Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ubr5

Gene Name Gene ID Reads Annotation
ubr5 ENSDARG00000018192 9267 ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]










Genes with expression patterns similar to ubr5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubr5 ENSDARG00000018192 9267 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
2. tmpob ENSDARG00000022978 8121 3.029 0.706 - 0.851 - - 0.742 0.730 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
3. actr1 ENSDARG00000011611 3879 2.523 - 0.798 - - 0.870 - 0.855 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
4. SSBP4 ENSDARG00000056483 5156 2.443 - 0.812 0.799 - - - 0.832 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
5. SERBP1 SERBP1 9276 2.436 - 0.776 - - 0.902 - 0.758 - -
6. ssbp3b ENSDARG00000030155 7163 2.417 - - - - 0.901 0.721 0.795 - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
7. si:dkey-42i9.4 ENSDARG00000008049 4752 2.411 - - - - 0.912 - - 0.740 0.759 si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
8. prmt1 ENSDARG00000010246 11311 2.406 0.732 0.893 0.781 - - - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
9. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.398 - - 0.762 - - 0.813 - 0.823 - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
10. MAP4K4 ENSDARG00000098670 4665 2.39 0.769 - 0.710 - 0.911 - - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
11. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.39 - 0.818 - 0.709 0.863 - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
12. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.387 - - 0.805 - 0.852 - 0.730 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
13. tmpoa ENSDARG00000007315 3638 2.384 - - 0.720 - 0.895 - 0.769 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
14. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 2.374 0.781 - - - 0.804 - 0.789 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
15. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 2.363 - 0.860 0.742 - - - - - 0.761 protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
16. foxp4 ENSDARG00000076120 9458 2.356 0.744 - 0.808 - - 0.804 - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
17. TAF15 ENSDARG00000070019 5102 2.341 - - 0.748 0.760 - - - 0.833 - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
18. ckap5 ENSDARG00000102674 5068 2.321 - - 0.762 - 0.846 0.713 - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
19. tmem198a ENSDARG00000042115 1694 2.302 - - 0.741 - 0.855 - - 0.706 - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
20. MAPRE2 ENSDARG00000099943 3041 2.302 - 0.796 - - - 0.771 0.735 - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
21. tgif1 ENSDARG00000059337 4020 2.299 - - 0.769 - - 0.803 0.727 - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
22. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 2.299 - 0.829 - - - 0.712 - - 0.758 casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
23. puf60a ENSDARG00000032175 5618 2.289 - 0.780 0.729 - - 0.780 - - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
24. lypla2 ENSDARG00000053656 8971 2.287 - 0.719 - - - 0.766 0.802 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
25. rbm4.3 ENSDARG00000022129 28571 2.284 - - - - 0.842 0.701 - 0.741 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
26. gipc1 ENSDARG00000104483 2913 2.283 - 0.738 0.815 - - - 0.730 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
27. meaf6 ENSDARG00000101216 6865 2.282 - - 0.743 - - - 0.826 0.713 - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
28. PWWP2A ENSDARG00000075526 2163 2.279 0.772 - 0.737 - - 0.770 - - - PWWP domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-131120-4]
29. sumo3a ENSDARG00000028119 13447 2.279 0.783 - - - - 0.711 0.785 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
30. smarce1 ENSDARG00000016871 9628 2.272 - - - 0.747 - - 0.759 0.766 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
31. hmgb1b ENSDARG00000030479 10398 2.272 - - 0.802 - - 0.768 0.702 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
32. KIF4A KIF4A 3322 2.259 - - 0.748 0.751 - - 0.760 - -
33. nr2f1a ENSDARG00000052695 5037 2.255 0.754 - - 0.744 - - - 0.757 - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
34. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.246 0.736 - 0.785 - - 0.725 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
35. emc1 ENSDARG00000057255 3582 2.243 - 0.763 - - - 0.723 0.757 - - ER membrane protein complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-98]
36. plxnb1b ENSDARG00000017211 4676 2.241 0.737 - - - - 0.741 0.763 - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
37. efnb3b ENSDARG00000042277 5823 2.23 - 0.753 - - 0.761 - 0.716 - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
38. mta2 ENSDARG00000013031 2932 2.225 - - 0.746 - - - 0.725 0.754 - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
39. ANKRD11 ENSDARG00000051886 10024 2.224 0.736 0.730 0.758 - - - - - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
40. u2af2b ENSDARG00000011740 6946 2.224 - - 0.795 - - - 0.714 0.715 - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
41. pl10 pl10 10795 2.22 - 0.759 - - - 0.713 - - 0.748
42. polr2a ENSDARG00000099966 5706 2.216 - - 0.737 0.758 - - - 0.721 - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
43. bcl2_1 bcl2_1 1185 2.2 0.738 - - - - 0.737 0.725 - -
44. gse1 ENSDARG00000062020 2337 2.192 - 0.724 0.750 - - - 0.718 - - Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
45. FP016176.1 FP016176.1 7030 2.19 0.723 0.723 - - - - 0.744 - -
46. CABZ01111990.1 CABZ01111990.1 4374 2.178 - 0.731 - - - - 0.708 0.739 -
47. kmt2bb ENSDARG00000060697 5230 2.177 - 0.708 0.758 - - 0.711 - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
48. si:ch73-21k16.6 si:ch73-21k16.6 4896 2.177 0.706 0.711 - - - - 0.760 - -
49. u2af2a ENSDARG00000012505 2920 2.176 - 0.710 0.736 - - - - 0.730 - U2 small nuclear RNA auxiliary factor 2a [Source:ZFIN;Acc:ZDB-GENE-050706-131]
50. eif3ja ENSDARG00000012603 6324 2.147 - 0.702 - - - 0.729 0.716 - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
51. nucks1a ENSDARG00000078473 28285 1.686 - 0.830 0.856 - - - - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
52. kdm1a ENSDARG00000060679 6152 1.678 - - 0.809 - - - 0.869 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
53. ctnnb1 ENSDARG00000014571 12004 1.672 - - 0.793 - 0.879 - - - - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
54. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.648 - - - - - - 0.786 0.862 - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
55. cdkn2aipnl ENSDARG00000053395 5107 1.636 - 0.832 0.804 - - - - - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
56. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.634 0.820 - - - - - 0.814 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
57. ilf3b ENSDARG00000105177 9473 1.632 - - - - - - 0.821 0.811 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
58. IM:7163548 IM:7163548 6540 1.627 - - 0.811 - 0.816 - - - -
59. h3f3a 66671 1.624 - - - - - - 0.810 0.814 - H3 histone, family 3A, transcript variant X1
60. stmn1b ENSDARG00000033655 9491 1.624 - - 0.736 - 0.888 - - - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
61. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.613 - 0.721 - - 0.892 - - - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
62. jarid2b ENSDARG00000062268 2206 1.612 - - 0.729 - 0.883 - - - - jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
63. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.61 - - - - - - 0.790 0.820 - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
64. sf3b4 ENSDARG00000018574 7470 1.604 - 0.762 0.842 - - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
65. CDCA4 ENSDARG00000042319 7918 1.6 - - - - 0.854 - - - 0.746 cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
66. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.599 - 0.770 - - 0.829 - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
67. si:ch73-86n18.1 ENSDARG00000056379, ENSDARG00000112771 2391 1.598 - 0.811 - - 0.787 - - - - si:ch73-86n18.1 [Source:ZFIN;Acc:ZDB-GENE-141216-19]
68. KDM6B KDM6B 10265 1.598 - - 0.785 - 0.813 - - - -
69. hnrnpub ENSDARG00000004735 16496 1.596 - - - - - 0.780 0.816 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
70. CCDC71 CCDC71 2442 1.595 - - 0.712 - - - 0.883 - -
71. eif2s3 ENSDARG00000008292 17051 1.594 - 0.884 - - - - - - 0.710 eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
72. hnrnpk ENSDARG00000018914 8841 1.59 - - - - 0.824 - 0.766 - - heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
73. sf1 ENSDARG00000008188 5142 1.583 - - 0.735 - 0.848 - - - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
74. arnt2 ENSDARG00000103697 5731 1.581 - - 0.785 - - - 0.796 - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
75. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.58 - - - - 0.822 - - - 0.758 alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
76. mrpl28 ENSDARG00000057805, ENSDARG00000109307, ENSDARG00000115867 1325 1.573 0.783 0.790 - - - - - - - mitochondrial ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-050522-113]
77. sart3 ENSDARG00000008032 2594 1.571 - - 0.782 - - - 0.789 - - squamous cell carcinoma antigen recognized by T cells 3 [Source:ZFIN;Acc:ZDB-GENE-040724-10]
78. dab2ipa ENSDARG00000069484 1138 1.571 - - - - - - 0.866 0.705 - DAB2 interacting protein a [Source:ZFIN;Acc:ZDB-GENE-081104-516]
79. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.571 - - 0.852 - - - - 0.719 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
80. hoxd4a ENSDARG00000059276 1516 1.569 - 0.749 - - - - 0.820 - - homeobox D4a [Source:ZFIN;Acc:ZDB-GENE-980526-214]
81. rbb4 rbb4 15541 1.567 - - 0.804 - - 0.763 - - -
82. glulb ENSDARG00000100003, ENSDARG00000113742 19292 1.566 0.743 - - - 0.823 - - - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
83. pitx2 ENSDARG00000036194 2279 1.564 - - - - 0.801 - - - 0.763 paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
84. si:ch211-197h24.6 ENSDARG00000091631 1933 1.563 - 0.759 - - 0.804 - - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
85. TNRC6A ENSDARG00000079688 14433 1.563 - - 0.833 - - - 0.730 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
86. cbx3a ENSDARG00000003860 4922 1.561 - 0.839 - - - - 0.722 - - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
87. hoxa9a ENSDARG00000105013 1509 1.56 - 0.815 - - - - 0.745 - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
88. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 1.559 - - - - 0.811 - - 0.748 - syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
89. cse1l ENSDARG00000006963 3261 1.557 - - 0.745 - - - 0.812 - - CSE1 chromosome segregation 1-like (yeast) [Source:ZFIN;Acc:ZDB-GENE-990603-1]
90. mxi1 ENSDARG00000040884, ENSDARG00000111950 3239 1.556 - - 0.731 - - - 0.825 - - max interactor 1, dimerization protein [Source:ZFIN;Acc:ZDB-GENE-990415-151]
91. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 1.555 - - - - 0.829 - 0.726 - - vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
92. gpm6ab ENSDARG00000004621 5825 1.553 - - - - 0.790 - - 0.763 - glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
93. ssbp4 ENSDARG00000056483 10196 1.553 - - - - - - 0.809 0.744 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
94. nmt1a ENSDARG00000052966 5918 1.553 - 0.748 - - 0.805 - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
95. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.551 - - 0.720 - - - 0.831 - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
96. ptpn21 ENSDARG00000062248 2010 1.545 - 0.790 - - - - - - 0.755 protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
97. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.544 - - 0.774 - - - 0.770 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
98. irf2bp2a ENSDARG00000004702 6719 1.543 - 0.793 - - 0.750 - - - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
99. adnp2b ENSDARG00000028431 4683 1.543 - 0.728 - - - - 0.815 - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
100. srrm1 ENSDARG00000001244 4972 1.541 - 0.762 0.779 - - - - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]

There are 1545 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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