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Results for ubr4

Gene Name Gene ID Reads Annotation
ubr4 ENSDARG00000009549 5565 ubiquitin protein ligase E3 component n-recognin 4 [Source:ZFIN;Acc:ZDB-GENE-090313-341]










Genes with expression patterns similar to ubr4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubr4 ENSDARG00000009549 5565 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3 component n-recognin 4 [Source:ZFIN;Acc:ZDB-GENE-090313-341]
2. erlin1 ENSDARG00000021991 5664 3.106 - - 0.845 - - 0.728 0.796 - 0.737 ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]
3. vta1 ENSDARG00000013732 6072 2.592 - - 0.871 - 0.972 - 0.749 - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
4. bag6 ENSDARG00000075892 3782 2.539 - 0.928 0.867 - - - - - 0.744 BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
5. agrn ENSDARG00000079388, ENSDARG00000110127 5806 2.506 - 0.935 - - - 0.753 0.818 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
6. bri3bp ENSDARG00000010108 6295 2.339 - - 0.863 - - - 0.735 - 0.741 bri3 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-5254]
7. atpif1a 6030 2.335 - - 0.862 - - 0.716 0.757 - - ATPase inhibitory factor 1a
8. vps35 ENSDARG00000008224 13245 2.309 - 0.823 - - - 0.735 0.751 - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
9. usp9 ENSDARG00000013708 9057 2.265 0.733 - - - - 0.759 0.773 - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
10. ppm1da ENSDARG00000009273 7713 2.256 - - 0.816 - - - 0.700 - 0.740 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
11. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 1.918 - 0.938 - - 0.980 - - - - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
12. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.887 - 0.945 - - 0.942 - - - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
13. fmr1 ENSDARG00000037433 5132 1.883 - 0.936 - - 0.947 - - - - fragile X mental retardation 1 [Source:ZFIN;Acc:ZDB-GENE-020731-6]
14. rc3h1 rc3h1 1087 1.87 - - - - 0.973 - - 0.897 -
15. ARHGAP23 ARHGAP23 3946 1.835 - - 0.869 - 0.966 - - - -
16. GATAD2B ENSDARG00000005834 3855 1.825 - 0.958 0.867 - - - - - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
17. ap2m1a ENSDARG00000002790 9781 1.821 - - 0.881 - 0.940 - - - - adaptor related protein complex 2 subunit mu 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9784]
18. zgc:101858 ENSDARG00000035129 1393 1.813 - 0.933 - - - - - 0.880 - zgc:101858 [Source:ZFIN;Acc:ZDB-GENE-040927-13]
19. sec14l1 ENSDARG00000098821, ENSDARG00000103991 1004 1.813 - 0.940 - - - - - 0.873 - SEC14-like lipid binding 1 [Source:ZFIN;Acc:ZDB-GENE-040426-801]
20. lman2lb ENSDARG00000088663 1641 1.809 - 0.950 - - - - - 0.859 - lectin, mannose-binding 2-like b [Source:ZFIN;Acc:ZDB-GENE-060929-256]
21. st14a ENSDARG00000061173 3800 1.807 - 0.962 0.845 - - - - - - suppression of tumorigenicity 14 (colon carcinoma) a [Source:ZFIN;Acc:ZDB-GENE-030131-6496]
22. aldh4a1 ENSDARG00000038207 4639 1.804 - 0.914 0.890 - - - - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
23. sgce ENSDARG00000012138 912 1.801 - 0.939 0.862 - - - - - - sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]
24. arih1 ENSDARG00000003616, ENSDARG00000109413 1739 1.8 - 0.945 0.855 - - - - - - ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5213]
25. gars ENSDARG00000059070 17015 1.792 - 0.928 - - 0.864 - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
26. zc3h15 ENSDARG00000015889 3861 1.792 - 0.950 - - - - 0.842 - - zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
27. cand1 ENSDARG00000017841 8164 1.784 - - - - 0.964 - 0.820 - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
28. gtf2f1 ENSDARG00000032129 3041 1.783 - 0.944 0.839 - - - - - - general transcription factor IIF, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4557]
29. C22H19orf44 C22H19orf44 481 1.772 - - 0.861 - - - - 0.911 -
30. tfdp1a ENSDARG00000019293, ENSDARG00000111589 1118 1.769 - - 0.852 - - - - 0.917 - transcription factor Dp-1, a [Source:ZFIN;Acc:ZDB-GENE-040426-2883]
31. slc1a4 ENSDARG00000000551 4298 1.766 - 0.948 0.818 - - - - - - solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-030616-566]
32. ass1 8099 1.752 - 0.959 0.793 - - - - - - argininosuccinate synthase 1
33. pdia5 ENSDARG00000069242 3576 1.747 - 0.956 - - - 0.791 - - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
34. nr2f6a ENSDARG00000003607 4779 1.74 - 0.970 - - - - - - 0.770 nuclear receptor subfamily 2, group F, member 6a [Source:ZFIN;Acc:ZDB-GENE-030131-4362]
35. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 1.728 - 0.945 - - - - - 0.783 - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
36. CU655970.1 CU655970.1 2123 1.719 - 0.936 - - - 0.783 - - -
37. uap1 ENSDARG00000052170 1168 1.717 - - - - 0.969 - - 0.748 - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1233]
38. cdc14b ENSDARG00000021483 4958 1.715 - 0.953 0.762 - - - - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
39. anapc16 ENSDARG00000013822 5857 1.711 - 0.968 - - - - 0.743 - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
40. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 1.707 - 0.956 - - - - - - 0.751 ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
41. wu:fb12e11 wu:fb12e11 2332 1.705 - 0.942 - - - - - 0.763 -
42. ftsjd2 ftsjd2 2694 1.704 - - - - 0.975 - - - 0.729
43. celsr1a ENSDARG00000069185 1894 1.699 - - 0.866 - - - - 0.833 - cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
44. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.697 - - 0.759 - 0.938 - - - - capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
45. znf395a ENSDARG00000060113 3874 1.693 - 0.956 - - - - 0.737 - - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
46. FP236813.1 FP236813.1 1842 1.689 0.744 0.945 - - - - - - -
47. kifc1 ENSDARG00000001558 6658 1.687 - - - - 0.931 - - - 0.756 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
48. clstn1 ENSDARG00000031720 5286 1.68 - - - - 0.901 - - - 0.779 calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
49. thbs3b ENSDARG00000012060 922 1.679 - - 0.864 - - - - 0.815 - thrombospondin 3b [Source:ZFIN;Acc:ZDB-GENE-060503-84]
50. PSIP1 PSIP1 5252 1.676 - - - - 0.935 - - - 0.741
51. gorasp2 ENSDARG00000015126 3923 1.674 - - - - 0.969 - 0.705 - - golgi reassembly stacking protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1659]
52. pdcd11 ENSDARG00000052480 2791 1.672 - - - - 0.971 - - - 0.701 programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
53. cct3 ENSDARG00000016173 15869 1.663 - 0.784 - - 0.879 - - - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
54. psma3 ENSDARG00000086618 6200 1.661 - - - - 0.948 - - - 0.713 proteasome subunit alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050913-120]
55. CASK CASK 1750 1.659 - 0.947 - - - - - - 0.712
56. akirin2 ENSDARG00000058729 13245 1.658 - 0.944 - - - 0.714 - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
57. ppp3ccb ENSDARG00000057456, ENSDARG00000116250 6265 1.658 - - 0.878 - - - 0.780 - - protein phosphatase 3, catalytic subunit, gamma isozyme, b [Source:ZFIN;Acc:ZDB-GENE-070112-1102]
58. ZPLXDC2 ZPLXDC2 1298 1.653 - - 0.856 - - - - 0.797 -
59. CR293507.1 ENSDARG00000112572 3198 1.651 - 0.943 - - - 0.708 - - -
60. rmnd5b ENSDARG00000043359 3054 1.65 - - - - 0.916 - - 0.734 - required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]
61. srsf5b ENSDARG00000027734 6996 1.649 - - 0.893 - - 0.756 - - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
62. snx16 ENSDARG00000046072 931 1.649 - 0.947 - 0.702 - - - - - sorting nexin 16 [Source:ZFIN;Acc:ZDB-GENE-040426-1832]
63. ube2h ENSDARG00000000019 9900 1.648 - 0.777 0.871 - - - - - - ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
64. tra2b ENSDARG00000002168 3218 1.648 - - 0.874 - - - 0.774 - - transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]
65. znf207a ENSDARG00000015538 2630 1.64 - - 0.860 - - - - - 0.780 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
66. PARL 2511 1.64 - - - - 0.933 - - - 0.707 presenilin associated rhomboid like
67. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.64 - 0.935 - - - - 0.705 - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
68. cox5ab ENSDARG00000099663 5689 1.631 - 0.921 - - - - 0.710 - - cytochrome c oxidase subunit 5Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5162]
69. pip5k1ab ENSDARG00000024642 1988 1.629 - - 0.874 - - - 0.755 - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]
70. chd9 ENSDARG00000074498, ENSDARG00000112964 2603 1.622 - - - - - 0.832 - - 0.790 chromodomain helicase DNA binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-497]
71. ptenb ENSDARG00000056623 5783 1.619 - - - - 0.843 0.776 - - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
72. znf644a ENSDARG00000101361 819 1.616 - - 0.887 - - - - 0.729 - zinc finger protein 644a [Source:ZFIN;Acc:ZDB-GENE-030131-6244]
73. setd8b 2528 1.611 - - 0.846 - - - 0.765 - - SET domain containing (lysine methyltransferase) 8b
74. ftr82 ENSDARG00000055647 3302 1.609 - 0.873 - - - - - 0.736 - finTRIM family, member 82 [Source:ZFIN;Acc:ZDB-GENE-030219-207]
75. hmgn3 ENSDARG00000036754, ENSDARG00000116728 11573 1.609 - - - - 0.886 - 0.723 - - high mobility group nucleosomal binding domain 3 [Source:ZFIN;Acc:ZDB-GENE-041114-180]
76. mpp5a ENSDARG00000006272 1181 1.604 - - - - - - 0.702 0.902 - membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5) [Source:ZFIN;Acc:ZDB-GENE-020712-1]
77. rab5c ENSDARG00000026712 4733 1.6 - - 0.876 - - - 0.724 - - RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
78. calr ENSDARG00000076290 13987 1.599 - - - - 0.855 0.744 - - - calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
79. pomp ENSDARG00000032296 4439 1.598 - - 0.846 - - - - - 0.752 proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
80. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.592 - - 0.875 - - - - - 0.717 eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
81. si:dkey-19h16.2 si:dkey-19h16.2 1077 1.592 - - - - - 0.729 - 0.863 -
82. GIGYF1 1830 1.59 - - - - - - 0.709 0.881 - GRB10 interacting GYF protein 1, transcript variant X6
83. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.589 - - 0.868 - - - - 0.721 - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
84. ppp3r1a ENSDARG00000092659 9729 1.588 - 0.866 - - - - - 0.722 - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
85. ncalda ENSDARG00000070688 5069 1.587 - - 0.866 - - - - - 0.721 neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
86. csnk1da ENSDARG00000008370 3469 1.587 - - - - - 0.767 0.820 - - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
87. si:dkey-19e4.5 ENSDARG00000089886 2562 1.586 - - 0.873 - - - - - 0.713 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
88. aqr ENSDARG00000016775 1581 1.586 - - 0.877 - - - - - 0.709 aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
89. ncoa2 ENSDARG00000017929 2520 1.585 - - 0.869 - - 0.716 - - - nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-010406-3]
90. plcg1 ENSDARG00000038442 5324 1.585 - - - - 0.840 - - - 0.745 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
91. eif3ea ENSDARG00000090697 14670 1.579 - 0.819 0.760 - - - - - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
92. ddah2 ENSDARG00000105009 4570 1.579 - - - - - 0.837 0.742 - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
93. sh3rf1 ENSDARG00000070470 1463 1.578 - - 0.869 - - - 0.709 - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
94. atp2a2b ENSDARG00000005122 2228 1.57 - - - - - - 0.769 0.801 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2b [Source:ZFIN;Acc:ZDB-GENE-030131-867]
95. CABZ01028296.1 CABZ01028296.1 6203 1.57 - - - - 0.814 - - - 0.756
96. mcrs1 ENSDARG00000020840 3232 1.565 - - - - - - - 0.776 0.789 microspherule protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2434]
97. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.564 - 0.810 - - - 0.754 - - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
98. mgst3 mgst3 3982 1.563 - - - - - 0.749 0.814 - -
99. syncripl ENSDARG00000026723 3889 1.563 - - 0.814 - - - - - 0.749 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
100. mcm4 ENSDARG00000040041 7971 1.562 - - 0.701 - 0.861 - - - - minichromosome maintenance complex component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9544]

There are 1341 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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