Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ubr2

Gene Name Gene ID Reads Annotation
ubr2 ENSDARG00000070164 3960 ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]










Genes with expression patterns similar to ubr2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubr2 ENSDARG00000070164 3960 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
2. ckap5 ENSDARG00000102674 5068 2.762 - 0.859 - - 0.946 - 0.957 - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
3. nmt1a ENSDARG00000052966 5918 2.63 - - - - 0.974 0.720 0.936 - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
4. hnrpkl ENSDARG00000007034 4660 2.558 - - 0.924 - - 0.700 0.934 - - heterogeneous nuclear ribonucleoprotein K, like [Source:ZFIN;Acc:ZDB-GENE-040426-1923]
5. TMEM185A TMEM185A 5505 2.44 - - 0.937 0.800 - 0.703 - - -
6. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 2.252 - - - 0.719 - 0.821 - 0.712 - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
7. wu:fc26g07 wu:fc26g07 1165 1.913 - - 0.944 - 0.969 - - - -
8. srm ENSDARG00000055760 6572 1.897 - - - - 0.952 - 0.945 - - spermidine synthase [Source:ZFIN;Acc:ZDB-GENE-040426-1183]
9. si:ch211-114l13.11 si:ch211-114l13.11 4727 1.892 - - 0.951 - - - 0.941 - -
10. kansl3 ENSDARG00000029556 2487 1.885 - - 0.948 - - - 0.937 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
11. gbas gbas 735 1.881 - - 0.949 - - - 0.932 - -
12. wdr82 ENSDARG00000014083 3159 1.872 - - 0.935 - - - 0.937 - - WD repeat domain 82 [Source:ZFIN;Acc:ZDB-GENE-030131-333]
13. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.87 - - 0.909 - - - 0.961 - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
14. actr10 ENSDARG00000038432 1598 1.862 - - 0.939 - - - 0.923 - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
15. yy1b ENSDARG00000027978 2669 1.858 - - 0.930 - - - 0.928 - - YY1 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2127]
16. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 1.849 - - 0.906 - - - 0.943 - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
17. hmgcrb ENSDARG00000105206 2080 1.842 - 0.896 0.946 - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
18. cdc42 ENSDARG00000044573 11795 1.833 - - - - 0.957 - 0.876 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
19. minos1 ENSDARG00000101619 5273 1.812 - - 0.858 - 0.954 - - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
20. CABZ01084579.1 CABZ01084579.1 7181 1.787 - - 0.837 - - - 0.950 - -
21. cdca5 ENSDARG00000044437 2041 1.786 - 0.845 0.941 - - - - - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
22. sptlc1 ENSDARG00000042995, ENSDARG00000112519 1291 1.778 - 0.806 - - 0.972 - - - - serine palmitoyltransferase, long chain base subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050522-61]
23. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.77 - 0.820 - - - - 0.950 - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
24. mad2l1 ENSDARG00000004713 3398 1.766 - - 0.915 - 0.851 - - - - MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
25. ttc13 ENSDARG00000063242 1360 1.757 - - - - 0.969 0.788 - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
26. chd4b ENSDARG00000025789 14299 1.732 - - - - 0.901 - 0.831 - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
27. mrpl32 ENSDARG00000060489 2728 1.731 - 0.812 - - - - 0.919 - - mitochondrial ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060825-188]
28. hsd11b3a hsd11b3a 1388 1.731 - 0.845 - - - - 0.886 - -
29. kdm4b ENSDARG00000099675 2037 1.73 - 0.769 - - - - 0.961 - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
30. rpz2 ENSDARG00000091215 765 1.729 - - - - - 0.814 0.915 - - rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
31. si:ch211-241o7.5 si:ch211-241o7.5 1387 1.725 - - - 0.797 - - 0.928 - -
32. vrk1 ENSDARG00000018006 1759 1.725 - - 0.934 0.791 - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
33. timm23 timm23 2712 1.723 - 0.778 - - - - 0.945 - -
34. wu:fb55g09 6015 1.722 - - - 0.766 0.956 - - - - wu:fb55g09
35. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 1.721 - 0.821 - - - - 0.900 - - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
36. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.721 - - 0.785 - 0.936 - - - - pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
37. USP2_1 USP2_1 544 1.72 - 0.748 - - 0.972 - - - -
38. emc6 ENSDARG00000035282 4981 1.719 - - - - - 0.789 0.930 - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
39. wtap ENSDARG00000042642 1779 1.713 - 0.815 - - - - 0.898 - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
40. rpz5 ENSDARG00000075718 1703 1.713 - - - 0.818 - - 0.895 - - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
41. CABZ01088039.1 CABZ01088039.1 2482 1.708 - - 0.926 - - - 0.782 - -
42. krcp ENSDARG00000040224 5961 1.707 - - - - - 0.802 0.905 - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
43. sprb ENSDARG00000058553 1694 1.705 - - 0.947 - - - - 0.758 - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]
44. tra2a ENSDARG00000007863 4449 1.704 - - - - 0.952 0.752 - - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
45. bin2b ENSDARG00000010255 2649 1.701 - 0.776 - - - - 0.925 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
46. idh3g ENSDARG00000023648 4877 1.699 - 0.780 - - - - 0.919 - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
47. sf1 ENSDARG00000008188 5142 1.697 - - - - 0.949 0.748 - - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
48. ptpn13 ENSDARG00000103699 2866 1.696 - - 0.961 - - 0.735 - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
49. tcp1 ENSDARG00000017891 7946 1.695 - - - - 0.899 - 0.796 - - t-complex 1 [Source:ZFIN;Acc:ZDB-GENE-990714-24]
50. gigfy2 3194 1.695 - - - - - 0.759 0.936 - - GRB10 interacting GYF protein 2, transcript variant X1
51. gga3 ENSDARG00000103667 675 1.695 - 0.744 0.951 - - - - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
52. strn3 ENSDARG00000001729 4608 1.693 - - 0.958 - - 0.735 - - - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
53. clgn ENSDARG00000009315 993 1.691 - - - - 0.965 0.726 - - - calmegin [Source:ZFIN;Acc:ZDB-GENE-060929-708]
54. ldb1a ENSDARG00000010137 3035 1.69 - - 0.921 0.769 - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
55. NUAK1_1 NUAK1_1 1782 1.688 - - - - - 0.779 0.909 - -
56. sec22ba ENSDARG00000030108 1273 1.686 - 0.748 - - - - 0.938 - - SEC22 homolog B, vesicle trafficking protein a [Source:ZFIN;Acc:ZDB-GENE-010724-3]
57. srsf5b ENSDARG00000027734 6996 1.685 - - - - - 0.787 0.898 - - serine/arginine-rich splicing factor 5b [Source:ZFIN;Acc:ZDB-GENE-040718-354]
58. eva1ba ENSDARG00000102701 1480 1.684 - 0.746 0.938 - - - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
59. fam89a ENSDARG00000079979 4375 1.679 - - - - 0.957 0.722 - - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
60. grk5 ENSDARG00000032801 490 1.676 - 0.752 - - - - 0.924 - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
61. nkx2.3 ENSDARG00000039095, ENSDARG00000113490 493 1.676 - - - 0.705 0.971 - - - - NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178]
62. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.675 - - - 0.705 0.970 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
63. suv420h2 2186 1.675 - - - 0.711 0.964 - - - - suppressor of variegation 4-20 homolog 2 (Drosophila)
64. CR548630.1 CR548630.1 3301 1.673 - - 0.918 0.755 - - - - -
65. mpzl3 959 1.671 - - - - - 0.740 0.931 - - myelin protein zero-like 3
66. bcat2 ENSDARG00000054849 4317 1.668 - 0.860 - - 0.808 - - - - branched chain amino-acid transaminase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-425]
67. sgcg_1 ENSDARG00000038107 1998 1.668 - 0.737 - - - - 0.931 - - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
68. pnkp ENSDARG00000100455, ENSDARG00000114060 1475 1.667 - 0.719 0.948 - - - - - - polynucleotide kinase 3'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-061013-433]
69. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.665 - - 0.933 0.732 - - - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
70. polb ENSDARG00000003749 2049 1.66 - 0.728 0.932 - - - - - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
71. ZFYVE1 ENSDARG00000078652 631 1.655 - 0.733 - - - - 0.922 - - zinc finger, FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-131205-1]
72. tbx2a ENSDARG00000018025, ENSDARG00000109541 1183 1.655 - - 0.947 0.708 - - - - - T-box 2a [Source:ZFIN;Acc:ZDB-GENE-990917-4]
73. atp6v1h ENSDARG00000006370 7028 1.651 - - 0.904 - - 0.747 - - - ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
74. DYNC1I2 DYNC1I2 4131 1.65 - - - - - - 0.931 - 0.719
75. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.648 - - - 0.773 - - 0.875 - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
76. sdpra sdpra 4594 1.647 - 0.723 - - - - 0.924 - -
77. qki2 ENSDARG00000010018 2230 1.643 - - 0.942 - - - - 0.701 - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
78. PDZD8 ENSDARG00000088699 844 1.64 - 0.720 - - - - 0.920 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
79. rac3b ENSDARG00000020795 1523 1.64 - - - 0.716 - - 0.924 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
80. fzr1 fzr1 2984 1.636 - - - - - 0.707 0.929 - -
81. snx7 ENSDARG00000105185 2977 1.635 - - - - - - 0.934 0.701 - sorting nexin 7 [Source:ZFIN;Acc:ZDB-GENE-040704-77]
82. eif4a3 ENSDARG00000102978 16162 1.634 - - - - 0.926 0.708 - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
83. IM:7163548 IM:7163548 6540 1.633 - - - - 0.898 0.735 - - -
84. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 1.631 - 0.778 - - - 0.853 - - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
85. zgc:92380 ENSDARG00000041339 1867 1.63 - 0.740 - - - - 0.890 - - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
86. si:dkey-42i9.4 ENSDARG00000008049 4752 1.629 - 0.723 - - 0.906 - - - - si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
87. pcnp ENSDARG00000037713 2754 1.628 - - 0.861 0.767 - - - - - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
88. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 1.623 - 0.777 - 0.846 - - - - - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
89. PRODH_1 PRODH_1 3400 1.619 - - - - - 0.757 0.862 - -
90. atp1a1a.1 ENSDARG00000002791 7392 1.618 - - 0.917 - - - - - 0.701 ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-001212-1]
91. efnb3b ENSDARG00000042277 5823 1.616 - - - - 0.914 0.702 - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
92. ppp2r5d ENSDARG00000014428 771 1.608 - 0.831 - - - 0.777 - - - protein phosphatase 2, regulatory subunit B', delta [Source:ZFIN;Acc:ZDB-GENE-040426-2568]
93. rab11al ENSDARG00000014340 2116 1.606 - 0.737 - - - - 0.869 - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
94. acbd3 ENSDARG00000042623 2643 1.596 - 0.713 - - - - 0.883 - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
95. prtfdc1 ENSDARG00000011683 1534 1.594 - - - - - 0.702 0.892 - - phosphoribosyl transferase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-980526-324]
96. emc8 ENSDARG00000017093 1947 1.591 - 0.796 - 0.795 - - - - - ER membrane protein complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2692]
97. max ENSDARG00000024844 6035 1.582 - - 0.862 0.720 - - - - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
98. prkcda ENSDARG00000009208 1508 1.581 - - - 0.742 - - 0.839 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
99. sc:d173 sc:d173 1279 1.578 - 0.706 - - - - 0.872 - -
100. proc proc 1038 1.576 - 0.833 - - - - 0.743 - -

There are 1695 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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