENSDARG00000020820 1719 1.823 - 0.962 - - - 0.861 - - - signal recognition particle 68 [Source:ZFIN;Acc:ZDB-GENE-040831-3]
28. DALRD3 ENSDARG00000068602 3062 1.822 - 0.906 - - - - - - 0.916 DALR anticodon binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061103-415]
29. fscn1a ENSDARG00000059680 3999 1.817 - - 0.984 - - 0.833 - - - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
30. ndufv2 ENSDARG00000013044 3758 1.794 - 0.954 - - - - - - 0.840 NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
31. thoc2 ENSDARG00000037503 8711 1.793 - - 0.969 - - - 0.824 - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
32. BTBD2 BTBD2 610 1.791 - 0.986 - - - 0.805 - - -
33. nf2b ENSDARG00000025567 1441 1.791 - 0.996 - - - 0.795 - - - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
34. sas sas 1783 1.789 - - - - - 0.812 - - 0.977
35. kansl3 ENSDARG00000029556 2487 1.777 - 0.982 - - - 0.795 - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
36. scoca ENSDARG00000087333 1739 1.775 - - - - - - 0.825 - 0.950 short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
37. AIFM2 ENSDARG00000077549 1419 1.77 - - - - - 0.799 - - 0.971 apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
38. CDCA4 ENSDARG00000042319 7918 1.77 - 0.928 - - - 0.842 - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
39. rnf7 ENSDARG00000055524 3390 1.767 - - - - - - 0.855 - 0.912 ring finger protein 7 [Source:ZFIN;Acc:ZDB-GENE-050220-12]
40. ptgs2a ENSDARG00000004539 1207 1.761 - - - - - 0.831 - - 0.930 prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
41. FAM126B 588 1.76 - - - - - 0.786 - - 0.974 family with sequence similarity 126 member B
42. MRPS12_1 MRPS12_1 2714 1.758 - - - - - - 0.774 - 0.984
43. taf10 ENSDARG00000068641 3333 1.753 - - - - - - 0.877 - 0.876 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
44. NDNF ENSDARG00000062936 7287 1.75 - 0.857 0.893 - - - - - - neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
45. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.748 - - - - - 0.841 - - 0.907 DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
46. atp5ia 4773 1.744 - 0.934 - - - - - - 0.810 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
47. hars2 hars2 1104 1.739 - 0.931 - - - - 0.808 - -
48. si:dkey-51e6.1 ENSDARG00000042133 564 1.739 - 0.992 - - - - 0.747 - - si:dkey-51e6.1 [Source:ZFIN;Acc:ZDB-GENE-041014-198]
49. bcr ENSDARG00000079286 578 1.733 - 0.994 - - - 0.739 - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
50. tmem201 ENSDARG00000077307 453 1.732 - 0.995 - - - 0.737 - - - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
51. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 1.725 - 0.969 - 0.756 - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
52. C19H1orf85 C19H1orf85 1587 1.724 - - 0.990 0.734 - - - - -
53. crls1 ENSDARG00000038000 1088 1.717 - 0.985 - - - - 0.732 - - cardiolipin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2519]
54. hoxc8a ENSDARG00000070346 4252 1.713 - 0.931 - - - - 0.782 - - homeobox C8a [Source:ZFIN;Acc:ZDB-GENE-990415-114]
55. si:dkey-256i11.1 si:dkey-256i11.1 3373 1.706 - 0.938 - - - 0.768 - - -
56. vwa8 ENSDARG00000078593, ENSDARG00000112243, ENSDARG00000114725 533 1.703 - 0.993 - - - 0.710 - - - von Willebrand factor A domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-070912-407]
57. xpo7 ENSDARG00000005540, ENSDARG00000110221 4566 1.702 - - 0.983 - - 0.719 - - - exportin 7 [Source:ZFIN;Acc:ZDB-GENE-060628-2]
58. ap2b1 ENSDARG00000035152 2912 1.698 - - - - - 0.805 - - 0.893 adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
59. CT583658.1 CT583658.1 561 1.698 - 0.991 - - - 0.707 - - -
60. vps45 ENSDARG00000061180 791 1.697 - - - - - 0.726 - - 0.971 vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
61. SYS1 ENSDARG00000017606 1369 1.689 - 0.981 - - - 0.708 - - - Sys1 golgi trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-8283]
62. uqcc uqcc 4742 1.683 - 0.982 - - - - - - 0.701
63. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.682 0.738 0.944 - - - - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
64. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.681 - - - - - 0.701 - - 0.980 vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
65. hint1 ENSDARG00000103824, ENSDARG00000110789 8302 1.673 - - 0.911 - - - - - 0.762 histidine triad nucleotide binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040927-8]
66. C22H19orf70 C22H19orf70 4393 1.67 - 0.946 - - - - 0.724 - -
67. stat5.2 stat5.2 1187 1.67 - 0.964 - - - 0.706 - - -
68. bsdc1 ENSDARG00000052623, ENSDARG00000116408 1987 1.668 - 0.958 - - - 0.710 - - - BSD domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040905-1]
69. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.663 - - 0.916 - - - 0.747 - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
70. naa15a ENSDARG00000003213 5889 1.653 - 0.864 - - - - 0.789 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
71. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.643 - 0.880 - - - - 0.763 - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
72. pmepa1 ENSDARG00000039325 652 1.642 - - - - - 0.722 - - 0.920 prostate transmembrane protein, androgen induced 1 [Source:ZFIN;Acc:ZDB-GENE-040718-320]
73. tcta ENSDARG00000044194 1183 1.639 - - - - - 0.839 0.800 - - T cell leukemia translocation altered [Source:ZFIN;Acc:ZDB-GENE-040718-325]
74. ssr4 ENSDARG00000019444 20207 1.632 - - 0.800 - - - - - 0.832 signal sequence receptor, delta [Source:ZFIN;Acc:ZDB-GENE-030131-4900]
75. farsb ENSDARG00000016864 6776 1.631 - 0.812 - - - - 0.819 - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
76. ndufv1 ENSDARG00000036438 8437 1.628 - 0.771 - - - - - - 0.857 NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
77. drg1 ENSDARG00000039345 7545 1.628 - - - - - 0.841 0.787 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
78. pcbp2 ENSDARG00000099039 4248 1.626 - - - - - 0.816 - - 0.810 poly(rC) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-563]
79. cdv3 ENSDARG00000023028 12380 1.625 - - 0.915 - - - 0.710 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
80. snoU83B snoU83B 4666 1.624 - - - - - - 0.752 - 0.872
81. ktn1 ENSDARG00000032802 6251 1.606 - 0.904 - - - - 0.702 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
82. sumo3a ENSDARG00000028119 13447 1.6 - - 0.851 - - 0.749 - - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
83. lpgat1 ENSDARG00000013542 762 1.599 - - - - - 0.835 0.764 - - lysophosphatidylglycerol acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2906]
84. hoxb7a ENSDARG00000056030 1212 1.594 - - - - - 0.860 0.734 - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
85. gpsm1b ENSDARG00000054874 1308 1.592 - - - - - 0.834 0.758 - - G protein signaling modulator 1b [Source:ZFIN;Acc:ZDB-GENE-110203-5]
86. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.591 - 0.796 - - - 0.795 - - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
87. ube2a ENSDARG00000098466 12765 1.584 - 0.773 - - - - 0.811 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
88. asphd2 ENSDARG00000059629 1005 1.582 - - - - - 0.814 0.768 - - aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
89. mt-nd4l ENSDARG00000063916 2229 1.573 0.730 - - - - - 0.843 - - NADH dehydrogenase 4L, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-11]
90. rac1 rac1 7341 1.572 - - - - - 0.764 0.808 - -
91. rapgef2 ENSDARG00000005482 2586 1.566 - - - - - - 0.703 - 0.863 Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
92. ruvbl1 ENSDARG00000002591 2381 1.553 - - - - - 0.708 - - 0.845 RuvB-like AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-030109-2]
93. lsm6 ENSDARG00000036995 4377 1.549 - - - - - - 0.771 - 0.778 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
94. CABZ01072954.1 CABZ01072954.1 2330 1.546 - - - - - 0.827 0.719 - -
95. cdkn1c cdkn1c 17427 1.54 - - 0.812 - - - 0.728 - -
96. tufm ENSDARG00000104173 9292 1.538 - - - - - - 0.754 - 0.784 Tu translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050320-73]
97. sept9b ENSDARG00000103900, ENSDARG00000113442 1495 1.53 - - - - - 0.770 0.760 - - septin 9b [Source:ZFIN;Acc:ZDB-GENE-050327-17]
98. gars ENSDARG00000059070 17015 1.53 - - - - - 0.736 0.794 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
99. cmah ENSDARG00000057714 852 1.528 - - - - - 0.708 - - 0.820 cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:ZFIN;Acc:ZDB-GENE-040704-33]
100. alad ENSDARG00000100372 1711 1.526 - - - - - 0.810 0.716 - - aminolevulinate dehydratase [Source:ZFIN;Acc:ZDB-GENE-050417-123]

There are 2134 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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